EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000015180 (Gene tree)
Gene ID: 103154333
Gene Symbol: bms1
Alias: -
Full Name: BMS1 ribosome biogenesis factor
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 22608 bases
Position: chrKI519992.1:117772-140379
Accession: ZDB-GENE-060720-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000015249	AARP2CN	PF08142.12	2e-30	1	1
ENSPFOP00000026924	AARP2CN	PF08142.12	2.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000025508	-	4841	-	ENSPFOP00000026924	1238 (aa)	-	A0A096M683
ENSPFOT00000015271	-	4728	-	ENSPFOP00000015249	1049 (aa)	-	A0A087YB46

Gene Model

Click here to download ENSPFOG00000015180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000015180's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000015180	bms1	96	66.032	ENSG00000165733	BMS1	80	74.384	Homo_sapiens
ENSPFOG00000015180	bms1	98	79.190	ENSAPOG00000002296	bms1	96	83.628	Acanthochromis_polyacanthus
ENSPFOG00000015180	bms1	97	65.944	ENSAMEG00000016834	BMS1	79	74.265	Ailuropoda_melanoleuca
ENSPFOG00000015180	bms1	99	76.168	ENSACIG00000002588	bms1	95	81.081	Amphilophus_citrinellus
ENSPFOG00000015180	bms1	99	79.093	ENSAOCG00000018088	bms1	96	82.560	Amphiprion_ocellaris
ENSPFOG00000015180	bms1	99	78.880	ENSAPEG00000014673	bms1	99	75.829	Amphiprion_percula
ENSPFOG00000015180	bms1	99	77.381	ENSATEG00000023465	bms1	96	82.400	Anabas_testudineus
ENSPFOG00000015180	bms1	94	66.188	ENSAPLG00000003759	BMS1	85	70.619	Anas_platyrhynchos
ENSPFOG00000015180	bms1	99	64.448	ENSACAG00000004537	-	85	68.174	Anolis_carolinensis
ENSPFOG00000015180	bms1	95	66.506	ENSANAG00000023432	BMS1	80	74.384	Aotus_nancymaae
ENSPFOG00000015180	bms1	99	77.374	ENSACLG00000001294	bms1	97	81.350	Astatotilapia_calliptera
ENSPFOG00000015180	bms1	58	75.444	ENSAMXG00000011236	bms1	81	74.960	Astyanax_mexicanus
ENSPFOG00000015180	bms1	99	66.731	ENSBTAG00000012878	BMS1	79	75.123	Bos_taurus
ENSPFOG00000015180	bms1	84	58.394	WBGene00022021	Y61A9LA.10	91	56.593	Caenorhabditis_elegans
ENSPFOG00000015180	bms1	98	65.432	ENSCJAG00000021705	BMS1	86	66.507	Callithrix_jacchus
ENSPFOG00000015180	bms1	95	67.360	ENSCAFG00000007114	BMS1	79	74.384	Canis_familiaris
ENSPFOG00000015180	bms1	95	67.360	ENSCAFG00020025282	BMS1	79	74.384	Canis_lupus_dingo
ENSPFOG00000015180	bms1	99	66.538	ENSCHIG00000023251	BMS1	80	75.616	Capra_hircus
ENSPFOG00000015180	bms1	99	62.087	ENSCAPG00000008652	BMS1	86	66.458	Cavia_aperea
ENSPFOG00000015180	bms1	99	62.850	ENSCPOG00000000502	BMS1	86	67.500	Cavia_porcellus
