EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000014357 (Gene tree)
Gene ID: 103154291
Gene Symbol: polr1c
Alias: -
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 5663 bases
Position: chrKI519990.1:70173-75835
Accession: ZDB-GENE-040426-1495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000014424	RNA_pol_A_bac	PF01000.26	2.7e-32	1	1
ENSPFOP00000014424	RNA_pol_L	PF01193.24	1.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000014446	-	1074	-	ENSPFOP00000014424	357 (aa)	-	A0A087Y8S1

Gene Model

Click here to download ENSPFOG00000014357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000014357's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000014357	polr1c	98	100.000	ENSPFOG00000014342	POLR1C	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000014357	polr1c	98	72.650	ENSG00000171453	POLR1C	100	73.077	Homo_sapiens
ENSPFOG00000014357	polr1c	98	87.179	ENSAPOG00000024356	polr1c	100	87.179	Acanthochromis_polyacanthus
ENSPFOG00000014357	polr1c	99	73.011	ENSAMEG00000012205	POLR1C	99	72.727	Ailuropoda_melanoleuca
ENSPFOG00000014357	polr1c	93	78.550	ENSACIG00000016268	polr1c	91	78.550	Amphilophus_citrinellus
ENSPFOG00000014357	polr1c	100	86.275	ENSAOCG00000011687	polr1c	99	86.275	Amphiprion_ocellaris
ENSPFOG00000014357	polr1c	98	87.464	ENSAPEG00000002433	polr1c	100	87.464	Amphiprion_percula
ENSPFOG00000014357	polr1c	98	90.831	ENSATEG00000005985	polr1c	99	90.831	Anabas_testudineus
ENSPFOG00000014357	polr1c	85	71.711	ENSAPLG00000002908	POLR1C	100	71.382	Anas_platyrhynchos
ENSPFOG00000014357	polr1c	89	74.132	ENSACAG00000009764	POLR1C	89	73.817	Anolis_carolinensis
ENSPFOG00000014357	polr1c	98	72.934	ENSANAG00000025805	POLR1C	99	72.650	Aotus_nancymaae
ENSPFOG00000014357	polr1c	55	30.102	ENSACLG00000004854	polr2c	78	30.102	Astatotilapia_calliptera
ENSPFOG00000014357	polr1c	98	90.028	ENSACLG00000006573	polr1c	100	90.028	Astatotilapia_calliptera
ENSPFOG00000014357	polr1c	98	80.627	ENSAMXG00000012062	polr1c	99	80.342	Astyanax_mexicanus
ENSPFOG00000014357	polr1c	98	72.934	ENSBTAG00000018969	POLR1C	100	72.934	Bos_taurus
ENSPFOG00000014357	polr1c	98	44.505	WBGene00019275	rpac-40	97	43.956	Caenorhabditis_elegans
ENSPFOG00000014357	polr1c	98	72.080	ENSCJAG00000005594	POLR1C	100	71.795	Callithrix_jacchus
ENSPFOG00000014357	polr1c	98	72.365	ENSCAFG00000001872	POLR1C	100	72.080	Canis_familiaris
ENSPFOG00000014357	polr1c	98	72.365	ENSCAFG00020012018	POLR1C	100	72.080	Canis_lupus_dingo
ENSPFOG00000014357	polr1c	59	31.336	ENSCAFG00020007660	POLR2C	60	31.336	Canis_lupus_dingo
