EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPFOG00000014600 (Gene tree)
Gene ID
-
Gene Symbol
srrm4
Alias
-
Full Name
serine/arginine repetitive matrix 4
Gene Type
protein_coding
Species
Poecilia_formosa
Status
putative
Strand
Minus strand
Length
16772 bases
Position
chrKI519630.1:3035943-3052714
Accession
ZDB-GENE-050208-34
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPFOP00000026730SRRM_CPF15230.61.2e-2611
ENSPFOP00000014650SRRM_CPF15230.61.3e-2611
ENSPFOP00000021748SRRM_CPF15230.61.7e-2611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPFOT00000027548-5459-ENSPFOP00000026730359 (aa)-A0A096M5N9
ENSPFOT00000026355-1305-ENSPFOP00000021748435 (aa)-A0A096LRF7
ENSPFOT00000014672-5499-ENSPFOP00000014650377 (aa)-A0A087Y9E7
Gene Model
Click here to download ENSPFOG00000014600's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000014600's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPFOG00000014600srrm49968.156ENSAPOG00000010969srrm47065.385Acanthochromis_polyacanthus
ENSPFOG00000014600srrm49968.436ENSAOCG00000019891srrm47264.706Amphiprion_ocellaris
ENSPFOG00000014600srrm49966.851ENSAPEG00000011132srrm47063.616Amphiprion_percula
ENSPFOG00000014600srrm47448.944ENSAMXG00000038719srrm45448.657Astyanax_mexicanus
ENSPFOG00000014600srrm48546.649ENSELUG00000004986srrm48449.640Esox_lucius
ENSPFOG00000014600srrm48354.785ENSGMOG00000006714srrm48250.922Gadus_morhua
ENSPFOG00000014600srrm410074.177ENSGAFG00000006706srrm47576.393Gambusia_affinis
ENSPFOG00000014600srrm49963.966ENSHBUG00000010505srrm47362.445Haplochromis_burtoni
ENSPFOG00000014600srrm49364.269ENSKMAG00000001873srrm47264.222Kryptolebias_marmoratus
ENSPFOG00000014600srrm48560.052ENSLBEG00000008471srrm47261.842Labrus_bergylta
ENSPFOG00000014600srrm48761.125ENSMALG00000001422srrm46763.446Monopterus_albus
ENSPFOG00000014600srrm49966.295ENSONIG00000010552srrm48964.000Oreochromis_niloticus
ENSPFOG00000014600srrm48758.701ENSOMEG00000012376srrm46158.718Oryzias_melastigma
ENSPFOG00000014600srrm49984.916ENSPLAG00000002006srrm48183.777Poecilia_latipinna
ENSPFOG00000014600srrm410078.228ENSPMEG00000017802srrm48280.902Poecilia_mexicana
ENSPFOG00000014600srrm49970.718ENSSDUG00000017519srrm49964.525Seriola_dumerili
ENSPFOG00000014600srrm49967.857ENSSLDG00000015130srrm47767.109Seriola_lalandi_dorsalis
ENSPFOG00000014600srrm49989.665ENSXMAG00000002658srrm47182.262Xiphophorus_maculatus

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