EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000015036 (Gene tree)
Gene ID: 103141411
Gene Symbol: r3hdm1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 41026 bases
Position: chrKI519693.1:45383-86408
Accession: ZDB-GENE-030131-7119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000015212	R3H	PF01424.22	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000015234	-	3531	-	ENSPFOP00000015212	1027 (aa)	-	A0A087YB09

Gene Model

Click here to download ENSPFOG00000015036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000015036's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000015036	r3hdm1	62	57.925	ENSPFOG00000006077	r3hdm2	77	57.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000015036	r3hdm1	94	55.474	ENSG00000048991	R3HDM1	91	66.667	Homo_sapiens
ENSPFOG00000015036	r3hdm1	100	82.493	ENSAPOG00000020850	r3hdm1	96	82.493	Acanthochromis_polyacanthus
ENSPFOG00000015036	r3hdm1	99	45.953	ENSAMEG00000014886	R3HDM1	89	46.481	Ailuropoda_melanoleuca
ENSPFOG00000015036	r3hdm1	100	82.588	ENSAOCG00000005192	r3hdm1	100	82.778	Amphiprion_ocellaris
ENSPFOG00000015036	r3hdm1	100	78.748	ENSAPEG00000016108	r3hdm1	100	78.843	Amphiprion_percula
ENSPFOG00000015036	r3hdm1	100	75.024	ENSATEG00000000232	r3hdm1	100	75.024	Anabas_testudineus
ENSPFOG00000015036	r3hdm1	99	46.097	ENSAPLG00000015231	R3HDM1	89	46.075	Anas_platyrhynchos
ENSPFOG00000015036	r3hdm1	99	48.833	ENSACAG00000001676	R3HDM1	89	49.395	Anolis_carolinensis
ENSPFOG00000015036	r3hdm1	91	55.718	ENSANAG00000035334	R3HDM1	87	55.718	Aotus_nancymaae
ENSPFOG00000015036	r3hdm1	100	73.048	ENSACLG00000027282	r3hdm1	100	73.048	Astatotilapia_calliptera
ENSPFOG00000015036	r3hdm1	91	62.077	ENSAMXG00000012861	R3HDM1	89	61.353	Astyanax_mexicanus
ENSPFOG00000015036	r3hdm1	59	49.123	ENSAMXG00000020587	arpp21	88	43.407	Astyanax_mexicanus
ENSPFOG00000015036	r3hdm1	87	67.480	ENSAMXG00000003536	r3hdm1	81	68.802	Astyanax_mexicanus
ENSPFOG00000015036	r3hdm1	99	48.030	ENSBTAG00000013302	R3HDM1	89	49.021	Bos_taurus
ENSPFOG00000015036	r3hdm1	85	67.857	ENSCJAG00000011718	R3HDM1	87	55.718	Callithrix_jacchus
ENSPFOG00000015036	r3hdm1	99	46.147	ENSCAFG00000005075	R3HDM1	89	46.587	Canis_familiaris
ENSPFOG00000015036	r3hdm1	99	48.004	ENSCAFG00020016119	R3HDM1	99	56.071	Canis_lupus_dingo
ENSPFOG00000015036	r3hdm1	99	48.221	ENSCHIG00000020851	R3HDM1	89	48.926	Capra_hircus
ENSPFOG00000015036	r3hdm1	99	47.081	ENSCPOG00000012784	R3HDM1	100	59.866	Cavia_porcellus
ENSPFOG00000015036	r3hdm1	94	55.147	ENSCCAG00000027199	R3HDM1	87	55.147	Cebus_capucinus
