EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000014418 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-13
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 36633 bases
Position: chrKI519687.1:393424-430056
Accession: 103140786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000014456	MMR_HSR1	PF01926.23	6.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000014478	-	3202	-	ENSPFOP00000014456	200 (aa)	XP_007556138	A0A087Y8V3

Gene Model

Click here to download ENSPFOG00000014418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000014418's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000014418	-	85	45.349	ENSPFOG00000004492	RAB39B	81	45.349
ENSPFOG00000014418	-	88	37.989	ENSPFOG00000003934	-	86	37.989
ENSPFOG00000014418	-	83	44.848	ENSPFOG00000001167	-	77	44.848
ENSPFOG00000014418	-	95	42.347	ENSPFOG00000013491	rab18b	93	42.347
ENSPFOG00000014418	-	85	49.704	ENSPFOG00000005479	rab30	83	49.704
ENSPFOG00000014418	-	97	41.951	ENSPFOG00000009284	rab11a	95	41.951
ENSPFOG00000014418	-	81	38.272	ENSPFOG00000015499	kras	85	38.272
ENSPFOG00000014418	-	77	36.364	ENSPFOG00000004921	rheb	84	36.364
ENSPFOG00000014418	-	87	41.954	ENSPFOG00000005901	-	77	41.954
ENSPFOG00000014418	-	80	49.686	ENSPFOG00000024114	-	73	49.686
ENSPFOG00000014418	-	69	35.507	ENSPFOG00000024387	rras2	80	35.507
ENSPFOG00000014418	-	73	45.695	ENSPFOG00000022360	-	63	45.695
ENSPFOG00000014418	-	80	42.683	ENSPFOG00000009101	-	70	42.683
ENSPFOG00000014418	-	78	40.000	ENSPFOG00000024704	rab9a	79	40.000
ENSPFOG00000014418	-	84	52.381	ENSPFOG00000001579	rab12	70	51.163
ENSPFOG00000014418	-	79	44.304	ENSPFOG00000011424	RAB41	75	44.304
ENSPFOG00000014418	-	95	52.792	ENSPFOG00000013810	zgc:171927	91	52.792
ENSPFOG00000014418	-	85	54.386	ENSPFOG00000006655	rab35b	100	48.293
ENSPFOG00000014418	-	81	32.000	ENSPFOG00000003006	rasl11a	67	32.000
ENSPFOG00000014418	-	96	41.146	ENSPFOG00000011310	rab25b	92	41.146
ENSPFOG00000014418	-	84	46.429	ENSPFOG00000011316	rab11al	78	46.429
ENSPFOG00000014418	-	86	45.349	ENSPFOG00000014630	rab4a	81	45.349
ENSPFOG00000014418	-	83	43.373	ENSPFOG00000019821	RAB14	77	43.373
ENSPFOG00000014418	-	58	30.769	ENSPFOG00000012486	arl3	62	30.769
ENSPFOG00000014418	-	79	36.420	ENSPFOG00000015409	si:dkey-13a21.4	79	36.420
ENSPFOG00000014418	-	84	40.230	ENSPFOG00000020060	rab9b	85	40.230
ENSPFOG00000014418	-	91	32.432	ENSPFOG00000008678	si:cabz01085950.1	90	32.432
ENSPFOG00000014418	-	86	33.714	ENSPFOG00000017960	rabl2	78	33.714
ENSPFOG00000014418	-	81	37.423	ENSPFOG00000000601	si:ch73-116o1.2	94	35.204
ENSPFOG00000014418	-	98	53.535	ENSPFOG00000001829	rab1ab	98	53.535
ENSPFOG00000014418	-	80	49.686	ENSPFOG00000006224	-	73	49.686
ENSPFOG00000014418	-	95	35.789	ENSPFOG00000012977	rab22a	97	35.789
ENSPFOG00000014418	-	79	39.873	ENSPFOG00000013027	rab22a	96	39.873
ENSPFOG00000014418	-	81	42.236	ENSPFOG00000023458	rab5c	73	42.236
ENSPFOG00000014418	-	78	33.544	ENSPFOG00000020033	rasd4	83	33.544
ENSPFOG00000014418	-	80	49.057	ENSPFOG00000006159	rab11ba	73	49.057
ENSPFOG00000014418	-	79	39.375	ENSPFOG00000008547	rab34a	52	39.375
ENSPFOG00000014418	-	84	48.214	ENSPFOG00000004786	rab2a	79	48.214
ENSPFOG00000014418	-	83	42.012	ENSPFOG00000014499	si:dkey-34d22.5	76	42.012
ENSPFOG00000014418	-	95	40.104	ENSPFOG00000011263	rab5aa	89	40.104
ENSPFOG00000014418	-	96	42.487	ENSPFOG00000006314	-	79	42.487
ENSPFOG00000014418	-	87	39.583	ENSPFOG00000000349	rab33ba	79	39.583
ENSPFOG00000014418	-	96	35.052	ENSPFOG00000008890	rras	85	35.052
ENSPFOG00000014418	-	84	35.632	ENSPFOG00000013066	RAB29	83	35.632
ENSPFOG00000014418	-	94	38.830	ENSPFOG00000010632	rab25a	87	38.830
ENSPFOG00000014418	-	85	36.686	ENSPFOG00000011493	rab23	77	36.464
ENSPFOG00000014418	-	85	44.767	ENSPFOG00000004684	-	81	44.767
ENSPFOG00000014418	-	90	56.425	ENSPFOG00000000498	-	86	56.425