ENSPFOG00000014357	polr1c	98	72.934	ENSCHIG00000004352	POLR1C	100	72.650	Capra_hircus
ENSPFOG00000014357	polr1c	99	73.011	ENSTSYG00000011921	POLR1C	100	72.650	Carlito_syrichta
ENSPFOG00000014357	polr1c	85	74.257	ENSCAPG00000015364	POLR1C	88	73.927	Cavia_aperea
ENSPFOG00000014357	polr1c	98	73.789	ENSCPOG00000038098	POLR1C	100	73.504	Cavia_porcellus
ENSPFOG00000014357	polr1c	100	71.709	ENSCCAG00000020169	POLR1C	100	72.365	Cebus_capucinus
ENSPFOG00000014357	polr1c	99	72.443	ENSCATG00000044045	POLR1C	100	72.365	Cercocebus_atys
ENSPFOG00000014357	polr1c	98	74.074	ENSCLAG00000009266	POLR1C	100	73.789	Chinchilla_lanigera
ENSPFOG00000014357	polr1c	59	31.336	ENSCLAG00000013676	POLR2C	52	31.336	Chinchilla_lanigera
ENSPFOG00000014357	polr1c	98	71.510	ENSCSAG00000011913	POLR1C	100	71.510	Chlorocebus_sabaeus
ENSPFOG00000014357	polr1c	59	68.868	ENSCHOG00000006601	POLR1C	100	68.868	Choloepus_hoffmanni
ENSPFOG00000014357	polr1c	98	75.072	ENSCPBG00000025203	POLR1C	99	74.785	Chrysemys_picta_bellii
ENSPFOG00000014357	polr1c	96	54.386	ENSCING00000003563	-	97	54.386	Ciona_intestinalis
ENSPFOG00000014357	polr1c	99	72.443	ENSCANG00000043167	POLR1C	100	72.080	Colobus_angolensis_palliatus
ENSPFOG00000014357	polr1c	98	72.080	ENSCGRG00001017533	Polr1c	100	71.795	Cricetulus_griseus_chok1gshd
ENSPFOG00000014357	polr1c	85	72.277	ENSCGRG00000013225	Polr1c	100	71.947	Cricetulus_griseus_crigri
ENSPFOG00000014357	polr1c	98	84.330	ENSCSEG00000018097	polr1c	100	84.330	Cynoglossus_semilaevis
ENSPFOG00000014357	polr1c	59	94.340	ENSCVAG00000005684	polr1c	85	94.340	Cyprinodon_variegatus
ENSPFOG00000014357	polr1c	100	79.272	ENSDARG00000039400	polr1c	98	78.992	Danio_rerio
ENSPFOG00000014357	polr1c	98	72.080	ENSDNOG00000042693	POLR1C	100	71.795	Dasypus_novemcinctus
ENSPFOG00000014357	polr1c	98	72.650	ENSDORG00000000429	Polr1c	100	72.365	Dipodomys_ordii
ENSPFOG00000014357	polr1c	89	51.104	FBgn0031657	CG3756	93	50.789	Drosophila_melanogaster
ENSPFOG00000014357	polr1c	98	68.571	ENSETEG00000010807	POLR1C	99	68.571	Echinops_telfairi
ENSPFOG00000014357	polr1c	95	67.059	ENSEBUG00000013725	polr1c	98	66.279	Eptatretus_burgeri
ENSPFOG00000014357	polr1c	98	72.650	ENSEASG00005003338	POLR1C	100	72.365	Equus_asinus_asinus
ENSPFOG00000014357	polr1c	99	72.727	ENSECAG00000023516	POLR1C	99	72.443	Equus_caballus
ENSPFOG00000014357	polr1c	98	73.352	ENSEEUG00000005471	POLR1C	99	73.066	Erinaceus_europaeus
ENSPFOG00000014357	polr1c	98	79.772	ENSELUG00000013027	polr1c	100	79.487	Esox_lucius
ENSPFOG00000014357	polr1c	98	72.650	ENSFCAG00000009735	POLR1C	100	72.365	Felis_catus