ENSPFOG00000015036	r3hdm1	94	55.474	ENSCATG00000023642	R3HDM1	87	55.474	Cercocebus_atys
ENSPFOG00000015036	r3hdm1	99	47.641	ENSCLAG00000007962	R3HDM1	100	62.542	Chinchilla_lanigera
ENSPFOG00000015036	r3hdm1	99	47.486	ENSCSAG00000016356	R3HDM1	89	48.244	Chlorocebus_sabaeus
ENSPFOG00000015036	r3hdm1	77	66.406	ENSCHOG00000013638	R3HDM1	68	66.406	Choloepus_hoffmanni
ENSPFOG00000015036	r3hdm1	91	48.438	ENSCPBG00000009645	R3HDM1	86	70.758	Chrysemys_picta_bellii
ENSPFOG00000015036	r3hdm1	93	57.467	ENSCANG00000034748	R3HDM1	87	55.474	Colobus_angolensis_palliatus
ENSPFOG00000015036	r3hdm1	99	47.179	ENSCGRG00001012357	R3hdm1	86	47.549	Cricetulus_griseus_chok1gshd
ENSPFOG00000015036	r3hdm1	99	47.179	ENSCGRG00000012080	R3hdm1	100	63.245	Cricetulus_griseus_crigri
ENSPFOG00000015036	r3hdm1	100	66.852	ENSCSEG00000008944	r3hdm1	100	68.085	Cynoglossus_semilaevis
ENSPFOG00000015036	r3hdm1	100	85.645	ENSCVAG00000007582	r3hdm1	100	85.645	Cyprinodon_variegatus
ENSPFOG00000015036	r3hdm1	99	44.372	ENSDNOG00000000771	R3HDM1	89	44.856	Dasypus_novemcinctus
ENSPFOG00000015036	r3hdm1	91	55.819	ENSETEG00000013606	R3HDM1	89	42.949	Echinops_telfairi
ENSPFOG00000015036	r3hdm1	91	58.907	ENSEASG00005007392	R3HDM1	88	59.145	Equus_asinus_asinus
ENSPFOG00000015036	r3hdm1	91	58.907	ENSECAG00000019114	R3HDM1	88	59.145	Equus_caballus
ENSPFOG00000015036	r3hdm1	59	50.980	ENSEEUG00000012589	R3HDM1	56	50.624	Erinaceus_europaeus
ENSPFOG00000015036	r3hdm1	95	52.348	ENSELUG00000004909	R3HDM1	85	53.027	Esox_lucius
ENSPFOG00000015036	r3hdm1	87	48.140	ENSELUG00000014413	r3hdm1	83	50.212	Esox_lucius
ENSPFOG00000015036	r3hdm1	94	58.195	ENSFCAG00000027113	R3HDM1	88	59.145	Felis_catus
ENSPFOG00000015036	r3hdm1	84	49.109	ENSFALG00000013731	R3HDM1	90	44.602	Ficedula_albicollis
ENSPFOG00000015036	r3hdm1	99	47.922	ENSFDAG00000016478	R3HDM1	100	62.542	Fukomys_damarensis
ENSPFOG00000015036	r3hdm1	100	87.044	ENSFHEG00000018713	r3hdm1	100	87.428	Fundulus_heteroclitus
ENSPFOG00000015036	r3hdm1	65	62.658	ENSGMOG00000006042	-	79	57.726	Gadus_morhua
ENSPFOG00000015036	r3hdm1	78	67.974	ENSGALG00000012246	R3HDM1	84	64.686	Gallus_gallus
ENSPFOG00000015036	r3hdm1	100	86.170	ENSGAFG00000006203	r3hdm1	100	86.654	Gambusia_affinis
ENSPFOG00000015036	r3hdm1	94	76.761	ENSGACG00000014925	r3hdm1	95	76.993	Gasterosteus_aculeatus
ENSPFOG00000015036	r3hdm1	89	60.925	ENSGAGG00000007840	R3HDM1	82	60.925	Gopherus_agassizii
ENSPFOG00000015036	r3hdm1	94	55.474	ENSGGOG00000008156	R3HDM1	99	46.353	Gorilla_gorilla
ENSPFOG00000015036	r3hdm1	52	81.101	ENSHBUG00000015737	R3HDM1	96	81.101	Haplochromis_burtoni