ENSPFOG00000015180	bms1	98	56.037	ENSCCAG00000024969	-	68	64.453	Cebus_capucinus
ENSPFOG00000015180	bms1	79	55.098	ENSCATG00000008695	-	68	54.889	Cercocebus_atys
ENSPFOG00000015180	bms1	98	65.177	ENSCATG00000030625	-	80	73.645	Cercocebus_atys
ENSPFOG00000015180	bms1	95	66.026	ENSCLAG00000002446	BMS1	85	67.775	Chinchilla_lanigera
ENSPFOG00000015180	bms1	98	65.331	ENSCSAG00000011118	BMS1	80	73.892	Chlorocebus_sabaeus
ENSPFOG00000015180	bms1	99	61.421	ENSCHOG00000011055	BMS1	79	73.399	Choloepus_hoffmanni
ENSPFOG00000015180	bms1	97	67.026	ENSCPBG00000025581	BMS1	84	67.629	Chrysemys_picta_bellii
ENSPFOG00000015180	bms1	83	64.493	ENSCING00000003181	-	94	63.228	Ciona_intestinalis
ENSPFOG00000015180	bms1	79	53.630	ENSCSAVG00000004113	-	72	70.000	Ciona_savignyi
ENSPFOG00000015180	bms1	98	65.846	ENSCANG00000011609	BMS1	80	73.892	Colobus_angolensis_palliatus
ENSPFOG00000015180	bms1	99	59.582	ENSCGRG00001019461	Bms1	86	65.974	Cricetulus_griseus_chok1gshd
ENSPFOG00000015180	bms1	99	59.582	ENSCGRG00000009016	Bms1	86	65.974	Cricetulus_griseus_crigri
ENSPFOG00000015180	bms1	59	81.169	ENSCSEG00000002469	bms1	99	72.297	Cynoglossus_semilaevis
ENSPFOG00000015180	bms1	99	84.615	ENSCVAG00000008371	bms1	96	87.762	Cyprinodon_variegatus
ENSPFOG00000015180	bms1	99	69.391	ENSDARG00000054154	bms1	88	75.301	Danio_rerio
ENSPFOG00000015180	bms1	99	64.555	ENSDNOG00000015761	BMS1	79	74.631	Dasypus_novemcinctus
ENSPFOG00000015180	bms1	95	67.363	ENSDORG00000002982	Bms1	86	67.223	Dipodomys_ordii
ENSPFOG00000015180	bms1	89	65.314	FBgn0036686	CG7728	90	61.282	Drosophila_melanogaster
ENSPFOG00000015180	bms1	82	67.857	ENSETEG00000009554	BMS1	76	67.857	Echinops_telfairi
ENSPFOG00000015180	bms1	97	65.426	ENSEASG00005006894	BMS1	80	74.877	Equus_asinus_asinus
ENSPFOG00000015180	bms1	97	65.271	ENSECAG00000001358	BMS1	80	74.877	Equus_caballus
ENSPFOG00000015180	bms1	99	70.293	ENSELUG00000001756	bms1	92	76.812	Esox_lucius
ENSPFOG00000015180	bms1	96	71.197	ENSFCAG00000011220	BMS1	79	74.384	Felis_catus
ENSPFOG00000015180	bms1	99	64.861	ENSFALG00000006882	BMS1	84	69.565	Ficedula_albicollis
ENSPFOG00000015180	bms1	99	62.251	ENSFDAG00000001422	BMS1	80	73.153	Fukomys_damarensis
ENSPFOG00000015180	bms1	99	86.321	ENSFHEG00000003367	bms1	97	88.511	Fundulus_heteroclitus
ENSPFOG00000015180	bms1	99	69.671	ENSGMOG00000000718	bms1	86	82.586	Gadus_morhua
ENSPFOG00000015180	bms1	99	65.725	ENSGALG00000002624	BMS1	77	69.628	Gallus_gallus
