EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPFOG00000015446 (Gene tree)
Gene ID: 103138153
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 19759 bases
Position: chrKI519657.1:956039-975797
Accession: 103138153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000015567	KH_1	PF00013.29	8.6e-55	1	3
ENSPFOP00000015567	KH_1	PF00013.29	8.6e-55	2	3
ENSPFOP00000015567	KH_1	PF00013.29	8.6e-55	3	3
ENSPFOP00000025291	KH_1	PF00013.29	1.9e-54	1	3
ENSPFOP00000025291	KH_1	PF00013.29	1.9e-54	2	3
ENSPFOP00000025291	KH_1	PF00013.29	1.9e-54	3	3
ENSPFOP00000015567	KH_2	PF07650.17	1.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000015589	-	2808	-	ENSPFOP00000015567	320 (aa)	XP_007552334	A0A087YC14
ENSPFOT00000023208	-	3000	-	ENSPFOP00000025291	384 (aa)	-	A0A096M1K0

Gene Model

Click here to download ENSPFOG00000015446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000015446's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000015446	-	78	52.857	ENSPFOG00000018830	hnrnpk	56	52.857
ENSPFOG00000015446	-	93	33.750	ENSPFOG00000007221	igf2bp2b	65	33.750
ENSPFOG00000015446	-	94	63.609	ENSPFOG00000002989	-	71	63.609
ENSPFOG00000015446	-	91	64.629	ENSPFOG00000014474	pcbp4	99	58.566
ENSPFOG00000015446	-	97	80.064	ENSPFOG00000008011	PCBP2	98	80.064
ENSPFOG00000015446	-	97	89.286	ENSPFOG00000015051	pcbp3	95	89.286
ENSPFOG00000015446	-	67	38.095	ENSPFOG00000004577	khsrp	64	38.095
ENSPFOG00000015446	-	99	78.438	ENSPFOG00000010086	pcbp2	99	78.438
ENSPFOG00000015446	-	68	37.333	ENSPFOG00000000238	fubp1	52	35.354
ENSPFOG00000015446	-	82	51.250	ENSPFOG00000013507	hnrpkl	89	30.049
ENSPFOG00000015446	-	94	36.364	ENSPFOG00000008400	-	68	41.270
ENSPFOG00000015446	-	89	39.062	ENSPFOG00000019842	FUBP3	69	38.462
ENSPFOG00000015446	-	76	40.845	ENSPFOG00000018009	nova1	59	40.845
ENSPFOG00000015446	-	97	34.507	ENSPFOG00000005971	igf2bp3	62	34.507
ENSPFOG00000015446	-	96	75.641	ENSPFOG00000002348	zgc:110045	97	75.641
ENSPFOG00000015446	-	93	39.437	ENSPFOG00000016392	-	60	39.437
ENSPFOG00000015446	-	94	30.657	ENSPFOG00000019586	igf2bp1	57	30.657