EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000015409 (Gene tree)
Gene ID: 103147350
Gene Symbol: si:dkey-13a21.4
Alias: -
Full Name: ras-related protein Rab-7a-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 2422 bases
Position: chrKI519791.1:45385-47806
Accession: 103147350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000015472	MMR_HSR1	PF01926.23	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000015494	-	1354	-	ENSPFOP00000015472	204 (aa)	XP_007565703	A0A087YBR9

Gene Model

Click here to download ENSPFOG00000015409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000015409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000015409	si:dkey-13a21.4	94	31.959	ENSPFOG00000019144	-	78	31.959
ENSPFOG00000015409	si:dkey-13a21.4	77	38.365	ENSPFOG00000004838	rab42a	59	38.365
ENSPFOG00000015409	si:dkey-13a21.4	73	38.000	ENSPFOG00000000349	rab33ba	61	38.000
ENSPFOG00000015409	si:dkey-13a21.4	77	38.125	ENSPFOG00000004492	RAB39B	74	38.125
ENSPFOG00000015409	si:dkey-13a21.4	83	42.353	ENSPFOG00000006655	rab35b	82	42.353
ENSPFOG00000015409	si:dkey-13a21.4	74	36.538	ENSPFOG00000022360	-	64	36.538
ENSPFOG00000015409	si:dkey-13a21.4	77	32.911	ENSPFOG00000024114	-	71	32.911
ENSPFOG00000015409	si:dkey-13a21.4	76	39.355	ENSPFOG00000007571	rab18a	75	39.355
ENSPFOG00000015409	si:dkey-13a21.4	83	50.877	ENSPFOG00000020060	rab9b	85	50.877
ENSPFOG00000015409	si:dkey-13a21.4	65	31.343	ENSPFOG00000024387	rras2	76	31.343
ENSPFOG00000015409	si:dkey-13a21.4	96	32.836	ENSPFOG00000019509	rab6a	94	32.836
ENSPFOG00000015409	si:dkey-13a21.4	84	35.838	ENSPFOG00000017775	rab15	79	35.838
ENSPFOG00000015409	si:dkey-13a21.4	97	50.249	ENSPFOG00000003465	RAB7A	97	50.249
ENSPFOG00000015409	si:dkey-13a21.4	71	31.724	ENSPFOG00000002595	hrasb	80	32.692
ENSPFOG00000015409	si:dkey-13a21.4	83	37.059	ENSPFOG00000004746	si:dkey-16l2.16	79	37.059
ENSPFOG00000015409	si:dkey-13a21.4	88	34.254	ENSPFOG00000014630	rab4a	83	34.254
ENSPFOG00000015409	si:dkey-13a21.4	77	32.911	ENSPFOG00000006159	rab11ba	71	32.911
ENSPFOG00000015409	si:dkey-13a21.4	81	51.807	ENSPFOG00000024704	rab9a	83	51.807
ENSPFOG00000015409	si:dkey-13a21.4	84	33.140	ENSPFOG00000019821	RAB14	78	33.140
ENSPFOG00000015409	si:dkey-13a21.4	80	30.723	ENSPFOG00000020516	rasd4	77	30.723
ENSPFOG00000015409	si:dkey-13a21.4	77	32.911	ENSPFOG00000006224	-	71	32.911
ENSPFOG00000015409	si:dkey-13a21.4	76	35.032	ENSPFOG00000006335	dnajc27	58	35.032
ENSPFOG00000015409	si:dkey-13a21.4	75	30.968	ENSPFOG00000001515	rhebl1	82	30.968
ENSPFOG00000015409	si:dkey-13a21.4	77	34.177	ENSPFOG00000009284	rab11a	72	34.177
ENSPFOG00000015409	si:dkey-13a21.4	79	32.927	ENSPFOG00000013066	RAB29	79	32.927
ENSPFOG00000015409	si:dkey-13a21.4	76	30.128	ENSPFOG00000008678	si:cabz01085950.1	75	30.128
ENSPFOG00000015409	si:dkey-13a21.4	79	36.420	ENSPFOG00000014418	-	79	36.420
ENSPFOG00000015409	si:dkey-13a21.4	96	33.333	ENSPFOG00000003742	rab6ba	94	33.333
ENSPFOG00000015409	si:dkey-13a21.4	79	38.272	ENSPFOG00000013810	zgc:171927	73	38.272
ENSPFOG00000015409	si:dkey-13a21.4	79	34.146	ENSPFOG00000001579	rab12	66	34.146
ENSPFOG00000015409	si:dkey-13a21.4	79	35.583	ENSPFOG00000011263	rab5aa	74	35.583
