EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000015110 (Gene tree)
Gene ID: 103146440
Gene Symbol: snrnp200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 14963 bases
Position: chrKI519615.1:4728964-4743926
Accession: 103146440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000015280	ResIII	PF04851.15	1.8e-25	1	2
ENSPFOP00000015280	ResIII	PF04851.15	1.8e-25	2	2
ENSPFOP00000015280	DEAD	PF00270.29	1.1e-51	1	2
ENSPFOP00000015280	DEAD	PF00270.29	1.1e-51	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000015302	-	6698	XM_007564369	ENSPFOP00000015280	2137 (aa)	XP_007564431	A0A087YB77

Gene Model

Click here to download ENSPFOG00000015110's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000015110's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000015110	snrnp200	97	41.434	ENSPFOG00000001462	ascc3	77	48.353
ENSPFOG00000015110	snrnp200	66	30.769	ENSPFOG00000017194	hfm1	75	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000015110	snrnp200	99	90.360	ENSG00000144028	SNRNP200	100	90.360	Homo_sapiens
ENSPFOG00000015110	snrnp200	100	97.192	ENSAPOG00000010223	snrnp200	100	97.192	Acanthochromis_polyacanthus
ENSPFOG00000015110	snrnp200	99	90.407	ENSAMEG00000008996	SNRNP200	100	90.407	Ailuropoda_melanoleuca
ENSPFOG00000015110	snrnp200	97	96.733	ENSACIG00000001764	snrnp200	98	96.733	Amphilophus_citrinellus
ENSPFOG00000015110	snrnp200	100	96.958	ENSAOCG00000024593	snrnp200	100	96.958	Amphiprion_ocellaris
ENSPFOG00000015110	snrnp200	97	96.626	ENSAPEG00000012554	snrnp200	100	96.626	Amphiprion_percula
ENSPFOG00000015110	snrnp200	100	97.052	ENSATEG00000022522	snrnp200	100	97.052	Anabas_testudineus
ENSPFOG00000015110	snrnp200	99	90.716	ENSAPLG00000004313	SNRNP200	100	90.716	Anas_platyrhynchos
ENSPFOG00000015110	snrnp200	99	90.111	ENSACAG00000000434	SNRNP200	100	90.111	Anolis_carolinensis
ENSPFOG00000015110	snrnp200	99	86.928	ENSANAG00000036625	SNRNP200	100	86.741	Aotus_nancymaae
ENSPFOG00000015110	snrnp200	100	96.537	ENSACLG00000011188	snrnp200	100	96.537	Astatotilapia_calliptera
ENSPFOG00000015110	snrnp200	99	94.079	ENSAMXG00000005684	snrnp200	100	94.010	Astyanax_mexicanus
ENSPFOG00000015110	snrnp200	99	90.173	ENSBTAG00000000848	SNRNP200	100	90.173	Bos_taurus
ENSPFOG00000015110	snrnp200	99	90.360	ENSCJAG00000007514	SNRNP200	100	90.360	Callithrix_jacchus
ENSPFOG00000015110	snrnp200	99	89.646	ENSCAFG00020019979	SNRNP200	100	91.545	Canis_lupus_dingo
ENSPFOG00000015110	snrnp200	99	90.126	ENSCHIG00000020611	SNRNP200	100	90.126	Capra_hircus
ENSPFOG00000015110	snrnp200	99	90.407	ENSTSYG00000010467	SNRNP200	100	90.407	Carlito_syrichta
ENSPFOG00000015110	snrnp200	99	89.944	ENSCAPG00000017234	SNRNP200	99	89.944	Cavia_aperea
ENSPFOG00000015110	snrnp200	99	90.220	ENSCPOG00000006776	SNRNP200	100	90.220	Cavia_porcellus