ENSPFOG00000015180	bms1	59	80.218	ENSGAFG00000009067	bms1	96	80.218	Gambusia_affinis
ENSPFOG00000015180	bms1	96	82.201	ENSGACG00000015334	bms1	89	80.707	Gasterosteus_aculeatus
ENSPFOG00000015180	bms1	99	67.132	ENSGAGG00000003467	BMS1	85	67.886	Gopherus_agassizii
ENSPFOG00000015180	bms1	99	77.612	ENSHBUG00000022628	bms1	97	81.350	Haplochromis_burtoni
ENSPFOG00000015180	bms1	99	63.957	ENSHGLG00000000477	BMS1	86	67.223	Heterocephalus_glaber_female
ENSPFOG00000015180	bms1	99	63.957	ENSHGLG00100002176	BMS1	86	67.223	Heterocephalus_glaber_male
ENSPFOG00000015180	bms1	99	75.820	ENSHCOG00000017604	bms1	96	78.905	Hippocampus_comes
ENSPFOG00000015180	bms1	98	80.983	ENSIPUG00000017855	bms1	99	68.325	Ictalurus_punctatus
ENSPFOG00000015180	bms1	99	64.608	ENSSTOG00000015063	BMS1	86	67.292	Ictidomys_tridecemlineatus
ENSPFOG00000015180	bms1	91	70.874	ENSJJAG00000017328	Bms1	85	67.647	Jaculus_jaculus
ENSPFOG00000015180	bms1	66	69.555	ENSKMAG00000021982	bms1	92	80.113	Kryptolebias_marmoratus
ENSPFOG00000015180	bms1	99	75.967	ENSLBEG00000028208	bms1	97	79.618	Labrus_bergylta
ENSPFOG00000015180	bms1	99	56.353	ENSLACG00000001600	BMS1	86	65.073	Latimeria_chalumnae
ENSPFOG00000015180	bms1	61	73.252	ENSLOCG00000012914	bms1	89	69.147	Lepisosteus_oculatus
ENSPFOG00000015180	bms1	98	64.407	ENSLAFG00000006250	BMS1	79	73.399	Loxodonta_africana
ENSPFOG00000015180	bms1	87	63.158	ENSMFAG00000037771	BMS1	86	73.892	Macaca_fascicularis
ENSPFOG00000015180	bms1	87	59.142	ENSMMUG00000007426	-	75	61.554	Macaca_mulatta
ENSPFOG00000015180	bms1	78	56.633	ENSMLEG00000029084	-	64	65.372	Mandrillus_leucophaeus
ENSPFOG00000015180	bms1	99	76.438	ENSMAMG00000020855	bms1	97	81.541	Mastacembelus_armatus
ENSPFOG00000015180	bms1	99	77.281	ENSMZEG00005005663	bms1	97	81.350	Maylandia_zebra
ENSPFOG00000015180	bms1	95	69.530	ENSMGAG00000001170	BMS1	86	69.467	Meleagris_gallopavo
ENSPFOG00000015180	bms1	98	60.188	ENSMAUG00000002195	Bms1	86	66.320	Mesocricetus_auratus
ENSPFOG00000015180	bms1	99	64.768	ENSMICG00000009977	BMS1	79	74.384	Microcebus_murinus
ENSPFOG00000015180	bms1	99	65.158	ENSMOCG00000002038	Bms1	86	66.528	Microtus_ochrogaster
ENSPFOG00000015180	bms1	99	77.465	ENSMMOG00000000977	bms1	95	81.059	Mola_mola
ENSPFOG00000015180	bms1	99	61.752	ENSMODG00000001177	BMS1	78	74.939	Monodelphis_domestica
ENSPFOG00000015180	bms1	99	77.058	ENSMALG00000009680	bms1	96	82.051	Monopterus_albus
ENSPFOG00000015180	bms1	78	76.596	MGP_CAROLIEiJ_G0028785	-	73	76.923	Mus_caroli
ENSPFOG00000015180	bms1	96	69.903	ENSMUSG00000030138	Bms1	86	65.560	Mus_musculus
