EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000016767 (Gene tree)
Gene ID: 103149507
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 9416 bases
Position: chrKI519840.1:301406-310821
Accession: 103149507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000023574	RRM_1	PF00076.22	6.4e-41	1	4
ENSPFOP00000023574	RRM_1	PF00076.22	6.4e-41	2	4
ENSPFOP00000023574	RRM_1	PF00076.22	6.4e-41	3	4
ENSPFOP00000023574	RRM_1	PF00076.22	6.4e-41	4	4
ENSPFOP00000016830	RRM_1	PF00076.22	5.2e-40	1	4
ENSPFOP00000016830	RRM_1	PF00076.22	5.2e-40	2	4
ENSPFOP00000016830	RRM_1	PF00076.22	5.2e-40	3	4
ENSPFOP00000016830	RRM_1	PF00076.22	5.2e-40	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000016852	-	2134	-	ENSPFOP00000016830	495 (aa)	XP_007568771	A0A087YFM7
ENSPFOT00000026977	-	2080	-	ENSPFOP00000023574	436 (aa)	-	A0A096LWN3

Gene Model

Click here to download ENSPFOG00000016767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000016767's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000016767	-	87	47.811	ENSACIG00000021941	-	84	48.592	Amphilophus_citrinellus
ENSPFOG00000016767	-	89	47.692	ENSACLG00000009613	-	90	48.767	Astatotilapia_calliptera
ENSPFOG00000016767	-	89	48.515	ENSCSEG00000017388	-	73	49.257	Cynoglossus_semilaevis
ENSPFOG00000016767	-	100	62.424	ENSFHEG00000017265	-	91	63.347	Fundulus_heteroclitus
ENSPFOG00000016767	-	83	41.304	ENSGMOG00000017831	-	99	40.150	Gadus_morhua
ENSPFOG00000016767	-	100	89.091	ENSGAFG00000018408	-	100	89.091	Gambusia_affinis
ENSPFOG00000016767	-	85	47.849	ENSHBUG00000006683	-	91	48.493	Haplochromis_burtoni
ENSPFOG00000016767	-	93	45.972	ENSHCOG00000020361	-	94	46.766	Hippocampus_comes
ENSPFOG00000016767	-	95	57.512	ENSKMAG00000003154	-	87	59.666	Kryptolebias_marmoratus
ENSPFOG00000016767	-	85	48.118	ENSMZEG00005005300	-	91	48.493	Maylandia_zebra
ENSPFOG00000016767	-	86	50.919	ENSMMOG00000018095	-	88	51.213	Mola_mola
ENSPFOG00000016767	-	95	49.451	ENSMALG00000006207	-	86	49.451	Monopterus_albus
ENSPFOG00000016767	-	83	49.589	ENSPMGG00000013705	-	89	50.137	Periophthalmus_magnuspinnatus
ENSPFOG00000016767	-	100	98.182	ENSPLAG00000000597	-	100	98.182	Poecilia_latipinna
ENSPFOG00000016767	-	100	97.778	ENSPMEG00000004046	-	100	97.778	Poecilia_mexicana
ENSPFOG00000016767	-	95	91.737	ENSPREG00000007170	-	92	91.737	Poecilia_reticulata
ENSPFOG00000016767	-	85	48.404	ENSPNYG00000000391	-	91	48.780	Pundamilia_nyererei
ENSPFOG00000016767	-	97	47.856	ENSTRUG00000023880	-	87	49.306	Takifugu_rubripes
ENSPFOG00000016767	-	100	88.687	ENSXMAG00000004403	-	100	88.687	Xiphophorus_maculatus