ENSPFOG00000015110	snrnp200	99	90.360	ENSCCAG00000033962	SNRNP200	100	90.360	Cebus_capucinus
ENSPFOG00000015110	snrnp200	99	90.360	ENSCATG00000015790	SNRNP200	100	90.360	Cercocebus_atys
ENSPFOG00000015110	snrnp200	99	90.267	ENSCLAG00000004116	SNRNP200	100	90.267	Chinchilla_lanigera
ENSPFOG00000015110	snrnp200	99	90.360	ENSCSAG00000017369	SNRNP200	100	90.360	Chlorocebus_sabaeus
ENSPFOG00000015110	snrnp200	74	92.913	ENSCHOG00000012981	-	58	92.913	Choloepus_hoffmanni
ENSPFOG00000015110	snrnp200	99	90.607	ENSCPBG00000022571	SNRNP200	100	90.607	Chrysemys_picta_bellii
ENSPFOG00000015110	snrnp200	99	76.119	ENSCING00000005082	-	99	76.213	Ciona_intestinalis
ENSPFOG00000015110	snrnp200	94	90.149	ENSCANG00000033932	SNRNP200	100	90.149	Colobus_angolensis_palliatus
ENSPFOG00000015110	snrnp200	99	90.360	ENSCGRG00001022610	Snrnp200	100	90.360	Cricetulus_griseus_chok1gshd
ENSPFOG00000015110	snrnp200	99	89.860	ENSCGRG00000016472	Snrnp200	100	89.860	Cricetulus_griseus_crigri
ENSPFOG00000015110	snrnp200	99	95.550	ENSCSEG00000016399	snrnp200	100	95.550	Cynoglossus_semilaevis
ENSPFOG00000015110	snrnp200	100	93.215	ENSCVAG00000017631	snrnp200	100	93.215	Cyprinodon_variegatus
ENSPFOG00000015110	snrnp200	100	94.057	ENSDARG00000077536	snrnp200	100	94.057	Danio_rerio
ENSPFOG00000015110	snrnp200	99	88.956	ENSDNOG00000011227	SNRNP200	100	88.956	Dasypus_novemcinctus
ENSPFOG00000015110	snrnp200	99	87.903	ENSDORG00000005861	Snrnp200	100	87.903	Dipodomys_ordii
ENSPFOG00000015110	snrnp200	100	73.767	FBgn0263599	l(3)72Ab	100	73.767	Drosophila_melanogaster
ENSPFOG00000015110	snrnp200	95	90.009	ENSETEG00000000162	SNRNP200	74	90.009	Echinops_telfairi
ENSPFOG00000015110	snrnp200	83	81.183	ENSEBUG00000016524	snrnp200	95	81.183	Eptatretus_burgeri
ENSPFOG00000015110	snrnp200	99	89.422	ENSEASG00005001884	SNRNP200	100	89.329	Equus_asinus_asinus
ENSPFOG00000015110	snrnp200	99	90.407	ENSECAG00000019675	SNRNP200	100	90.407	Equus_caballus
ENSPFOG00000015110	snrnp200	88	96.970	ENSEEUG00000012178	SNRNP200	93	96.970	Erinaceus_europaeus
ENSPFOG00000015110	snrnp200	99	95.397	ENSELUG00000018948	snrnp200	100	95.323	Esox_lucius
ENSPFOG00000015110	snrnp200	99	90.454	ENSFCAG00000010699	SNRNP200	100	90.454	Felis_catus
ENSPFOG00000015110	snrnp200	93	85.714	ENSFALG00000001368	-	94	85.714	Ficedula_albicollis
ENSPFOG00000015110	snrnp200	99	90.173	ENSFDAG00000004683	SNRNP200	100	90.173	Fukomys_damarensis
ENSPFOG00000015110	snrnp200	100	96.350	ENSFHEG00000003786	snrnp200	100	96.350	Fundulus_heteroclitus
ENSPFOG00000015110	snrnp200	100	94.442	ENSGMOG00000004881	snrnp200	99	94.302	Gadus_morhua
ENSPFOG00000015110	snrnp200	100	96.818	ENSGAFG00000010807	snrnp200	100	96.818	Gambusia_affinis
ENSPFOG00000015110	snrnp200	100	96.405	ENSGACG00000011474	snrnp200	99	96.405	Gasterosteus_aculeatus
