EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000016554 (Gene tree)
Gene ID: 103129615
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 6651 bases
Position: chrKI520170.1:268562-275212
Accession: 103129615
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000016651	ARS2	PF04959.13	2.8e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000016673	-	2770	XM_007540779	ENSPFOP00000016651	816 (aa)	XP_007540841	A0A087YF48

Gene Model

Click here to download ENSPFOG00000016554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000016554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000016554	-	54	65.293	ENSPFOG00000005704	srrt	93	52.682

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000016554	-	54	61.720	ENSG00000087087	SRRT	98	67.391	Homo_sapiens
ENSPFOG00000016554	-	54	64.363	ENSAPOG00000002304	srrt	93	54.771	Acanthochromis_polyacanthus
ENSPFOG00000016554	-	90	61.905	ENSAMEG00000014506	SRRT	79	61.388	Ailuropoda_melanoleuca
ENSPFOG00000016554	-	94	55.276	ENSACIG00000015795	srrt	92	54.962	Amphilophus_citrinellus
ENSPFOG00000016554	-	94	57.071	ENSAOCG00000009693	srrt	92	56.186	Amphiprion_ocellaris
ENSPFOG00000016554	-	93	75.371	ENSAOCG00000009189	-	98	76.066	Amphiprion_ocellaris
ENSPFOG00000016554	-	93	75.371	ENSAPEG00000020016	-	98	76.066	Amphiprion_percula
ENSPFOG00000016554	-	94	57.179	ENSAPEG00000003646	srrt	92	55.799	Amphiprion_percula
ENSPFOG00000016554	-	59	80.156	ENSATEG00000003652	-	86	83.991	Anabas_testudineus
ENSPFOG00000016554	-	94	56.384	ENSATEG00000014425	srrt	92	55.172	Anabas_testudineus
ENSPFOG00000016554	-	54	60.823	ENSACAG00000001014	SRRT	93	51.966	Anolis_carolinensis
ENSPFOG00000016554	-	54	60.805	ENSANAG00000031718	SRRT	93	52.862	Aotus_nancymaae
ENSPFOG00000016554	-	93	75.799	ENSACLG00000009423	-	98	76.146	Astatotilapia_calliptera
ENSPFOG00000016554	-	54	62.939	ENSAMXG00000016671	srrt	50	62.882	Astyanax_mexicanus
ENSPFOG00000016554	-	54	61.017	ENSBTAG00000001134	SRRT	93	52.375	Bos_taurus
ENSPFOG00000016554	-	70	37.500	WBGene00017085	E01A2.2	85	38.843	Caenorhabditis_elegans
ENSPFOG00000016554	-	54	61.017	ENSCJAG00000014917	SRRT	93	53.261	Callithrix_jacchus
ENSPFOG00000016554	-	96	53.647	ENSCAFG00000023538	SRRT	93	52.132	Canis_familiaris
ENSPFOG00000016554	-	98	53.738	ENSCAFG00020013358	SRRT	97	51.235	Canis_lupus_dingo
ENSPFOG00000016554	-	54	60.981	ENSCHIG00000010495	SRRT	93	52.132	Capra_hircus
ENSPFOG00000016554	-	96	53.333	ENSTSYG00000036426	SRRT	96	51.921	Carlito_syrichta
ENSPFOG00000016554	-	54	62.338	ENSCAPG00000013586	SRRT	97	54.187	Cavia_aperea
ENSPFOG00000016554	-	54	61.099	ENSCPOG00000001739	SRRT	93	53.285	Cavia_porcellus