ENSPFOG00000015180	bms1	99	61.578	MGP_PahariEiJ_G0022539	Bms1	86	66.042	Mus_pahari
ENSPFOG00000015180	bms1	99	61.026	MGP_SPRETEiJ_G0029816	Bms1	86	65.145	Mus_spretus
ENSPFOG00000015180	bms1	97	66.822	ENSMPUG00000017276	BMS1	79	74.631	Mustela_putorius_furo
ENSPFOG00000015180	bms1	100	60.606	ENSMLUG00000003260	BMS1	80	73.775	Myotis_lucifugus
ENSPFOG00000015180	bms1	99	54.454	ENSNGAG00000015258	Bms1	82	66.026	Nannospalax_galili
ENSPFOG00000015180	bms1	98	63.692	ENSNLEG00000015791	BMS1	85	66.183	Nomascus_leucogenys
ENSPFOG00000015180	bms1	84	78.022	ENSOPRG00000005195	BMS1	77	79.189	Ochotona_princeps
ENSPFOG00000015180	bms1	99	59.813	ENSODEG00000005554	BMS1	86	67.149	Octodon_degus
ENSPFOG00000015180	bms1	99	77.716	ENSONIG00000007227	bms1	97	81.481	Oreochromis_niloticus
ENSPFOG00000015180	bms1	99	62.371	ENSOANG00000000662	-	79	74.201	Ornithorhynchus_anatinus
ENSPFOG00000015180	bms1	95	68.006	ENSOCUG00000005354	BMS1	80	75.123	Oryctolagus_cuniculus
ENSPFOG00000015180	bms1	99	78.351	ENSORLG00000014655	bms1	96	83.981	Oryzias_latipes
ENSPFOG00000015180	bms1	99	75.818	ENSORLG00020016246	bms1	99	75.848	Oryzias_latipes_hni
ENSPFOG00000015180	bms1	99	75.527	ENSORLG00015014183	bms1	89	77.989	Oryzias_latipes_hsok
ENSPFOG00000015180	bms1	99	78.839	ENSOMEG00000015042	bms1	95	84.142	Oryzias_melastigma
ENSPFOG00000015180	bms1	99	59.573	ENSOGAG00000006511	BMS1	79	74.265	Otolemur_garnettii
ENSPFOG00000015180	bms1	99	66.027	ENSOARG00000003900	BMS1	80	74.878	Ovis_aries
ENSPFOG00000015180	bms1	96	61.637	ENSPPAG00000027837	BMS1	80	74.138	Pan_paniscus
ENSPFOG00000015180	bms1	99	59.529	ENSPPRG00000001311	BMS1	79	74.384	Panthera_pardus
ENSPFOG00000015180	bms1	99	58.498	ENSPTIG00000009652	BMS1	79	74.384	Panthera_tigris_altaica
ENSPFOG00000015180	bms1	96	66.561	ENSPTRG00000002441	BMS1	80	74.138	Pan_troglodytes
ENSPFOG00000015180	bms1	98	76.236	ENSPKIG00000008165	bms1	87	75.439	Paramormyrops_kingsleyae
ENSPFOG00000015180	bms1	96	66.981	ENSPSIG00000006481	BMS1	84	68.973	Pelodiscus_sinensis
ENSPFOG00000015180	bms1	98	66.197	ENSPEMG00000022467	Bms1	85	65.690	Peromyscus_maniculatus_bairdii
ENSPFOG00000015180	bms1	95	68.174	ENSPCIG00000001339	BMS1	78	74.201	Phascolarctos_cinereus
ENSPFOG00000015180	bms1	100	99.523	ENSPMEG00000023176	bms1	91	99.808	Poecilia_mexicana
ENSPFOG00000015180	bms1	100	97.526	ENSPREG00000002695	bms1	98	96.552	Poecilia_reticulata
ENSPFOG00000015180	bms1	50	64.933	ENSPPYG00000002836	-	67	74.138	Pongo_abelii