ENSPFOG00000014357	polr1c	92	71.865	ENSFALG00000012111	POLR1C	100	71.560	Ficedula_albicollis
ENSPFOG00000014357	polr1c	98	73.789	ENSFDAG00000008428	POLR1C	100	73.504	Fukomys_damarensis
ENSPFOG00000014357	polr1c	98	80.627	ENSFHEG00000000262	polr1c	100	81.197	Fundulus_heteroclitus
ENSPFOG00000014357	polr1c	92	81.098	ENSGMOG00000013878	polr1c	100	80.488	Gadus_morhua
ENSPFOG00000014357	polr1c	98	72.934	ENSGALG00000010349	POLR1C	100	72.650	Gallus_gallus
ENSPFOG00000014357	polr1c	98	98.006	ENSGAFG00000010153	polr1c	100	98.006	Gambusia_affinis
ENSPFOG00000014357	polr1c	98	85.185	ENSGACG00000002453	polr1c	100	85.185	Gasterosteus_aculeatus
ENSPFOG00000014357	polr1c	97	74.566	ENSGAGG00000010640	POLR1C	99	74.277	Gopherus_agassizii
ENSPFOG00000014357	polr1c	99	72.727	ENSGGOG00000010903	POLR1C	100	72.365	Gorilla_gorilla
ENSPFOG00000014357	polr1c	55	30.102	ENSHBUG00000023040	polr2c	78	30.102	Haplochromis_burtoni
ENSPFOG00000014357	polr1c	98	79.487	ENSHBUG00000017816	polr1c	100	78.917	Haplochromis_burtoni
ENSPFOG00000014357	polr1c	98	72.934	ENSHGLG00000019441	POLR1C	100	72.650	Heterocephalus_glaber_female
ENSPFOG00000014357	polr1c	98	73.219	ENSHGLG00100005970	POLR1C	100	72.934	Heterocephalus_glaber_male
ENSPFOG00000014357	polr1c	98	81.089	ENSHCOG00000002179	polr1c	99	81.089	Hippocampus_comes
ENSPFOG00000014357	polr1c	98	80.802	ENSIPUG00000024464	polr1c	99	80.516	Ictalurus_punctatus
ENSPFOG00000014357	polr1c	98	72.934	ENSSTOG00000010631	POLR1C	100	72.650	Ictidomys_tridecemlineatus
ENSPFOG00000014357	polr1c	59	31.336	ENSSTOG00000015150	-	50	31.336	Ictidomys_tridecemlineatus
ENSPFOG00000014357	polr1c	98	72.934	ENSJJAG00000023110	Polr1c	100	72.650	Jaculus_jaculus
ENSPFOG00000014357	polr1c	99	92.045	ENSKMAG00000014305	polr1c	98	92.045	Kryptolebias_marmoratus
ENSPFOG00000014357	polr1c	98	88.319	ENSLBEG00000014925	polr1c	100	88.319	Labrus_bergylta
ENSPFOG00000014357	polr1c	93	59.524	ENSLACG00000012567	POLR1C	98	59.226	Latimeria_chalumnae
ENSPFOG00000014357	polr1c	99	77.337	ENSLOCG00000016710	polr1c	96	77.054	Lepisosteus_oculatus
ENSPFOG00000014357	polr1c	85	72.787	ENSLAFG00000026248	POLR1C	100	72.787	Loxodonta_africana
ENSPFOG00000014357	polr1c	59	31.336	ENSLAFG00000027230	POLR2C	74	31.336	Loxodonta_africana
ENSPFOG00000014357	polr1c	99	72.159	ENSMFAG00000046295	POLR1C	100	72.080	Macaca_fascicularis
ENSPFOG00000014357	polr1c	59	31.336	ENSMFAG00000016861	POLR2C	60	30.939	Macaca_fascicularis
ENSPFOG00000014357	polr1c	98	72.080	ENSMMUG00000015192	POLR1C	100	72.080	Macaca_mulatta
ENSPFOG00000014357	polr1c	59	31.336	ENSMMUG00000020474	POLR2C	60	30.939	Macaca_mulatta