ENSPFOG00000016554	-	54	60.805	ENSCCAG00000015877	SRRT	93	52.862	Cebus_capucinus
ENSPFOG00000016554	-	54	60.981	ENSCATG00000036306	SRRT	97	51.708	Cercocebus_atys
ENSPFOG00000016554	-	96	53.538	ENSCLAG00000007568	SRRT	93	52.984	Chinchilla_lanigera
ENSPFOG00000016554	-	54	60.805	ENSCSAG00000017996	SRRT	93	52.497	Chlorocebus_sabaeus
ENSPFOG00000016554	-	53	62.774	ENSCHOG00000007815	SRRT	64	56.173	Choloepus_hoffmanni
ENSPFOG00000016554	-	71	58.605	ENSCPBG00000011553	SRRT	75	57.561	Chrysemys_picta_bellii
ENSPFOG00000016554	-	100	39.798	ENSCING00000003506	-	54	47.479	Ciona_intestinalis
ENSPFOG00000016554	-	100	38.717	ENSCSAVG00000008394	-	82	52.326	Ciona_savignyi
ENSPFOG00000016554	-	54	60.981	ENSCANG00000034556	SRRT	93	52.862	Colobus_angolensis_palliatus
ENSPFOG00000016554	-	54	60.593	ENSCGRG00001001594	Srrt	93	53.567	Cricetulus_griseus_chok1gshd
ENSPFOG00000016554	-	72	60.390	ENSCGRG00000007292	Srrt	89	56.540	Cricetulus_griseus_crigri
ENSPFOG00000016554	-	96	51.211	ENSCSEG00000017878	srrt	50	58.134	Cynoglossus_semilaevis
ENSPFOG00000016554	-	93	68.495	ENSCSEG00000005233	-	98	68.171	Cynoglossus_semilaevis
ENSPFOG00000016554	-	94	56.501	ENSCVAG00000019848	srrt	92	56.051	Cyprinodon_variegatus
ENSPFOG00000016554	-	90	82.400	ENSCVAG00000017344	-	98	82.510	Cyprinodon_variegatus
ENSPFOG00000016554	-	94	63.812	ENSDARG00000017762	srrt	84	64.009	Danio_rerio
ENSPFOG00000016554	-	54	60.805	ENSDNOG00000003851	SRRT	93	52.300	Dasypus_novemcinctus
ENSPFOG00000016554	-	54	61.325	ENSDORG00000005584	Srrt	89	57.569	Dipodomys_ordii
ENSPFOG00000016554	-	89	46.047	FBgn0033062	Ars2	67	49.676	Drosophila_melanogaster
ENSPFOG00000016554	-	77	58.750	ENSETEG00000016175	SRRT	68	58.125	Echinops_telfairi
ENSPFOG00000016554	-	77	50.076	ENSEBUG00000008517	-	65	59.219	Eptatretus_burgeri
ENSPFOG00000016554	-	96	52.941	ENSEASG00005016956	SRRT	93	52.497	Equus_asinus_asinus
ENSPFOG00000016554	-	96	52.941	ENSECAG00000012292	SRRT	93	52.497	Equus_caballus
ENSPFOG00000016554	-	78	62.821	ENSEEUG00000009117	SRRT	85	56.677	Erinaceus_europaeus
ENSPFOG00000016554	-	85	64.240	ENSELUG00000006651	srrt	83	64.871	Esox_lucius
ENSPFOG00000016554	-	93	63.582	ENSELUG00000021216	-	93	63.702	Esox_lucius
ENSPFOG00000016554	-	54	61.017	ENSFCAG00000006855	SRRT	93	52.375	Felis_catus
ENSPFOG00000016554	-	54	59.348	ENSFDAG00000021347	SRRT	92	52.351	Fukomys_damarensis
ENSPFOG00000016554	-	56	77.801	ENSFHEG00000004105	-	94	76.724	Fundulus_heteroclitus
ENSPFOG00000016554	-	79	64.706	ENSFHEG00000002756	srrt	85	64.461	Fundulus_heteroclitus
ENSPFOG00000016554	-	82	73.718	ENSGMOG00000018694	-	83	66.958	Gadus_morhua
ENSPFOG00000016554	-	95	53.169	ENSGMOG00000018619	srrt	51	62.690	Gadus_morhua