ENSPFOG00000015110	snrnp200	95	92.169	ENSGAGG00000016069	SNRNP200	98	96.774	Gopherus_agassizii
ENSPFOG00000015110	snrnp200	99	90.360	ENSGGOG00000005174	SNRNP200	100	90.360	Gorilla_gorilla
ENSPFOG00000015110	snrnp200	97	94.127	ENSHBUG00000011322	snrnp200	99	94.177	Haplochromis_burtoni
ENSPFOG00000015110	snrnp200	99	90.220	ENSHGLG00000006654	SNRNP200	100	90.220	Heterocephalus_glaber_female
ENSPFOG00000015110	snrnp200	99	90.220	ENSHGLG00100018594	SNRNP200	100	90.220	Heterocephalus_glaber_male
ENSPFOG00000015110	snrnp200	99	90.454	ENSSTOG00000016351	SNRNP200	100	90.454	Ictidomys_tridecemlineatus
ENSPFOG00000015110	snrnp200	99	90.126	ENSJJAG00000023659	Snrnp200	100	90.126	Jaculus_jaculus
ENSPFOG00000015110	snrnp200	100	94.683	ENSKMAG00000003665	snrnp200	100	94.683	Kryptolebias_marmoratus
ENSPFOG00000015110	snrnp200	100	96.865	ENSLBEG00000021585	snrnp200	100	96.865	Labrus_bergylta
ENSPFOG00000015110	snrnp200	82	92.268	ENSLACG00000000226	SNRNP200	100	92.268	Latimeria_chalumnae
ENSPFOG00000015110	snrnp200	100	93.408	ENSLOCG00000015198	snrnp200	100	93.408	Lepisosteus_oculatus
ENSPFOG00000015110	snrnp200	99	90.267	ENSLAFG00000015626	SNRNP200	100	90.267	Loxodonta_africana
ENSPFOG00000015110	snrnp200	99	90.314	ENSMFAG00000040174	SNRNP200	99	91.884	Macaca_fascicularis
ENSPFOG00000015110	snrnp200	99	90.314	ENSMMUG00000023261	SNRNP200	100	90.314	Macaca_mulatta
ENSPFOG00000015110	snrnp200	99	90.267	ENSMNEG00000032398	SNRNP200	100	90.267	Macaca_nemestrina
ENSPFOG00000015110	snrnp200	99	90.360	ENSMLEG00000019083	SNRNP200	99	91.884	Mandrillus_leucophaeus
ENSPFOG00000015110	snrnp200	100	96.118	ENSMAMG00000007851	snrnp200	100	96.071	Mastacembelus_armatus
ENSPFOG00000015110	snrnp200	97	94.127	ENSMZEG00005010787	snrnp200	99	94.177	Maylandia_zebra
ENSPFOG00000015110	snrnp200	97	90.474	ENSMGAG00000001831	SNRNP200	99	90.432	Meleagris_gallopavo
ENSPFOG00000015110	snrnp200	99	90.407	ENSMAUG00000011825	Snrnp200	100	90.407	Mesocricetus_auratus
ENSPFOG00000015110	snrnp200	99	90.407	ENSMICG00000004710	SNRNP200	100	90.407	Microcebus_murinus
ENSPFOG00000015110	snrnp200	99	88.629	ENSMOCG00000011814	Snrnp200	100	88.629	Microtus_ochrogaster
ENSPFOG00000015110	snrnp200	99	94.784	ENSMMOG00000014167	snrnp200	100	94.712	Mola_mola
ENSPFOG00000015110	snrnp200	99	90.594	ENSMODG00000008475	SNRNP200	100	90.594	Monodelphis_domestica
ENSPFOG00000015110	snrnp200	100	96.631	ENSMALG00000001973	snrnp200	100	96.631	Monopterus_albus
ENSPFOG00000015110	snrnp200	99	90.267	MGP_CAROLIEiJ_G0024250	Snrnp200	100	90.267	Mus_caroli
ENSPFOG00000015110	snrnp200	99	90.314	ENSMUSG00000003660	Snrnp200	100	90.314	Mus_musculus
ENSPFOG00000015110	snrnp200	99	90.314	MGP_PahariEiJ_G0025695	Snrnp200	100	90.314	Mus_pahari
ENSPFOG00000015110	snrnp200	99	90.314	MGP_SPRETEiJ_G0025170	Snrnp200	100	91.160	Mus_spretus