ENSPFOG00000014357	polr1c	99	72.159	ENSMNEG00000028073	POLR1C	100	72.080	Macaca_nemestrina
ENSPFOG00000014357	polr1c	99	72.159	ENSMLEG00000034818	POLR1C	100	72.080	Mandrillus_leucophaeus
ENSPFOG00000014357	polr1c	98	89.459	ENSMAMG00000008700	polr1c	100	89.459	Mastacembelus_armatus
ENSPFOG00000014357	polr1c	98	89.744	ENSMZEG00005018545	polr1c	100	89.744	Maylandia_zebra
ENSPFOG00000014357	polr1c	83	68.475	ENSMGAG00000011020	POLR1C	100	68.136	Meleagris_gallopavo
ENSPFOG00000014357	polr1c	98	72.080	ENSMAUG00000014329	Polr1c	100	71.795	Mesocricetus_auratus
ENSPFOG00000014357	polr1c	59	30.516	ENSMICG00000045178	POLR2C	73	30.516	Microcebus_murinus
ENSPFOG00000014357	polr1c	99	71.591	ENSMICG00000005027	POLR1C	100	71.225	Microcebus_murinus
ENSPFOG00000014357	polr1c	59	31.628	ENSMOCG00000013652	Polr2c	73	31.628	Microtus_ochrogaster
ENSPFOG00000014357	polr1c	98	72.650	ENSMOCG00000017549	Polr1c	100	72.365	Microtus_ochrogaster
ENSPFOG00000014357	polr1c	98	69.516	ENSMMOG00000005380	polr1c	100	70.085	Mola_mola
ENSPFOG00000014357	polr1c	83	73.559	ENSMODG00000018964	POLR1C	100	73.559	Monodelphis_domestica
ENSPFOG00000014357	polr1c	98	74.074	ENSMALG00000011711	polr1c	100	74.644	Monopterus_albus
ENSPFOG00000014357	polr1c	98	63.818	MGP_CAROLIEiJ_G0021662	Polr1c	100	70.455	Mus_caroli
ENSPFOG00000014357	polr1c	98	72.365	ENSMUSG00000067148	Polr1c	99	75.728	Mus_musculus
ENSPFOG00000014357	polr1c	98	72.934	MGP_PahariEiJ_G0020654	Polr1c	99	76.699	Mus_pahari
ENSPFOG00000014357	polr1c	98	72.365	MGP_SPRETEiJ_G0022574	Polr1c	99	75.728	Mus_spretus
ENSPFOG00000014357	polr1c	99	72.727	ENSMPUG00000012916	POLR1C	91	72.443	Mustela_putorius_furo
ENSPFOG00000014357	polr1c	99	73.011	ENSMLUG00000017751	POLR1C	100	72.727	Myotis_lucifugus
ENSPFOG00000014357	polr1c	98	72.650	ENSNGAG00000023487	Polr1c	100	72.365	Nannospalax_galili
ENSPFOG00000014357	polr1c	98	89.744	ENSNBRG00000018742	polr1c	100	89.744	Neolamprologus_brichardi
ENSPFOG00000014357	polr1c	98	72.365	ENSNLEG00000004035	POLR1C	100	72.080	Nomascus_leucogenys
ENSPFOG00000014357	polr1c	98	62.178	ENSMEUG00000006778	POLR1C	99	62.178	Notamacropus_eugenii
ENSPFOG00000014357	polr1c	76	72.894	ENSOPRG00000000145	POLR1C	100	72.894	Ochotona_princeps
ENSPFOG00000014357	polr1c	61	70.320	ENSODEG00000017109	-	97	71.226	Octodon_degus
ENSPFOG00000014357	polr1c	98	73.789	ENSODEG00000015831	-	100	73.504	Octodon_degus
ENSPFOG00000014357	polr1c	99	89.888	ENSONIG00000013133	polr1c	99	89.888	Oreochromis_niloticus
ENSPFOG00000014357	polr1c	98	70.487	ENSOANG00000003043	POLR1C	99	70.201	Ornithorhynchus_anatinus
