EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000014499 (Gene tree)
Gene ID: 103141575
Gene Symbol: si:dkey-34d22.5
Alias: -
Full Name: RAB42%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 4162 bases
Position: chrKI519696.1:1152168-1156329
Accession: 103141575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000014511	MMR_HSR1	PF01926.23	4.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000014533	-	2135	XM_007557270	ENSPFOP00000014511	222 (aa)	XP_007557332	A0A087Y908

Gene Model

Click here to download ENSPFOG00000014499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000014499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000014499	si:dkey-34d22.5	74	44.848	ENSPFOG00000017775	rab15	76	44.848
ENSPFOG00000014499	si:dkey-34d22.5	74	44.242	ENSPFOG00000006314	-	66	44.242
ENSPFOG00000014499	si:dkey-34d22.5	77	41.860	ENSPFOG00000004746	si:dkey-16l2.16	80	41.860
ENSPFOG00000014499	si:dkey-34d22.5	71	34.177	ENSPFOG00000001515	rhebl1	84	34.177
ENSPFOG00000014499	si:dkey-34d22.5	85	38.298	ENSPFOG00000014630	rab4a	86	38.298
ENSPFOG00000014499	si:dkey-34d22.5	75	36.145	ENSPFOG00000011263	rab5aa	75	36.145
ENSPFOG00000014499	si:dkey-34d22.5	97	32.883	ENSPFOG00000006159	rab11ba	95	32.883
ENSPFOG00000014499	si:dkey-34d22.5	75	34.118	ENSPFOG00000017960	rabl2	73	34.118
ENSPFOG00000014499	si:dkey-34d22.5	78	32.759	ENSPFOG00000002595	hrasb	88	32.749
ENSPFOG00000014499	si:dkey-34d22.5	78	30.899	ENSPFOG00000013066	RAB29	82	30.899
ENSPFOG00000014499	si:dkey-34d22.5	72	40.373	ENSPFOG00000001579	rab12	64	40.373
ENSPFOG00000014499	si:dkey-34d22.5	74	44.242	ENSPFOG00000019144	-	66	44.242
ENSPFOG00000014499	si:dkey-34d22.5	98	50.917	ENSPFOG00000004492	RAB39B	98	50.917
ENSPFOG00000014499	si:dkey-34d22.5	76	42.012	ENSPFOG00000014418	-	83	42.012
ENSPFOG00000014499	si:dkey-34d22.5	74	43.195	ENSPFOG00000022477	-	75	43.195
ENSPFOG00000014499	si:dkey-34d22.5	97	39.352	ENSPFOG00000006655	rab35b	98	39.352
ENSPFOG00000014499	si:dkey-34d22.5	75	36.747	ENSPFOG00000023458	rab5c	90	32.710
ENSPFOG00000014499	si:dkey-34d22.5	97	34.404	ENSPFOG00000009284	rab11a	95	34.404
ENSPFOG00000014499	si:dkey-34d22.5	95	33.649	ENSPFOG00000011444	rab34b	80	33.649
ENSPFOG00000014499	si:dkey-34d22.5	70	30.769	ENSPFOG00000000601	si:ch73-116o1.2	79	30.952
ENSPFOG00000014499	si:dkey-34d22.5	77	35.465	ENSPFOG00000010632	rab25a	78	35.465
ENSPFOG00000014499	si:dkey-34d22.5	97	33.032	ENSPFOG00000006224	-	95	33.032
ENSPFOG00000014499	si:dkey-34d22.5	71	37.580	ENSPFOG00000011493	rab23	70	36.686
ENSPFOG00000014499	si:dkey-34d22.5	76	41.420	ENSPFOG00000000498	-	80	41.420
ENSPFOG00000014499	si:dkey-34d22.5	75	31.548	ENSPFOG00000008678	si:cabz01085950.1	82	31.548
ENSPFOG00000014499	si:dkey-34d22.5	75	30.994	ENSPFOG00000020516	rasd4	78	30.994
ENSPFOG00000014499	si:dkey-34d22.5	71	33.333	ENSPFOG00000006335	dnajc27	58	33.333
ENSPFOG00000014499	si:dkey-34d22.5	77	38.824	ENSPFOG00000011424	RAB41	77	38.824
ENSPFOG00000014499	si:dkey-34d22.5	97	41.935	ENSPFOG00000001167	-	97	41.935
ENSPFOG00000014499	si:dkey-34d22.5	72	36.478	ENSPFOG00000013027	rab22a	95	36.478
ENSPFOG00000014499	si:dkey-34d22.5	76	42.262	ENSPFOG00000013182	RAB15	78	42.262
ENSPFOG00000014499	si:dkey-34d22.5	77	38.824	ENSPFOG00000019509	rab6a	78	38.824