ENSPFOG00000015036	r3hdm1	99	48.699	ENSHGLG00000015718	R3HDM1	100	63.545	Heterocephalus_glaber_female
ENSPFOG00000015036	r3hdm1	99	48.606	ENSHGLG00100003184	-	100	63.880	Heterocephalus_glaber_male
ENSPFOG00000015036	r3hdm1	73	50.882	ENSHGLG00100015374	-	85	39.657	Heterocephalus_glaber_male
ENSPFOG00000015036	r3hdm1	100	63.454	ENSHCOG00000013366	r3hdm1	100	63.454	Hippocampus_comes
ENSPFOG00000015036	r3hdm1	92	59.574	ENSIPUG00000001676	R3HDM1	100	59.709	Ictalurus_punctatus
ENSPFOG00000015036	r3hdm1	91	57.500	ENSIPUG00000013629	r3hdm1	88	56.750	Ictalurus_punctatus
ENSPFOG00000015036	r3hdm1	99	47.814	ENSSTOG00000007572	R3HDM1	100	62.583	Ictidomys_tridecemlineatus
ENSPFOG00000015036	r3hdm1	95	51.133	ENSLACG00000005334	R3HDM1	87	50.640	Latimeria_chalumnae
ENSPFOG00000015036	r3hdm1	99	50.794	ENSLOCG00000001641	r3hdm1	90	51.351	Lepisosteus_oculatus
ENSPFOG00000015036	r3hdm1	85	64.706	ENSLAFG00000009065	R3HDM1	85	64.957	Loxodonta_africana
ENSPFOG00000015036	r3hdm1	94	58.670	ENSMFAG00000030331	R3HDM1	88	59.620	Macaca_fascicularis
ENSPFOG00000015036	r3hdm1	94	55.474	ENSMMUG00000009844	R3HDM1	87	55.474	Macaca_mulatta
ENSPFOG00000015036	r3hdm1	94	58.670	ENSMNEG00000027793	R3HDM1	88	59.620	Macaca_nemestrina
ENSPFOG00000015036	r3hdm1	94	55.474	ENSMLEG00000043189	R3HDM1	87	55.474	Mandrillus_leucophaeus
ENSPFOG00000015036	r3hdm1	100	79.314	ENSMAMG00000004532	r3hdm1	100	79.314	Mastacembelus_armatus
ENSPFOG00000015036	r3hdm1	100	79.373	ENSMZEG00005003157	r3hdm1	100	79.658	Maylandia_zebra
ENSPFOG00000015036	r3hdm1	96	46.790	ENSMGAG00000012461	R3HDM1	88	46.075	Meleagris_gallopavo
ENSPFOG00000015036	r3hdm1	99	46.961	ENSMAUG00000010315	R3hdm1	100	62.914	Mesocricetus_auratus
ENSPFOG00000015036	r3hdm1	94	55.231	ENSMICG00000005900	-	80	67.532	Microcebus_murinus
ENSPFOG00000015036	r3hdm1	94	54.988	ENSMICG00000042655	-	85	67.208	Microcebus_murinus
ENSPFOG00000015036	r3hdm1	99	46.799	ENSMODG00000000923	R3HDM1	96	46.661	Monodelphis_domestica
ENSPFOG00000015036	r3hdm1	100	77.173	ENSMALG00000009000	r3hdm1	90	77.077	Monopterus_albus
ENSPFOG00000015036	r3hdm1	99	46.994	MGP_CAROLIEiJ_G0014543	R3hdm1	100	63.576	Mus_caroli
ENSPFOG00000015036	r3hdm1	99	47.179	ENSMUSG00000056211	R3hdm1	100	63.576	Mus_musculus
ENSPFOG00000015036	r3hdm1	99	46.623	MGP_PahariEiJ_G0027779	R3hdm1	100	63.576	Mus_pahari
ENSPFOG00000015036	r3hdm1	99	47.271	MGP_SPRETEiJ_G0015350	R3hdm1	100	63.576	Mus_spretus
ENSPFOG00000015036	r3hdm1	99	46.692	ENSMPUG00000002412	R3HDM1	89	46.568	Mustela_putorius_furo
ENSPFOG00000015036	r3hdm1	99	46.083	ENSMLUG00000013824	R3HDM1	89	46.531	Myotis_lucifugus
