EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000014471 (Gene tree)
Gene ID: 103145072
Gene Symbol: mbd4
Alias: -
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 5300 bases
Position: chrKI519745.1:971662-976961
Accession: 103145072
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000014496	MBD	PF01429.19	2.3e-16	1	1
ENSPFOP00000027239	MBD	PF01429.19	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000029379	-	2938	-	ENSPFOP00000027239	435 (aa)	-	A0A096M748
ENSPFOT00000014518	-	2992	-	ENSPFOP00000014496	453 (aa)	XP_007562399	A0A087Y8Z3

Gene Model

Click here to download ENSPFOG00000014471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000014471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000014471	mbd4	54	78.363	ENSG00000129071	MBD4	75	71.212	Homo_sapiens
ENSPFOG00000014471	mbd4	98	62.971	ENSAPOG00000021668	mbd4	95	62.971	Acanthochromis_polyacanthus
ENSPFOG00000014471	mbd4	98	61.778	ENSAOCG00000001157	mbd4	95	61.778	Amphiprion_ocellaris
ENSPFOG00000014471	mbd4	98	62.222	ENSAPEG00000016131	mbd4	95	62.222	Amphiprion_percula
ENSPFOG00000014471	mbd4	98	62.857	ENSATEG00000014594	MBD4	86	62.857	Anabas_testudineus
ENSPFOG00000014471	mbd4	98	48.260	ENSAMXG00000017271	mbd4	81	63.115	Astyanax_mexicanus
ENSPFOG00000014471	mbd4	54	77.778	ENSCANG00000007120	MBD4	50	62.376	Colobus_angolensis_palliatus
ENSPFOG00000014471	mbd4	86	37.123	ENSDORG00000000902	-	90	37.705	Dipodomys_ordii
ENSPFOG00000014471	mbd4	54	64.912	ENSEBUG00000010816	mbd4	52	65.680	Eptatretus_burgeri
ENSPFOG00000014471	mbd4	98	58.140	ENSELUG00000018483	MBD4	72	58.140	Esox_lucius
ENSPFOG00000014471	mbd4	98	47.433	ENSGMOG00000013830	mbd4	100	47.010	Gadus_morhua
ENSPFOG00000014471	mbd4	100	90.508	ENSGAFG00000016011	mbd4	100	90.508	Gambusia_affinis
ENSPFOG00000014471	mbd4	92	43.437	ENSGACG00000001970	-	80	47.312	Gasterosteus_aculeatus
ENSPFOG00000014471	mbd4	100	62.979	ENSKMAG00000015015	mbd4	100	64.043	Kryptolebias_marmoratus
ENSPFOG00000014471	mbd4	98	54.967	ENSLBEG00000005669	MBD4	86	53.982	Labrus_bergylta
ENSPFOG00000014471	mbd4	98	42.829	ENSLOCG00000013054	MBD4	99	43.625	Lepisosteus_oculatus
ENSPFOG00000014471	mbd4	59	44.280	ENSMAMG00000024084	-	77	43.682	Mastacembelus_armatus
ENSPFOG00000014471	mbd4	54	80.473	ENSMODG00000006399	-	50	80.473	Monodelphis_domestica
ENSPFOG00000014471	mbd4	98	60.954	ENSMALG00000021517	mbd4	87	60.000	Monopterus_albus
ENSPFOG00000014471	mbd4	98	43.564	MGP_CAROLIEiJ_G0028760	Mbd4	86	43.992	Mus_caroli
ENSPFOG00000014471	mbd4	98	44.355	ENSMUSG00000030322	Mbd4	87	44.040	Mus_musculus
ENSPFOG00000014471	mbd4	99	44.223	MGP_PahariEiJ_G0022511	-	54	58.871	Mus_pahari
ENSPFOG00000014471	mbd4	98	45.214	MGP_SPRETEiJ_G0029788	Mbd4	87	43.564	Mus_spretus
ENSPFOG00000014471	mbd4	99	42.636	ENSMLUG00000014766	MBD4	56	60.905	Myotis_lucifugus
ENSPFOG00000014471	mbd4	98	62.673	ENSONIG00000017212	mbd4	100	62.673	Oreochromis_niloticus
ENSPFOG00000014471	mbd4	72	52.941	ENSOCUG00000013006	MBD4	54	52.941	Oryctolagus_cuniculus
ENSPFOG00000014471	mbd4	98	54.783	ENSORLG00000011049	mbd4	97	54.783	Oryzias_latipes
ENSPFOG00000014471	mbd4	98	54.545	ENSORLG00020020013	mbd4	97	54.545	Oryzias_latipes_hni
ENSPFOG00000014471	mbd4	98	54.447	ENSORLG00015015342	mbd4	97	54.447	Oryzias_latipes_hsok
ENSPFOG00000014471	mbd4	98	56.739	ENSOMEG00000008819	mbd4	91	56.674	Oryzias_melastigma
ENSPFOG00000014471	mbd4	54	77.778	ENSPANG00000015047	MBD4	50	58.911	Papio_anubis
ENSPFOG00000014471	mbd4	98	45.923	ENSPKIG00000012306	MBD4	75	46.753	Paramormyrops_kingsleyae
ENSPFOG00000014471	mbd4	90	50.820	ENSPCIG00000002276	-	75	50.820	Phascolarctos_cinereus
ENSPFOG00000014471	mbd4	99	41.992	ENSPVAG00000005238	MBD4	87	41.602	Pteropus_vampyrus
ENSPFOG00000014471	mbd4	98	47.556	ENSPNAG00000000509	mbd4	94	47.778	Pygocentrus_nattereri
ENSPFOG00000014471	mbd4	54	78.363	ENSRBIG00000027722	MBD4	83	40.774	Rhinopithecus_bieti
ENSPFOG00000014471	mbd4	98	40.406	ENSRROG00000029136	MBD4	83	41.002	Rhinopithecus_roxellana
ENSPFOG00000014471	mbd4	98	44.685	ENSSFOG00015016292	mbd4	95	44.685	Scleropages_formosus
ENSPFOG00000014471	mbd4	98	59.471	ENSSMAG00000013958	-	67	59.031	Scophthalmus_maximus
ENSPFOG00000014471	mbd4	98	63.239	ENSSDUG00000001365	mbd4	93	63.239	Seriola_dumerili
ENSPFOG00000014471	mbd4	85	57.606	ENSSLDG00000010295	MBD4	80	56.716	Seriola_lalandi_dorsalis
ENSPFOG00000014471	mbd4	93	40.659	ENSSSCG00000033303	MBD4	83	40.659	Sus_scrofa
ENSPFOG00000014471	mbd4	98	58.705	ENSTRUG00000010124	mbd4	95	58.705	Takifugu_rubripes
ENSPFOG00000014471	mbd4	98	55.965	ENSTNIG00000017927	mbd4	100	55.531	Tetraodon_nigroviridis
ENSPFOG00000014471	mbd4	98	43.636	ENSXETG00000026622	mbd4	89	43.636	Xenopus_tropicalis
ENSPFOG00000014471	mbd4	100	92.053	ENSXMAG00000021129	mbd4	100	92.053	Xiphophorus_maculatus