ENSPFOG00000014499	si:dkey-34d22.5	75	36.145	ENSPFOG00000005901	-	73	36.145
ENSPFOG00000014499	si:dkey-34d22.5	75	44.910	ENSPFOG00000013491	rab18b	80	44.910
ENSPFOG00000014499	si:dkey-34d22.5	97	32.870	ENSPFOG00000011310	rab25b	96	32.870
ENSPFOG00000014499	si:dkey-34d22.5	77	38.012	ENSPFOG00000011316	rab11al	77	38.012
ENSPFOG00000014499	si:dkey-34d22.5	78	33.908	ENSPFOG00000008547	rab34a	56	33.908
ENSPFOG00000014499	si:dkey-34d22.5	75	35.542	ENSPFOG00000012977	rab22a	84	35.542
ENSPFOG00000014499	si:dkey-34d22.5	86	60.000	ENSPFOG00000004838	rab42a	72	60.104
ENSPFOG00000014499	si:dkey-34d22.5	87	32.673	ENSPFOG00000008890	rras	70	34.591
ENSPFOG00000014499	si:dkey-34d22.5	75	36.747	ENSPFOG00000012082	rab5c	90	32.710
ENSPFOG00000014499	si:dkey-34d22.5	71	36.646	ENSPFOG00000015409	si:dkey-13a21.4	77	36.646
ENSPFOG00000014499	si:dkey-34d22.5	98	50.917	ENSPFOG00000004684	-	98	50.917
ENSPFOG00000014499	si:dkey-34d22.5	87	30.918	ENSPFOG00000003006	rasl11a	77	30.918
ENSPFOG00000014499	si:dkey-34d22.5	71	33.121	ENSPFOG00000004921	rheb	84	33.121
ENSPFOG00000014499	si:dkey-34d22.5	78	41.040	ENSPFOG00000013810	zgc:171927	78	41.040
ENSPFOG00000014499	si:dkey-34d22.5	92	33.014	ENSPFOG00000003465	RAB7A	95	33.014
ENSPFOG00000014499	si:dkey-34d22.5	76	41.420	ENSPFOG00000001829	rab1ab	81	41.420
ENSPFOG00000014499	si:dkey-34d22.5	97	40.826	ENSPFOG00000019821	RAB14	96	40.826
ENSPFOG00000014499	si:dkey-34d22.5	79	39.205	ENSPFOG00000012594	rab1ba	80	39.205
ENSPFOG00000014499	si:dkey-34d22.5	80	37.766	ENSPFOG00000020060	rab9b	91	37.766
ENSPFOG00000014499	si:dkey-34d22.5	85	37.113	ENSPFOG00000004037	rab33a	68	37.113
ENSPFOG00000014499	si:dkey-34d22.5	69	40.385	ENSPFOG00000000349	rab33ba	61	41.447
ENSPFOG00000014499	si:dkey-34d22.5	77	39.227	ENSPFOG00000022360	-	63	42.763
ENSPFOG00000014499	si:dkey-34d22.5	77	36.257	ENSPFOG00000024114	-	77	36.257
ENSPFOG00000014499	si:dkey-34d22.5	75	43.114	ENSPFOG00000005479	rab30	80	43.114
ENSPFOG00000014499	si:dkey-34d22.5	97	36.574	ENSPFOG00000004786	rab2a	99	36.574
ENSPFOG00000014499	si:dkey-34d22.5	51	39.474	ENSPFOG00000024387	rras2	65	39.474
ENSPFOG00000014499	si:dkey-34d22.5	91	33.333	ENSPFOG00000003934	-	94	33.333
ENSPFOG00000014499	si:dkey-34d22.5	75	43.713	ENSPFOG00000007571	rab18a	80	43.713
ENSPFOG00000014499	si:dkey-34d22.5	74	41.420	ENSPFOG00000024704	rab9a	82	41.420
ENSPFOG00000014499	si:dkey-34d22.5	67	40.667	ENSPFOG00000009101	-	63	40.667
ENSPFOG00000014499	si:dkey-34d22.5	90	36.453	ENSPFOG00000003742	rab6ba	94	36.453
ENSPFOG00000014499	si:dkey-34d22.5	70	32.903	ENSPFOG00000015499	kras	86	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000014499	si:dkey-34d22.5	100	87.387	ENSACIG00000016958	si:dkey-34d22.5	100	87.387	Amphilophus_citrinellus
ENSPFOG00000014499	si:dkey-34d22.5	100	85.586	ENSATEG00000010784	si:dkey-34d22.5	86	85.586	Anabas_testudineus
ENSPFOG00000014499	si:dkey-34d22.5	89	63.452	ENSCPBG00000011236	-	90	63.452	Chrysemys_picta_bellii
ENSPFOG00000014499	si:dkey-34d22.5	100	74.324	ENSCSEG00000019183	si:dkey-34d22.5	100	74.324	Cynoglossus_semilaevis
ENSPFOG00000014499	si:dkey-34d22.5	100	91.892	ENSCVAG00000017064	si:dkey-34d22.5	100	91.892	Cyprinodon_variegatus