ENSPFOG00000014357	polr1c	59	31.797	ENSOCUG00000014984	POLR2C	73	31.797	Oryctolagus_cuniculus
ENSPFOG00000014357	polr1c	99	71.875	ENSOCUG00000005504	POLR1C	100	71.591	Oryctolagus_cuniculus
ENSPFOG00000014357	polr1c	97	86.455	ENSORLG00000019743	polr1c	99	86.455	Oryzias_latipes
ENSPFOG00000014357	polr1c	76	67.391	ENSORLG00020005555	polr1c	81	67.391	Oryzias_latipes_hni
ENSPFOG00000014357	polr1c	97	87.032	ENSORLG00020006489	POLR1C	99	87.032	Oryzias_latipes_hni
ENSPFOG00000014357	polr1c	97	86.167	ENSORLG00015013322	polr1c	99	86.167	Oryzias_latipes_hsok
ENSPFOG00000014357	polr1c	97	86.705	ENSOMEG00000016527	polr1c	99	86.705	Oryzias_melastigma
ENSPFOG00000014357	polr1c	59	30.986	ENSOGAG00000016866	POLR2C	73	30.986	Otolemur_garnettii
ENSPFOG00000014357	polr1c	98	72.206	ENSOGAG00000016318	POLR1C	99	71.633	Otolemur_garnettii
ENSPFOG00000014357	polr1c	98	72.650	ENSOARG00000007503	POLR1C	100	72.650	Ovis_aries
ENSPFOG00000014357	polr1c	99	72.727	ENSPPAG00000043678	POLR1C	100	72.365	Pan_paniscus
ENSPFOG00000014357	polr1c	98	72.934	ENSPPRG00000009760	POLR1C	100	72.650	Panthera_pardus
ENSPFOG00000014357	polr1c	98	72.934	ENSPTIG00000014813	POLR1C	100	72.650	Panthera_tigris_altaica
ENSPFOG00000014357	polr1c	99	72.727	ENSPTRG00000018202	POLR1C	100	72.365	Pan_troglodytes
ENSPFOG00000014357	polr1c	99	72.443	ENSPANG00000009025	POLR1C	99	72.443	Papio_anubis
ENSPFOG00000014357	polr1c	98	78.632	ENSPKIG00000009858	polr1c	100	78.348	Paramormyrops_kingsleyae
ENSPFOG00000014357	polr1c	99	74.432	ENSPSIG00000012580	POLR1C	95	74.148	Pelodiscus_sinensis
ENSPFOG00000014357	polr1c	98	71.510	ENSPMGG00000012121	polr1c	100	71.510	Periophthalmus_magnuspinnatus
ENSPFOG00000014357	polr1c	98	72.080	ENSPEMG00000006970	Polr1c	100	71.795	Peromyscus_maniculatus_bairdii
ENSPFOG00000014357	polr1c	97	70.000	ENSPMAG00000005560	polr1c	99	69.714	Petromyzon_marinus
ENSPFOG00000014357	polr1c	55	34.653	ENSPMAG00000004827	polr2c	81	34.653	Petromyzon_marinus
ENSPFOG00000014357	polr1c	99	74.221	ENSPCIG00000028137	POLR1C	99	74.221	Phascolarctos_cinereus
ENSPFOG00000014357	polr1c	62	100.000	ENSPLAG00000004111	polr1c	93	100.000	Poecilia_latipinna
ENSPFOG00000014357	polr1c	98	100.000	ENSPMEG00000011877	-	100	100.000	Poecilia_mexicana
ENSPFOG00000014357	polr1c	98	100.000	ENSPMEG00000008420	polr1c	100	100.000	Poecilia_mexicana
ENSPFOG00000014357	polr1c	98	97.721	ENSPREG00000007985	polr1c	100	97.721	Poecilia_reticulata
ENSPFOG00000014357	polr1c	98	72.365	ENSPPYG00000016645	POLR1C	100	72.080	Pongo_abelii