ENSPFOG00000016554	-	100	96.341	ENSGAFG00000020383	-	100	96.341	Gambusia_affinis
ENSPFOG00000016554	-	57	62.195	ENSGACG00000020387	srrt	51	63.871	Gasterosteus_aculeatus
ENSPFOG00000016554	-	93	69.841	ENSGACG00000001100	-	84	80.995	Gasterosteus_aculeatus
ENSPFOG00000016554	-	54	60.981	ENSGGOG00000001508	SRRT	93	52.876	Gorilla_gorilla
ENSPFOG00000016554	-	96	53.341	ENSHGLG00000008344	Srrt	93	52.798	Heterocephalus_glaber_female
ENSPFOG00000016554	-	96	53.901	ENSHGLG00100018857	Srrt	93	53.186	Heterocephalus_glaber_male
ENSPFOG00000016554	-	98	56.590	ENSHCOG00000005403	srrt	92	55.146	Hippocampus_comes
ENSPFOG00000016554	-	93	71.129	ENSHCOG00000008904	-	97	72.306	Hippocampus_comes
ENSPFOG00000016554	-	55	62.661	ENSIPUG00000021150	srrt	51	63.913	Ictalurus_punctatus
ENSPFOG00000016554	-	54	60.981	ENSSTOG00000013776	SRRT	93	52.387	Ictidomys_tridecemlineatus
ENSPFOG00000016554	-	96	54.231	ENSJJAG00000010446	Srrt	89	57.479	Jaculus_jaculus
ENSPFOG00000016554	-	93	76.267	ENSKMAG00000008468	-	93	74.056	Kryptolebias_marmoratus
ENSPFOG00000016554	-	94	56.566	ENSKMAG00000013599	srrt	92	56.091	Kryptolebias_marmoratus
ENSPFOG00000016554	-	64	67.055	ENSLBEG00000028983	-	97	65.539	Labrus_bergylta
ENSPFOG00000016554	-	96	56.145	ENSLBEG00000016308	srrt	92	55.250	Labrus_bergylta
ENSPFOG00000016554	-	94	47.472	ENSLACG00000001089	SRRT	92	47.073	Latimeria_chalumnae
ENSPFOG00000016554	-	74	63.580	ENSLOCG00000013658	srrt	84	54.867	Lepisosteus_oculatus
ENSPFOG00000016554	-	54	60.805	ENSLAFG00000007725	SRRT	93	52.798	Loxodonta_africana
ENSPFOG00000016554	-	54	60.981	ENSMFAG00000033745	SRRT	97	51.870	Macaca_fascicularis
ENSPFOG00000016554	-	54	60.805	ENSMMUG00000021255	SRRT	93	52.497	Macaca_mulatta
ENSPFOG00000016554	-	54	60.805	ENSMNEG00000041864	SRRT	94	51.870	Macaca_nemestrina
ENSPFOG00000016554	-	54	60.981	ENSMLEG00000029479	SRRT	95	51.870	Mandrillus_leucophaeus
ENSPFOG00000016554	-	93	76.427	ENSMAMG00000010681	-	98	76.128	Mastacembelus_armatus
ENSPFOG00000016554	-	54	62.907	ENSMAMG00000014311	srrt	52	63.696	Mastacembelus_armatus
ENSPFOG00000016554	-	93	75.921	ENSMZEG00005028002	-	98	76.263	Maylandia_zebra
ENSPFOG00000016554	-	54	60.593	ENSMAUG00000011386	Srrt	93	53.650	Mesocricetus_auratus
ENSPFOG00000016554	-	54	61.017	ENSMICG00000009471	SRRT	95	52.352	Microcebus_murinus
ENSPFOG00000016554	-	54	60.381	ENSMOCG00000001971	Srrt	93	53.325	Microtus_ochrogaster
ENSPFOG00000016554	-	95	57.265	ENSMMOG00000016399	srrt	92	55.852	Mola_mola
ENSPFOG00000016554	-	82	71.961	ENSMMOG00000011137	-	88	71.547	Mola_mola
ENSPFOG00000016554	-	54	58.281	ENSMODG00000004862	SRRT	89	58.750	Monodelphis_domestica
ENSPFOG00000016554	-	70	55.034	ENSMALG00000005567	-	100	54.392	Monopterus_albus