ENSPFOG00000014418	-	92	40.513	ENSPFOG00000004037	rab33a	68	40.513
ENSPFOG00000014418	-	96	33.333	ENSPFOG00000001515	rhebl1	96	33.333
ENSPFOG00000014418	-	79	39.375	ENSPFOG00000011444	rab34b	63	39.375
ENSPFOG00000014418	-	96	42.487	ENSPFOG00000019144	-	79	42.487
ENSPFOG00000014418	-	97	53.368	ENSPFOG00000012594	rab1ba	86	53.368
ENSPFOG00000014418	-	88	35.556	ENSPFOG00000002595	hrasb	94	35.754
ENSPFOG00000014418	-	91	47.802	ENSPFOG00000004746	si:dkey-16l2.16	87	47.802
ENSPFOG00000014418	-	85	43.023	ENSPFOG00000004838	rab42a	65	43.023
ENSPFOG00000014418	-	88	55.429	ENSPFOG00000017775	rab15	82	55.429
ENSPFOG00000014418	-	58	30.769	ENSPFOG00000012426	arl3	58	30.769
ENSPFOG00000014418	-	81	42.236	ENSPFOG00000012082	rab5c	73	42.236
ENSPFOG00000014418	-	82	41.071	ENSPFOG00000022477	-	76	41.071
ENSPFOG00000014418	-	90	43.784	ENSPFOG00000007571	rab18a	88	43.784
ENSPFOG00000014418	-	85	30.337	ENSPFOG00000006335	dnajc27	65	30.337
ENSPFOG00000014418	-	88	37.989	ENSPFOG00000003465	RAB7A	86	37.989
ENSPFOG00000014418	-	79	44.304	ENSPFOG00000003742	rab6ba	76	44.304
ENSPFOG00000014418	-	94	41.489	ENSPFOG00000019509	rab6a	89	41.489
ENSPFOG00000014418	-	85	55.882	ENSPFOG00000013182	RAB15	81	55.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000014418	-	100	93.500	ENSAPOG00000001040	-	100	93.500	Acanthochromis_polyacanthus
ENSPFOG00000014418	-	100	65.174	ENSACIG00000003157	-	100	65.174	Amphilophus_citrinellus
ENSPFOG00000014418	-	100	93.500	ENSAOCG00000015908	-	100	93.500	Amphiprion_ocellaris
ENSPFOG00000014418	-	100	93.500	ENSAPEG00000004121	-	100	93.500	Amphiprion_percula
ENSPFOG00000014418	-	100	90.500	ENSATEG00000023662	-	100	90.500	Anabas_testudineus
ENSPFOG00000014418	-	100	92.500	ENSACLG00000019643	-	100	92.500	Astatotilapia_calliptera
ENSPFOG00000014418	-	100	96.500	ENSCVAG00000022649	-	100	96.500	Cyprinodon_variegatus
ENSPFOG00000014418	-	86	73.256	ENSDARG00000103934	megf8	99	73.256	Danio_rerio
ENSPFOG00000014418	-	100	97.500	ENSGAFG00000014787	-	100	97.500	Gambusia_affinis
ENSPFOG00000014418	-	100	92.500	ENSHBUG00000003728	-	100	92.500	Haplochromis_burtoni
ENSPFOG00000014418	-	100	92.500	ENSMZEG00005015817	-	100	92.500	Maylandia_zebra
ENSPFOG00000014418	-	100	92.500	ENSMMOG00000003924	-	100	92.500	Mola_mola
ENSPFOG00000014418	-	100	93.500	ENSMALG00000020807	-	100	93.500	Monopterus_albus
ENSPFOG00000014418	-	54	90.741	ENSOPRG00000014416	-	100	90.741	Ochotona_princeps
ENSPFOG00000014418	-	100	88.000	ENSORLG00000025395	-	100	88.000	Oryzias_latipes
ENSPFOG00000014418	-	100	88.000	ENSORLG00020009535	-	100	88.000	Oryzias_latipes_hni
ENSPFOG00000014418	-	100	88.500	ENSORLG00015015518	-	100	88.500	Oryzias_latipes_hsok
ENSPFOG00000014418	-	100	86.567	ENSPKIG00000014528	-	100	86.567	Paramormyrops_kingsleyae
ENSPFOG00000014418	-	100	100.000	ENSPLAG00000003181	-	100	100.000	Poecilia_latipinna
ENSPFOG00000014418	-	100	100.000	ENSPMEG00000022988	-	100	100.000	Poecilia_mexicana
ENSPFOG00000014418	-	100	100.000	ENSPMEG00000008020	-	100	100.000	Poecilia_mexicana
ENSPFOG00000014418	-	100	92.000	ENSPNYG00000004681	-	100	92.000	Pundamilia_nyererei
ENSPFOG00000014418	-	100	87.500	ENSSFOG00015021754	rab13	100	87.500	Scleropages_formosus
ENSPFOG00000014418	-	100	92.000	ENSSMAG00000016376	-	100	92.000	Scophthalmus_maximus
ENSPFOG00000014418	-	100	65.700	ENSSMAG00000002569	-	100	65.700	Scophthalmus_maximus
ENSPFOG00000014418	-	100	94.000	ENSSDUG00000006307	-	100	94.000	Seriola_dumerili
ENSPFOG00000014418	-	100	94.000	ENSSLDG00000015823	-	100	94.000	Seriola_lalandi_dorsalis
ENSPFOG00000014418	-	100	94.000	ENSSPAG00000022440	-	100	94.000	Stegastes_partitus
ENSPFOG00000014418	-	100	91.000	ENSTNIG00000018319	-	100	91.000	Tetraodon_nigroviridis
ENSPFOG00000014418	-	100	98.000	ENSXMAG00000016094	-	100	98.000	Xiphophorus_maculatus