ENSPFOG00000015409	si:dkey-13a21.4	77	37.736	ENSPFOG00000012977	rab22a	80	37.736
ENSPFOG00000015409	si:dkey-13a21.4	87	53.371	ENSPFOG00000003934	-	86	53.371
ENSPFOG00000015409	si:dkey-13a21.4	95	45.178	ENSPFOG00000022477	-	89	45.178
ENSPFOG00000015409	si:dkey-13a21.4	88	34.426	ENSPFOG00000008547	rab34a	58	34.426
ENSPFOG00000015409	si:dkey-13a21.4	80	36.970	ENSPFOG00000000498	-	78	36.970
ENSPFOG00000015409	si:dkey-13a21.4	96	34.804	ENSPFOG00000004037	rab33a	70	34.804
ENSPFOG00000015409	si:dkey-13a21.4	79	37.423	ENSPFOG00000013027	rab22a	97	37.423
ENSPFOG00000015409	si:dkey-13a21.4	79	35.583	ENSPFOG00000023458	rab5c	72	35.583
ENSPFOG00000015409	si:dkey-13a21.4	97	32.212	ENSPFOG00000013182	RAB15	97	32.212
ENSPFOG00000015409	si:dkey-13a21.4	80	36.970	ENSPFOG00000001829	rab1ab	79	36.970
ENSPFOG00000015409	si:dkey-13a21.4	85	34.286	ENSPFOG00000001167	-	80	34.286
ENSPFOG00000015409	si:dkey-13a21.4	75	31.613	ENSPFOG00000004921	rheb	82	31.613
ENSPFOG00000015409	si:dkey-13a21.4	88	33.880	ENSPFOG00000011444	rab34b	71	33.880
ENSPFOG00000015409	si:dkey-13a21.4	79	35.583	ENSPFOG00000004786	rab2a	75	35.583
ENSPFOG00000015409	si:dkey-13a21.4	76	41.290	ENSPFOG00000013491	rab18b	74	41.290
ENSPFOG00000015409	si:dkey-13a21.4	77	38.365	ENSPFOG00000004684	-	73	38.365
ENSPFOG00000015409	si:dkey-13a21.4	91	37.097	ENSPFOG00000011493	rab23	77	37.097
ENSPFOG00000015409	si:dkey-13a21.4	71	31.034	ENSPFOG00000015499	kras	80	32.051
ENSPFOG00000015409	si:dkey-13a21.4	79	33.742	ENSPFOG00000005901	-	71	33.742
ENSPFOG00000015409	si:dkey-13a21.4	75	34.839	ENSPFOG00000010632	rab25a	70	34.839
ENSPFOG00000015409	si:dkey-13a21.4	99	33.014	ENSPFOG00000011424	RAB41	97	33.014
ENSPFOG00000015409	si:dkey-13a21.4	90	40.000	ENSPFOG00000005479	rab30	89	40.000
ENSPFOG00000015409	si:dkey-13a21.4	79	35.583	ENSPFOG00000012082	rab5c	72	35.583
ENSPFOG00000015409	si:dkey-13a21.4	77	36.646	ENSPFOG00000014499	si:dkey-34d22.5	71	36.646
ENSPFOG00000015409	si:dkey-13a21.4	75	37.179	ENSPFOG00000009101	-	65	37.179
ENSPFOG00000015409	si:dkey-13a21.4	94	31.959	ENSPFOG00000006314	-	78	31.959
ENSPFOG00000015409	si:dkey-13a21.4	84	36.416	ENSPFOG00000011310	rab25b	81	36.416
ENSPFOG00000015409	si:dkey-13a21.4	80	34.132	ENSPFOG00000011316	rab11al	75	34.132
ENSPFOG00000015409	si:dkey-13a21.4	80	35.152	ENSPFOG00000012594	rab1ba	75	35.152

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000015409	si:dkey-13a21.4	100	82.843	ENSACIG00000011024	si:dkey-13a21.4	100	82.843	Amphilophus_citrinellus
ENSPFOG00000015409	si:dkey-13a21.4	100	82.353	ENSAOCG00000020491	si:dkey-13a21.4	100	82.353	Amphiprion_ocellaris
ENSPFOG00000015409	si:dkey-13a21.4	100	82.353	ENSAPEG00000023338	si:dkey-13a21.4	92	82.353	Amphiprion_percula
ENSPFOG00000015409	si:dkey-13a21.4	100	80.392	ENSATEG00000014958	si:dkey-13a21.4	100	80.392	Anabas_testudineus
ENSPFOG00000015409	si:dkey-13a21.4	96	51.795	ENSACAG00000012345	-	97	51.795	Anolis_carolinensis
ENSPFOG00000015409	si:dkey-13a21.4	100	82.843	ENSACLG00000021109	si:dkey-13a21.4	99	82.843	Astatotilapia_calliptera
ENSPFOG00000015409	si:dkey-13a21.4	100	51.659	ENSAMXG00000032663	si:dkey-13a21.4	97	51.659	Astyanax_mexicanus
ENSPFOG00000015409	si:dkey-13a21.4	89	53.005	WBGene00004271	rab-7	100	48.325	Caenorhabditis_elegans