ENSPFOG00000014357	polr1c	98	71.225	ENSPCOG00000024628	POLR1C	100	70.940	Propithecus_coquereli
ENSPFOG00000014357	polr1c	59	30.516	ENSPCOG00000017282	POLR2C	72	30.806	Propithecus_coquereli
ENSPFOG00000014357	polr1c	98	67.521	ENSPVAG00000005689	POLR1C	100	67.521	Pteropus_vampyrus
ENSPFOG00000014357	polr1c	98	89.744	ENSPNYG00000003620	polr1c	100	89.744	Pundamilia_nyererei
ENSPFOG00000014357	polr1c	98	82.051	ENSPNAG00000008443	polr1c	100	81.766	Pygocentrus_nattereri
ENSPFOG00000014357	polr1c	98	72.080	ENSRNOG00000019079	Polr1c	100	71.795	Rattus_norvegicus
ENSPFOG00000014357	polr1c	99	72.727	ENSRBIG00000007155	POLR1C	100	72.365	Rhinopithecus_bieti
ENSPFOG00000014357	polr1c	99	72.443	ENSRROG00000000257	POLR1C	100	72.080	Rhinopithecus_roxellana
ENSPFOG00000014357	polr1c	90	47.205	YPR110C	RPC40	95	47.205	Saccharomyces_cerevisiae
ENSPFOG00000014357	polr1c	99	71.549	ENSSBOG00000025735	POLR1C	99	73.077	Saimiri_boliviensis_boliviensis
ENSPFOG00000014357	polr1c	98	66.762	ENSSHAG00000014456	POLR1C	99	66.762	Sarcophilus_harrisii
ENSPFOG00000014357	polr1c	98	80.627	ENSSFOG00015019860	polr1c	100	80.342	Scleropages_formosus
ENSPFOG00000014357	polr1c	98	87.749	ENSSMAG00000018865	polr1c	100	87.749	Scophthalmus_maximus
ENSPFOG00000014357	polr1c	99	89.831	ENSSDUG00000015745	polr1c	92	89.831	Seriola_dumerili
ENSPFOG00000014357	polr1c	99	89.548	ENSSLDG00000018285	polr1c	92	89.548	Seriola_lalandi_dorsalis
ENSPFOG00000014357	polr1c	97	72.832	ENSSPUG00000011822	POLR1C	99	72.543	Sphenodon_punctatus
ENSPFOG00000014357	polr1c	98	88.319	ENSSPAG00000022369	polr1c	100	88.319	Stegastes_partitus
ENSPFOG00000014357	polr1c	99	72.443	ENSSSCG00000028007	POLR1C	99	72.159	Sus_scrofa
ENSPFOG00000014357	polr1c	95	72.271	ENSTGUG00000009159	POLR1C	99	71.976	Taeniopygia_guttata
ENSPFOG00000014357	polr1c	98	84.330	ENSTRUG00000006264	polr1c	100	84.330	Takifugu_rubripes
ENSPFOG00000014357	polr1c	50	71.910	ENSTBEG00000002254	POLR1C	100	71.910	Tupaia_belangeri
ENSPFOG00000014357	polr1c	75	69.663	ENSTTRG00000006344	POLR1C	76	69.288	Tursiops_truncatus
ENSPFOG00000014357	polr1c	98	72.934	ENSUAMG00000025602	POLR1C	100	72.650	Ursus_americanus
ENSPFOG00000014357	polr1c	98	72.934	ENSUMAG00000005938	POLR1C	100	72.650	Ursus_maritimus
ENSPFOG00000014357	polr1c	98	70.085	ENSVVUG00000028922	POLR1C	100	70.085	Vulpes_vulpes
ENSPFOG00000014357	polr1c	98	67.705	ENSXETG00000010882	polr1c	100	67.045	Xenopus_tropicalis
ENSPFOG00000014357	polr1c	98	97.436	ENSXCOG00000014185	polr1c	100	97.436	Xiphophorus_couchianus
ENSPFOG00000014357	polr1c	98	98.291	ENSXMAG00000015076	polr1c	100	98.291	Xiphophorus_maculatus