ENSPFOG00000016554	-	54	61.472	MGP_CAROLIEiJ_G0027870	Srrt	99	56.000	Mus_caroli
ENSPFOG00000016554	-	54	61.472	ENSMUSG00000037364	Srrt	99	56.000	Mus_musculus
ENSPFOG00000016554	-	54	61.472	MGP_PahariEiJ_G0024456	Srrt	99	56.000	Mus_pahari
ENSPFOG00000016554	-	54	61.472	MGP_SPRETEiJ_G0028875	Srrt	99	56.000	Mus_spretus
ENSPFOG00000016554	-	96	53.279	ENSMPUG00000015839	SRRT	93	52.253	Mustela_putorius_furo
ENSPFOG00000016554	-	54	60.381	ENSMLUG00000009975	SRRT	93	52.010	Myotis_lucifugus
ENSPFOG00000016554	-	54	60.381	ENSNGAG00000023715	Srrt	100	54.065	Nannospalax_galili
ENSPFOG00000016554	-	54	62.554	ENSNBRG00000019100	srrt	92	53.137	Neolamprologus_brichardi
ENSPFOG00000016554	-	95	50.240	ENSNLEG00000011987	SRRT	97	50.381	Nomascus_leucogenys
ENSPFOG00000016554	-	94	45.978	ENSMEUG00000011941	SRRT	92	45.356	Notamacropus_eugenii
ENSPFOG00000016554	-	64	59.398	ENSOPRG00000002502	-	67	57.252	Ochotona_princeps
ENSPFOG00000016554	-	54	62.121	ENSODEG00000016856	SRRT	92	54.423	Octodon_degus
ENSPFOG00000016554	-	93	75.735	ENSONIG00000016080	-	93	75.061	Oreochromis_niloticus
ENSPFOG00000016554	-	54	63.067	ENSONIG00000004242	srrt	52	62.076	Oreochromis_niloticus
ENSPFOG00000016554	-	98	76.435	ENSOMEG00000006963	-	98	76.313	Oryzias_melastigma
ENSPFOG00000016554	-	96	56.328	ENSOMEG00000003155	srrt	92	55.470	Oryzias_melastigma
ENSPFOG00000016554	-	54	61.017	ENSOGAG00000017242	SRRT	93	52.497	Otolemur_garnettii
ENSPFOG00000016554	-	54	60.981	ENSOARG00000015645	SRRT	93	52.264	Ovis_aries
ENSPFOG00000016554	-	54	60.981	ENSPPAG00000041090	SRRT	93	52.999	Pan_paniscus
ENSPFOG00000016554	-	54	61.194	ENSPPRG00000009557	SRRT	93	52.574	Panthera_pardus
ENSPFOG00000016554	-	96	53.162	ENSPTIG00000014355	SRRT	93	52.497	Panthera_tigris_altaica
ENSPFOG00000016554	-	54	60.981	ENSPTRG00000019511	SRRT	98	51.146	Pan_troglodytes
ENSPFOG00000016554	-	54	59.583	ENSPANG00000020763	SRRT	96	51.651	Papio_anubis
ENSPFOG00000016554	-	94	55.569	ENSPKIG00000022212	-	93	54.423	Paramormyrops_kingsleyae
ENSPFOG00000016554	-	96	56.574	ENSPKIG00000005434	srrt	92	54.944	Paramormyrops_kingsleyae
ENSPFOG00000016554	-	55	59.275	ENSPSIG00000016311	SRRT	93	52.281	Pelodiscus_sinensis
ENSPFOG00000016554	-	96	55.487	ENSPMGG00000002841	srrt	92	55.696	Periophthalmus_magnuspinnatus
ENSPFOG00000016554	-	54	61.472	ENSPEMG00000010834	Srrt	89	56.838	Peromyscus_maniculatus_bairdii
ENSPFOG00000016554	-	96	50.000	ENSPMAG00000009614	-	55	58.526	Petromyzon_marinus
ENSPFOG00000016554	-	54	60.254	ENSPCIG00000000816	SRRT	93	51.995	Phascolarctos_cinereus
ENSPFOG00000016554	-	100	98.776	ENSPLAG00000004526	-	100	98.776	Poecilia_latipinna
ENSPFOG00000016554	-	97	99.748	ENSPMEG00000001520	-	100	99.748	Poecilia_mexicana