ENSPFOG00000015409	si:dkey-13a21.4	100	91.176	ENSCVAG00000001150	si:dkey-13a21.4	100	91.176	Cyprinodon_variegatus
ENSPFOG00000015409	si:dkey-13a21.4	100	61.765	ENSDARG00000026098	si:dkey-13a21.4	99	61.765	Danio_rerio
ENSPFOG00000015409	si:dkey-13a21.4	87	50.000	ENSDNOG00000043559	-	96	47.475	Dasypus_novemcinctus
ENSPFOG00000015409	si:dkey-13a21.4	100	88.293	ENSFHEG00000002502	si:dkey-13a21.4	100	88.293	Fundulus_heteroclitus
ENSPFOG00000015409	si:dkey-13a21.4	100	98.039	ENSGAFG00000020102	si:dkey-13a21.4	100	98.039	Gambusia_affinis
ENSPFOG00000015409	si:dkey-13a21.4	100	83.333	ENSHBUG00000014023	si:dkey-13a21.4	99	83.333	Haplochromis_burtoni
ENSPFOG00000015409	si:dkey-13a21.4	86	80.682	ENSKMAG00000021039	si:dkey-13a21.4	74	80.682	Kryptolebias_marmoratus
ENSPFOG00000015409	si:dkey-13a21.4	100	82.843	ENSLBEG00000018180	si:dkey-13a21.4	100	82.843	Labrus_bergylta
ENSPFOG00000015409	si:dkey-13a21.4	100	58.252	ENSLOCG00000014749	si:dkey-13a21.4	100	58.252	Lepisosteus_oculatus
ENSPFOG00000015409	si:dkey-13a21.4	84	55.556	ENSLAFG00000028984	-	83	55.556	Loxodonta_africana
ENSPFOG00000015409	si:dkey-13a21.4	100	81.373	ENSMAMG00000021095	si:dkey-13a21.4	100	81.373	Mastacembelus_armatus
ENSPFOG00000015409	si:dkey-13a21.4	100	82.843	ENSMZEG00005010220	si:dkey-13a21.4	99	82.843	Maylandia_zebra
ENSPFOG00000015409	si:dkey-13a21.4	99	83.168	ENSNBRG00000023214	si:dkey-13a21.4	98	83.168	Neolamprologus_brichardi
ENSPFOG00000015409	si:dkey-13a21.4	100	82.843	ENSONIG00000020296	si:dkey-13a21.4	100	82.843	Oreochromis_niloticus
ENSPFOG00000015409	si:dkey-13a21.4	100	79.412	ENSORLG00000025098	si:dkey-13a21.4	100	79.412	Oryzias_latipes
ENSPFOG00000015409	si:dkey-13a21.4	100	79.902	ENSORLG00020019465	si:dkey-13a21.4	100	79.902	Oryzias_latipes_hni
ENSPFOG00000015409	si:dkey-13a21.4	100	79.902	ENSORLG00015015121	si:dkey-13a21.4	100	79.902	Oryzias_latipes_hsok
ENSPFOG00000015409	si:dkey-13a21.4	96	61.929	ENSPKIG00000008691	si:dkey-13a21.4	96	61.929	Paramormyrops_kingsleyae
ENSPFOG00000015409	si:dkey-13a21.4	99	75.248	ENSPMGG00000023170	si:dkey-13a21.4	96	75.248	Periophthalmus_magnuspinnatus
ENSPFOG00000015409	si:dkey-13a21.4	100	100.000	ENSPLAG00000019688	si:dkey-13a21.4	100	100.000	Poecilia_latipinna
ENSPFOG00000015409	si:dkey-13a21.4	100	100.000	ENSPMEG00000019159	si:dkey-13a21.4	100	100.000	Poecilia_mexicana
ENSPFOG00000015409	si:dkey-13a21.4	100	97.549	ENSPREG00000022241	si:dkey-13a21.4	100	97.549	Poecilia_reticulata
ENSPFOG00000015409	si:dkey-13a21.4	100	82.843	ENSPNYG00000018613	si:dkey-13a21.4	99	82.843	Pundamilia_nyererei
ENSPFOG00000015409	si:dkey-13a21.4	96	43.781	YML001W	YPT7	96	43.781	Saccharomyces_cerevisiae
ENSPFOG00000015409	si:dkey-13a21.4	96	60.714	ENSSFOG00015009566	si:dkey-13a21.4	96	60.714	Scleropages_formosus
ENSPFOG00000015409	si:dkey-13a21.4	99	80.296	ENSSMAG00000013945	si:dkey-13a21.4	99	80.296	Scophthalmus_maximus
ENSPFOG00000015409	si:dkey-13a21.4	100	84.314	ENSSDUG00000019738	si:dkey-13a21.4	100	84.314	Seriola_dumerili
ENSPFOG00000015409	si:dkey-13a21.4	100	84.314	ENSSLDG00000011597	si:dkey-13a21.4	100	84.314	Seriola_lalandi_dorsalis
ENSPFOG00000015409	si:dkey-13a21.4	96	53.333	ENSXETG00000014257	mgc75872	97	53.333	Xenopus_tropicalis