ENSPFOG00000015036	r3hdm1	85	67.532	ENSNLEG00000008622	R3HDM1	81	67.532	Nomascus_leucogenys
ENSPFOG00000015036	r3hdm1	94	41.755	ENSMEUG00000011784	R3HDM1	93	41.867	Notamacropus_eugenii
ENSPFOG00000015036	r3hdm1	99	47.240	ENSODEG00000008607	R3HDM1	100	61.873	Octodon_degus
ENSPFOG00000015036	r3hdm1	95	74.241	ENSONIG00000012017	r3hdm1	89	74.241	Oreochromis_niloticus
ENSPFOG00000015036	r3hdm1	99	45.336	ENSOANG00000007987	R3HDM1	89	46.475	Ornithorhynchus_anatinus
ENSPFOG00000015036	r3hdm1	99	46.168	ENSOCUG00000017366	R3HDM1	97	46.791	Oryctolagus_cuniculus
ENSPFOG00000015036	r3hdm1	100	71.839	ENSORLG00000004297	r3hdm1	100	72.605	Oryzias_latipes
ENSPFOG00000015036	r3hdm1	100	72.344	ENSORLG00015017355	r3hdm1	100	73.206	Oryzias_latipes_hsok
ENSPFOG00000015036	r3hdm1	51	76.384	ENSOMEG00000003882	-	97	77.316	Oryzias_melastigma
ENSPFOG00000015036	r3hdm1	99	46.542	ENSOGAG00000003136	R3HDM1	89	46.561	Otolemur_garnettii
ENSPFOG00000015036	r3hdm1	99	46.579	ENSOARG00000010788	R3HDM1	89	46.816	Ovis_aries
ENSPFOG00000015036	r3hdm1	94	55.474	ENSPPAG00000027858	R3HDM1	87	55.474	Pan_paniscus
ENSPFOG00000015036	r3hdm1	94	55.231	ENSPPRG00000002626	R3HDM1	87	55.231	Panthera_pardus
ENSPFOG00000015036	r3hdm1	94	55.231	ENSPTIG00000016581	R3HDM1	87	55.231	Panthera_tigris_altaica
ENSPFOG00000015036	r3hdm1	94	55.474	ENSPTRG00000012494	R3HDM1	87	55.474	Pan_troglodytes
ENSPFOG00000015036	r3hdm1	94	55.474	ENSPANG00000026448	R3HDM1	87	55.474	Papio_anubis
ENSPFOG00000015036	r3hdm1	89	70.201	ENSPKIG00000004328	r3hdm1	78	72.757	Paramormyrops_kingsleyae
ENSPFOG00000015036	r3hdm1	99	45.783	ENSPSIG00000012915	R3HDM1	88	45.580	Pelodiscus_sinensis
ENSPFOG00000015036	r3hdm1	99	47.086	ENSPEMG00000015187	R3hdm1	100	63.245	Peromyscus_maniculatus_bairdii
ENSPFOG00000015036	r3hdm1	94	59.102	ENSPCIG00000002491	R3HDM1	88	59.338	Phascolarctos_cinereus
ENSPFOG00000015036	r3hdm1	100	91.934	ENSPLAG00000018042	r3hdm1	100	91.934	Poecilia_latipinna
ENSPFOG00000015036	r3hdm1	100	91.440	ENSPMEG00000023947	r3hdm1	100	91.440	Poecilia_mexicana
ENSPFOG00000015036	r3hdm1	100	95.164	ENSPREG00000007902	r3hdm1	100	95.164	Poecilia_reticulata
ENSPFOG00000015036	r3hdm1	99	44.837	ENSPPYG00000012815	R3HDM1	89	45.337	Pongo_abelii
ENSPFOG00000015036	r3hdm1	93	58.112	ENSPCAG00000006208	R3HDM1	82	59.118	Procavia_capensis
ENSPFOG00000015036	r3hdm1	82	69.565	ENSPCOG00000012698	R3HDM1	79	69.565	Propithecus_coquereli
ENSPFOG00000015036	r3hdm1	99	40.799	ENSPVAG00000006098	R3HDM1	89	41.220	Pteropus_vampyrus