ENSPFOG00000016554	-	80	64.440	ENSPMEG00000001182	srrt	82	64.224	Poecilia_mexicana
ENSPFOG00000016554	-	94	55.967	ENSPREG00000022308	srrt	93	52.530	Poecilia_reticulata
ENSPFOG00000016554	-	54	58.333	ENSPCAG00000001621	SRRT	93	50.422	Procavia_capensis
ENSPFOG00000016554	-	54	61.194	ENSPCOG00000025751	SRRT	93	52.984	Propithecus_coquereli
ENSPFOG00000016554	-	63	59.722	ENSPVAG00000000834	SRRT	79	60.274	Pteropus_vampyrus
ENSPFOG00000016554	-	64	62.500	ENSPNAG00000010629	srrt	65	55.556	Pygocentrus_nattereri
ENSPFOG00000016554	-	54	51.178	ENSRNOG00000048277	AABR07035787.1	92	50.964	Rattus_norvegicus
ENSPFOG00000016554	-	54	60.805	ENSRBIG00000035718	SRRT	94	51.870	Rhinopithecus_bieti
ENSPFOG00000016554	-	54	60.805	ENSRROG00000030622	SRRT	95	51.870	Rhinopithecus_roxellana
ENSPFOG00000016554	-	54	60.981	ENSSBOG00000033570	SRRT	94	52.999	Saimiri_boliviensis_boliviensis
ENSPFOG00000016554	-	71	50.077	ENSSHAG00000007349	-	74	60.632	Sarcophilus_harrisii
ENSPFOG00000016554	-	54	65.510	ENSSFOG00015017293	srrt	51	65.217	Scleropages_formosus
ENSPFOG00000016554	-	94	56.999	ENSSMAG00000015342	srrt	92	56.066	Scophthalmus_maximus
ENSPFOG00000016554	-	81	71.053	ENSSMAG00000018195	-	97	69.623	Scophthalmus_maximus
ENSPFOG00000016554	-	56	65.678	ENSSDUG00000002051	-	94	65.086	Seriola_dumerili
ENSPFOG00000016554	-	54	64.069	ENSSDUG00000012049	srrt	53	63.636	Seriola_dumerili
ENSPFOG00000016554	-	94	53.827	ENSSLDG00000017477	srrt	80	64.114	Seriola_lalandi_dorsalis
ENSPFOG00000016554	-	85	74.366	ENSSPAG00000018943	-	97	74.841	Stegastes_partitus
ENSPFOG00000016554	-	51	61.400	ENSSSCG00000024789	SRRT	98	51.425	Sus_scrofa
ENSPFOG00000016554	-	90	73.670	ENSTRUG00000000023	-	94	73.028	Takifugu_rubripes
ENSPFOG00000016554	-	54	62.260	ENSTRUG00000016075	srrt	93	50.121	Takifugu_rubripes
ENSPFOG00000016554	-	73	52.896	ENSTNIG00000011779	srrt	72	60.842	Tetraodon_nigroviridis
ENSPFOG00000016554	-	93	68.525	ENSTNIG00000003111	-	93	68.642	Tetraodon_nigroviridis
ENSPFOG00000016554	-	54	60.805	ENSTTRG00000011104	SRRT	93	52.132	Tursiops_truncatus
ENSPFOG00000016554	-	54	60.805	ENSUAMG00000027997	SRRT	95	52.253	Ursus_americanus
ENSPFOG00000016554	-	54	60.805	ENSUMAG00000011295	SRRT	93	52.253	Ursus_maritimus
ENSPFOG00000016554	-	96	53.647	ENSVVUG00000023572	SRRT	93	52.132	Vulpes_vulpes
ENSPFOG00000016554	-	96	48.118	ENSXETG00000025124	srrt	96	50.610	Xenopus_tropicalis
ENSPFOG00000016554	-	59	76.240	ENSXCOG00000013105	-	91	79.464	Xiphophorus_couchianus
ENSPFOG00000016554	-	54	65.293	ENSXMAG00000007627	srrt	92	56.122	Xiphophorus_maculatus
ENSPFOG00000016554	-	100	96.715	ENSXMAG00000002090	-	100	96.715	Xiphophorus_maculatus