ENSPFOG00000014499	si:dkey-34d22.5	83	49.189	ENSDARG00000100379	si:dkey-34d22.2	99	49.189	Danio_rerio
ENSPFOG00000014499	si:dkey-34d22.5	97	57.407	ENSFALG00000001373	-	97	57.407	Ficedula_albicollis
ENSPFOG00000014499	si:dkey-34d22.5	100	92.825	ENSFHEG00000012041	si:dkey-34d22.5	100	92.825	Fundulus_heteroclitus
ENSPFOG00000014499	si:dkey-34d22.5	86	61.458	ENSGALG00000000994	-	90	61.458	Gallus_gallus
ENSPFOG00000014499	si:dkey-34d22.5	100	97.748	ENSGAFG00000008183	si:dkey-34d22.5	100	97.748	Gambusia_affinis
ENSPFOG00000014499	si:dkey-34d22.5	94	57.212	ENSGAGG00000004918	-	100	57.212	Gopherus_agassizii
ENSPFOG00000014499	si:dkey-34d22.5	99	73.756	ENSHCOG00000015692	si:dkey-34d22.5	99	73.756	Hippocampus_comes
ENSPFOG00000014499	si:dkey-34d22.5	100	87.387	ENSKMAG00000012778	si:dkey-34d22.5	100	87.387	Kryptolebias_marmoratus
ENSPFOG00000014499	si:dkey-34d22.5	99	81.900	ENSLBEG00000002926	si:dkey-34d22.5	100	81.900	Labrus_bergylta
ENSPFOG00000014499	si:dkey-34d22.5	98	58.716	ENSLACG00000012674	si:dkey-34d22.5	99	58.716	Latimeria_chalumnae
ENSPFOG00000014499	si:dkey-34d22.5	98	67.281	ENSLOCG00000003467	si:dkey-34d22.5	98	70.507	Lepisosteus_oculatus
ENSPFOG00000014499	si:dkey-34d22.5	100	80.180	ENSMMOG00000006846	si:dkey-34d22.5	100	80.180	Mola_mola
ENSPFOG00000014499	si:dkey-34d22.5	100	81.982	ENSMALG00000013152	si:dkey-34d22.5	100	81.982	Monopterus_albus
ENSPFOG00000014499	si:dkey-34d22.5	99	85.973	ENSORLG00000014099	si:dkey-34d22.5	99	85.973	Oryzias_latipes
ENSPFOG00000014499	si:dkey-34d22.5	99	85.520	ENSORLG00020020277	si:dkey-34d22.5	99	85.520	Oryzias_latipes_hni
ENSPFOG00000014499	si:dkey-34d22.5	99	85.520	ENSORLG00015000142	si:dkey-34d22.5	99	85.520	Oryzias_latipes_hsok
ENSPFOG00000014499	si:dkey-34d22.5	91	91.089	ENSOMEG00000017958	si:dkey-34d22.5	99	87.783	Oryzias_melastigma
ENSPFOG00000014499	si:dkey-34d22.5	97	73.148	ENSPKIG00000021209	si:dkey-34d22.5	99	73.148	Paramormyrops_kingsleyae
ENSPFOG00000014499	si:dkey-34d22.5	91	61.692	ENSPSIG00000006606	-	99	61.692	Pelodiscus_sinensis
ENSPFOG00000014499	si:dkey-34d22.5	99	82.805	ENSPMGG00000001298	-	99	82.805	Periophthalmus_magnuspinnatus
ENSPFOG00000014499	si:dkey-34d22.5	89	59.898	ENSPCIG00000022399	-	88	59.898	Phascolarctos_cinereus
ENSPFOG00000014499	si:dkey-34d22.5	100	100.000	ENSPLAG00000007773	si:dkey-34d22.5	100	100.000	Poecilia_latipinna
ENSPFOG00000014499	si:dkey-34d22.5	100	100.000	ENSPMEG00000012932	si:dkey-34d22.5	100	100.000	Poecilia_mexicana
ENSPFOG00000014499	si:dkey-34d22.5	89	59.391	ENSSHAG00000008520	-	88	59.391	Sarcophilus_harrisii
ENSPFOG00000014499	si:dkey-34d22.5	97	68.837	ENSSFOG00015012088	rab42	96	68.837	Scleropages_formosus
ENSPFOG00000014499	si:dkey-34d22.5	100	87.838	ENSSLDG00000002646	si:dkey-34d22.5	100	87.838	Seriola_lalandi_dorsalis
ENSPFOG00000014499	si:dkey-34d22.5	99	87.783	ENSSPAG00000012955	si:dkey-34d22.5	99	87.783	Stegastes_partitus
ENSPFOG00000014499	si:dkey-34d22.5	93	48.544	ENSXETG00000020622	rab39a	98	48.544	Xenopus_tropicalis
ENSPFOG00000014499	si:dkey-34d22.5	100	96.847	ENSXCOG00000008410	si:dkey-34d22.5	100	96.847	Xiphophorus_couchianus
ENSPFOG00000014499	si:dkey-34d22.5	100	96.847	ENSXMAG00000029317	si:dkey-34d22.5	100	96.847	Xiphophorus_maculatus