ENSPFOG00000015036	r3hdm1	84	70.402	ENSPNAG00000013952	r3hdm1	89	61.737	Pygocentrus_nattereri
ENSPFOG00000015036	r3hdm1	73	70.530	ENSPNAG00000005436	R3HDM1	87	69.536	Pygocentrus_nattereri
ENSPFOG00000015036	r3hdm1	70	37.043	ENSPNAG00000004162	arpp21	89	43.137	Pygocentrus_nattereri
ENSPFOG00000015036	r3hdm1	99	47.359	ENSRNOG00000004099	R3hdm1	89	47.915	Rattus_norvegicus
ENSPFOG00000015036	r3hdm1	93	55.431	ENSRBIG00000033317	R3HDM1	86	69.675	Rhinopithecus_bieti
ENSPFOG00000015036	r3hdm1	93	57.116	ENSRROG00000034534	R3HDM1	87	55.474	Rhinopithecus_roxellana
ENSPFOG00000015036	r3hdm1	85	67.857	ENSSBOG00000020389	R3HDM1	81	67.857	Saimiri_boliviensis_boliviensis
ENSPFOG00000015036	r3hdm1	99	45.938	ENSSHAG00000016999	R3HDM1	89	46.211	Sarcophilus_harrisii
ENSPFOG00000015036	r3hdm1	91	62.562	ENSSFOG00015014134	r3hdm1	88	61.823	Scleropages_formosus
ENSPFOG00000015036	r3hdm1	100	48.411	ENSSFOG00015019851	-	87	57.088	Scleropages_formosus
ENSPFOG00000015036	r3hdm1	100	71.388	ENSSMAG00000001669	r3hdm1	90	71.482	Scophthalmus_maximus
ENSPFOG00000015036	r3hdm1	100	75.260	ENSSDUG00000010749	r3hdm1	100	75.495	Seriola_dumerili
ENSPFOG00000015036	r3hdm1	100	76.594	ENSSLDG00000004499	r3hdm1	90	76.828	Seriola_lalandi_dorsalis
ENSPFOG00000015036	r3hdm1	55	51.613	ENSSARG00000000352	-	52	52.903	Sorex_araneus
ENSPFOG00000015036	r3hdm1	99	45.794	ENSSPUG00000004167	R3HDM1	88	46.392	Sphenodon_punctatus
ENSPFOG00000015036	r3hdm1	100	77.757	ENSSPAG00000004648	r3hdm1	100	77.851	Stegastes_partitus
ENSPFOG00000015036	r3hdm1	99	48.553	ENSSSCG00000015692	R3HDM1	87	52.696	Sus_scrofa
ENSPFOG00000015036	r3hdm1	96	45.797	ENSTGUG00000011750	R3HDM1	89	45.463	Taeniopygia_guttata
ENSPFOG00000015036	r3hdm1	100	69.043	ENSTRUG00000011654	r3hdm1	99	69.763	Takifugu_rubripes
ENSPFOG00000015036	r3hdm1	98	65.828	ENSTNIG00000010362	r3hdm1	99	66.021	Tetraodon_nigroviridis
ENSPFOG00000015036	r3hdm1	84	61.667	ENSTTRG00000003935	R3HDM1	79	46.403	Tursiops_truncatus
ENSPFOG00000015036	r3hdm1	74	55.961	ENSUAMG00000024806	R3HDM1	99	56.172	Ursus_americanus
ENSPFOG00000015036	r3hdm1	94	55.961	ENSUMAG00000005552	R3HDM1	87	55.231	Ursus_maritimus
ENSPFOG00000015036	r3hdm1	85	47.222	ENSVPAG00000007333	R3HDM1	74	47.333	Vicugna_pacos
ENSPFOG00000015036	r3hdm1	94	55.231	ENSVVUG00000006457	R3HDM1	88	55.231	Vulpes_vulpes
ENSPFOG00000015036	r3hdm1	99	42.052	ENSXETG00000019330	r3hdm1	99	42.764	Xenopus_tropicalis
ENSPFOG00000015036	r3hdm1	76	82.592	ENSXCOG00000017448	r3hdm1	93	83.736	Xiphophorus_couchianus
ENSPFOG00000015036	r3hdm1	100	93.611	ENSXMAG00000007885	r3hdm1	100	94.482	Xiphophorus_maculatus