ENSPFOG00000015180	bms1	69	75.342	ENSPCAG00000014528	BMS1	70	75.342	Procavia_capensis
ENSPFOG00000015180	bms1	99	62.785	ENSPCOG00000023834	-	81	73.421	Propithecus_coquereli
ENSPFOG00000015180	bms1	99	59.217	ENSPVAG00000000725	BMS1	80	73.219	Pteropus_vampyrus
ENSPFOG00000015180	bms1	99	76.195	ENSPNYG00000018866	bms1	95	81.906	Pundamilia_nyererei
ENSPFOG00000015180	bms1	90	76.206	ENSPNAG00000000676	bms1	89	76.367	Pygocentrus_nattereri
ENSPFOG00000015180	bms1	78	61.168	ENSRNOG00000006576	Bms1	83	66.496	Rattus_norvegicus
ENSPFOG00000015180	bms1	97	65.794	ENSRROG00000040101	BMS1	80	69.951	Rhinopithecus_roxellana
ENSPFOG00000015180	bms1	67	53.582	YPL217C	-	75	53.295	Saccharomyces_cerevisiae
ENSPFOG00000015180	bms1	95	67.311	ENSSBOG00000035778	BMS1	86	66.035	Saimiri_boliviensis_boliviensis
ENSPFOG00000015180	bms1	99	63.636	ENSSHAG00000005062	BMS1	78	74.201	Sarcophilus_harrisii
ENSPFOG00000015180	bms1	62	76.769	ENSSFOG00015022313	bms1	80	82.064	Scleropages_formosus
ENSPFOG00000015180	bms1	68	74.830	ENSSMAG00000019966	bms1	96	81.250	Scophthalmus_maximus
ENSPFOG00000015180	bms1	99	78.091	ENSSDUG00000016875	bms1	95	83.871	Seriola_dumerili
ENSPFOG00000015180	bms1	99	77.215	ENSSLDG00000015199	bms1	99	73.071	Seriola_lalandi_dorsalis
ENSPFOG00000015180	bms1	59	72.000	ENSSARG00000014407	BMS1	67	72.000	Sorex_araneus
ENSPFOG00000015180	bms1	98	69.839	ENSSPUG00000014454	BMS1	84	68.971	Sphenodon_punctatus
ENSPFOG00000015180	bms1	98	65.846	ENSSSCG00000010198	BMS1	79	75.123	Sus_scrofa
ENSPFOG00000015180	bms1	99	65.882	ENSTGUG00000006302	-	84	69.417	Taeniopygia_guttata
ENSPFOG00000015180	bms1	99	71.361	ENSTRUG00000008028	bms1	94	75.285	Takifugu_rubripes
ENSPFOG00000015180	bms1	99	75.203	ENSTNIG00000006216	bms1	83	81.925	Tetraodon_nigroviridis
ENSPFOG00000015180	bms1	65	68.898	ENSTBEG00000001673	-	62	66.553	Tupaia_belangeri
ENSPFOG00000015180	bms1	99	63.173	ENSTTRG00000007983	BMS1	77	79.189	Tursiops_truncatus
ENSPFOG00000015180	bms1	97	66.512	ENSUAMG00000023996	BMS1	79	74.631	Ursus_americanus
ENSPFOG00000015180	bms1	97	66.202	ENSUMAG00000016523	BMS1	79	74.631	Ursus_maritimus
ENSPFOG00000015180	bms1	90	71.034	ENSVPAG00000007477	BMS1	74	71.121	Vicugna_pacos
ENSPFOG00000015180	bms1	95	67.360	ENSVVUG00000021305	BMS1	79	74.384	Vulpes_vulpes
ENSPFOG00000015180	bms1	89	69.458	ENSXETG00000008158	bms1	90	60.595	Xenopus_tropicalis
ENSPFOG00000015180	bms1	100	91.061	ENSXCOG00000000506	bms1	96	97.537	Xiphophorus_couchianus
ENSPFOG00000015180	bms1	100	96.008	ENSXMAG00000014236	bms1	97	96.169	Xiphophorus_maculatus