ENSPFOG00000015110	snrnp200	99	90.454	ENSMPUG00000008949	SNRNP200	100	90.454	Mustela_putorius_furo
ENSPFOG00000015110	snrnp200	99	90.000	ENSMLUG00000010493	SNRNP200	100	90.000	Myotis_lucifugus
ENSPFOG00000015110	snrnp200	99	87.131	ENSMLUG00000027511	-	100	87.131	Myotis_lucifugus
ENSPFOG00000015110	snrnp200	99	90.360	ENSNGAG00000021993	Snrnp200	100	90.360	Nannospalax_galili
ENSPFOG00000015110	snrnp200	90	96.752	ENSNBRG00000017960	snrnp200	98	96.752	Neolamprologus_brichardi
ENSPFOG00000015110	snrnp200	99	86.059	ENSNLEG00000000025	SNRNP200	100	86.106	Nomascus_leucogenys
ENSPFOG00000015110	snrnp200	99	92.784	ENSMEUG00000010532	SNRNP200	79	90.476	Notamacropus_eugenii
ENSPFOG00000015110	snrnp200	96	89.256	ENSOPRG00000015464	SNRNP200	100	87.038	Ochotona_princeps
ENSPFOG00000015110	snrnp200	99	90.267	ENSODEG00000008366	SNRNP200	100	90.267	Octodon_degus
ENSPFOG00000015110	snrnp200	100	96.584	ENSONIG00000010714	snrnp200	100	96.584	Oreochromis_niloticus
ENSPFOG00000015110	snrnp200	99	90.314	ENSOCUG00000009864	SNRNP200	100	90.314	Oryctolagus_cuniculus
ENSPFOG00000015110	snrnp200	99	96.206	ENSORLG00000012286	snrnp200	100	96.345	Oryzias_latipes
ENSPFOG00000015110	snrnp200	99	96.393	ENSORLG00020004648	snrnp200	100	96.393	Oryzias_latipes_hni
ENSPFOG00000015110	snrnp200	99	96.300	ENSORLG00015019114	snrnp200	100	96.300	Oryzias_latipes_hsok
ENSPFOG00000015110	snrnp200	100	96.537	ENSOMEG00000011834	snrnp200	100	96.537	Oryzias_melastigma
ENSPFOG00000015110	snrnp200	99	90.407	ENSOGAG00000006879	SNRNP200	100	90.407	Otolemur_garnettii
ENSPFOG00000015110	snrnp200	99	89.429	ENSOARG00000013949	SNRNP200	100	89.429	Ovis_aries
ENSPFOG00000015110	snrnp200	99	90.360	ENSPPAG00000041559	SNRNP200	100	90.360	Pan_paniscus
ENSPFOG00000015110	snrnp200	99	90.454	ENSPPRG00000004435	SNRNP200	100	90.454	Panthera_pardus
ENSPFOG00000015110	snrnp200	99	90.033	ENSPTIG00000006380	SNRNP200	100	90.033	Panthera_tigris_altaica
ENSPFOG00000015110	snrnp200	99	90.360	ENSPTRG00000012230	SNRNP200	100	90.360	Pan_troglodytes
ENSPFOG00000015110	snrnp200	99	90.314	ENSPANG00000006017	SNRNP200	100	90.314	Papio_anubis
ENSPFOG00000015110	snrnp200	100	94.761	ENSPKIG00000014762	snrnp200	100	94.891	Paramormyrops_kingsleyae
ENSPFOG00000015110	snrnp200	99	89.757	ENSPSIG00000008580	SNRNP200	100	89.757	Pelodiscus_sinensis
ENSPFOG00000015110	snrnp200	99	90.407	ENSPCIG00000023050	SNRNP200	100	90.407	Phascolarctos_cinereus
ENSPFOG00000015110	snrnp200	97	99.780	ENSPLAG00000006711	snrnp200	99	99.780	Poecilia_latipinna
ENSPFOG00000015110	snrnp200	97	99.615	ENSPMEG00000021166	snrnp200	99	99.615	Poecilia_mexicana
ENSPFOG00000015110	snrnp200	100	99.485	ENSPREG00000008875	snrnp200	100	99.485	Poecilia_reticulata
ENSPFOG00000015110	snrnp200	99	90.360	ENSPPYG00000012068	SNRNP200	100	90.360	Pongo_abelii
ENSPFOG00000015110	snrnp200	95	95.513	ENSPCAG00000008536	SNRNP200	83	97.872	Procavia_capensis
ENSPFOG00000015110	snrnp200	99	90.360	ENSPCOG00000024608	SNRNP200	100	90.360	Propithecus_coquereli
ENSPFOG00000015110	snrnp200	96	90.286	ENSPVAG00000005860	SNRNP200	92	90.286	Pteropus_vampyrus
ENSPFOG00000015110	snrnp200	99	91.846	ENSPNYG00000017476	snrnp200	100	91.787	Pundamilia_nyererei
ENSPFOG00000015110	snrnp200	100	89.663	ENSPNAG00000010998	snrnp200	100	89.663	Pygocentrus_nattereri
ENSPFOG00000015110	snrnp200	99	90.407	ENSRNOG00000012157	Snrnp200	100	90.407	Rattus_norvegicus
ENSPFOG00000015110	snrnp200	99	90.360	ENSRBIG00000044690	-	100	90.360	Rhinopithecus_bieti
ENSPFOG00000015110	snrnp200	99	90.360	ENSRROG00000037952	-	100	90.360	Rhinopithecus_roxellana
ENSPFOG00000015110	snrnp200	99	90.360	ENSSBOG00000035471	SNRNP200	100	90.360	Saimiri_boliviensis_boliviensis
ENSPFOG00000015110	snrnp200	97	90.377	ENSSHAG00000000758	SNRNP200	99	90.335	Sarcophilus_harrisii
ENSPFOG00000015110	snrnp200	99	94.411	ENSSFOG00015018826	snrnp200	100	94.341	Scleropages_formosus
ENSPFOG00000015110	snrnp200	100	96.537	ENSSMAG00000005463	snrnp200	100	96.537	Scophthalmus_maximus
ENSPFOG00000015110	snrnp200	100	97.239	ENSSDUG00000021410	snrnp200	100	97.239	Seriola_dumerili
ENSPFOG00000015110	snrnp200	100	97.005	ENSSLDG00000010884	snrnp200	100	97.005	Seriola_lalandi_dorsalis
ENSPFOG00000015110	snrnp200	95	87.936	ENSSARG00000010728	SNRNP200	96	87.903	Sorex_araneus
ENSPFOG00000015110	snrnp200	99	90.969	ENSSPUG00000003726	-	100	90.969	Sphenodon_punctatus
ENSPFOG00000015110	snrnp200	100	97.239	ENSSPAG00000001842	snrnp200	100	97.239	Stegastes_partitus
ENSPFOG00000015110	snrnp200	99	90.501	ENSSSCG00000008127	SNRNP200	100	90.501	Sus_scrofa
ENSPFOG00000015110	snrnp200	99	82.587	ENSTGUG00000014475	-	100	82.587	Taeniopygia_guttata
ENSPFOG00000015110	snrnp200	99	95.959	ENSTRUG00000001307	snrnp200	100	95.882	Takifugu_rubripes
ENSPFOG00000015110	snrnp200	99	91.354	ENSTNIG00000004320	snrnp200	100	83.879	Tetraodon_nigroviridis
ENSPFOG00000015110	snrnp200	82	93.897	ENSTBEG00000003329	-	67	93.897	Tupaia_belangeri
ENSPFOG00000015110	snrnp200	99	90.220	ENSTTRG00000004983	SNRNP200	100	90.220	Tursiops_truncatus
ENSPFOG00000015110	snrnp200	75	83.236	ENSUAMG00000008395	-	95	83.236	Ursus_americanus
ENSPFOG00000015110	snrnp200	99	90.454	ENSUMAG00000012385	SNRNP200	100	90.454	Ursus_maritimus
ENSPFOG00000015110	snrnp200	87	94.595	ENSVPAG00000006434	SNRNP200	66	94.595	Vicugna_pacos
ENSPFOG00000015110	snrnp200	99	90.243	ENSVVUG00000026247	SNRNP200	100	90.243	Vulpes_vulpes
ENSPFOG00000015110	snrnp200	99	90.323	ENSXETG00000001243	snrnp200	100	90.323	Xenopus_tropicalis
ENSPFOG00000015110	snrnp200	97	99.357	ENSXMAG00000002058	snrnp200	98	99.357	Xiphophorus_maculatus