EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000016768 (Gene tree)
Gene ID: 103147216
Gene Symbol: sf3a1
Alias: -
Full Name: splicing factor 3a%2C subunit 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 5871 bases
Position: chrKI519615.1:5230575-5236445
Accession: ZDB-GENE-030616-156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000016857	PRP21_like_P	PF12230.8	4.3e-53	1	1
ENSPFOP00000016857	Surp	PF01805.20	9.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000016879	-	2633	-	ENSPFOP00000016857	780 (aa)	-	A0A087YFQ4

Gene Model

Click here to download ENSPFOG00000016768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000016768's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000016768	sf3a1	93	79.048	ENSG00000099995	SF3A1	100	75.377	Homo_sapiens
ENSPFOG00000016768	sf3a1	100	84.733	ENSAPOG00000020465	sf3a1	100	84.733	Acanthochromis_polyacanthus
ENSPFOG00000016768	sf3a1	93	78.912	ENSAMEG00000007737	SF3A1	100	74.937	Ailuropoda_melanoleuca
ENSPFOG00000016768	sf3a1	100	84.478	ENSACIG00000020672	sf3a1	100	84.478	Amphilophus_citrinellus
ENSPFOG00000016768	sf3a1	100	84.351	ENSAOCG00000003060	sf3a1	100	84.351	Amphiprion_ocellaris
ENSPFOG00000016768	sf3a1	100	84.478	ENSAPEG00000010735	sf3a1	100	84.478	Amphiprion_percula
ENSPFOG00000016768	sf3a1	93	87.211	ENSATEG00000021201	sf3a1	93	87.211	Anabas_testudineus
ENSPFOG00000016768	sf3a1	93	77.853	ENSAPLG00000009057	SF3A1	95	78.668	Anas_platyrhynchos
ENSPFOG00000016768	sf3a1	100	71.921	ENSACAG00000009415	SF3A1	100	71.921	Anolis_carolinensis
ENSPFOG00000016768	sf3a1	93	78.912	ENSANAG00000032045	SF3A1	100	75.000	Aotus_nancymaae
ENSPFOG00000016768	sf3a1	100	82.930	ENSACLG00000012622	sf3a1	100	84.204	Astatotilapia_calliptera
ENSPFOG00000016768	sf3a1	99	78.344	ENSAMXG00000005382	sf3a1	99	78.344	Astyanax_mexicanus
ENSPFOG00000016768	sf3a1	93	78.912	ENSBTAG00000003390	SF3A1	100	75.251	Bos_taurus
ENSPFOG00000016768	sf3a1	68	45.368	WBGene00004188	prp-21	76	44.656	Caenorhabditis_elegans
ENSPFOG00000016768	sf3a1	93	78.776	ENSCJAG00000010370	SF3A1	100	74.874	Callithrix_jacchus
ENSPFOG00000016768	sf3a1	93	78.912	ENSCAFG00000012559	SF3A1	100	75.251	Canis_familiaris
ENSPFOG00000016768	sf3a1	93	78.912	ENSCAFG00020000838	SF3A1	100	75.251	Canis_lupus_dingo
ENSPFOG00000016768	sf3a1	93	79.048	ENSCHIG00000018642	SF3A1	100	75.377	Capra_hircus
ENSPFOG00000016768	sf3a1	93	79.048	ENSTSYG00000004739	SF3A1	100	75.377	Carlito_syrichta
ENSPFOG00000016768	sf3a1	91	62.729	ENSCAPG00000015414	SF3A1	93	63.291	Cavia_aperea
ENSPFOG00000016768	sf3a1	93	78.776	ENSCPOG00000014589	SF3A1	100	75.126	Cavia_porcellus
ENSPFOG00000016768	sf3a1	93	78.912	ENSCCAG00000032006	SF3A1	100	75.000	Cebus_capucinus
ENSPFOG00000016768	sf3a1	93	79.048	ENSCATG00000029241	SF3A1	100	75.377	Cercocebus_atys
ENSPFOG00000016768	sf3a1	93	78.776	ENSCLAG00000006508	SF3A1	100	75.000	Chinchilla_lanigera
ENSPFOG00000016768	sf3a1	93	79.048	ENSCSAG00000009470	SF3A1	100	75.377	Chlorocebus_sabaeus
ENSPFOG00000016768	sf3a1	54	90.000	ENSCHOG00000005201	SF3A1	61	90.000	Choloepus_hoffmanni
ENSPFOG00000016768	sf3a1	93	76.871	ENSCPBG00000007595	SF3A1	100	73.333	Chrysemys_picta_bellii
ENSPFOG00000016768	sf3a1	93	47.872	ENSCING00000008526	-	93	46.879	Ciona_intestinalis
ENSPFOG00000016768	sf3a1	89	64.035	ENSCSAVG00000005608	-	96	45.710	Ciona_savignyi
ENSPFOG00000016768	sf3a1	93	79.048	ENSCANG00000033564	SF3A1	100	75.377	Colobus_angolensis_palliatus
ENSPFOG00000016768	sf3a1	93	78.231	ENSCGRG00001008933	Sf3a1	100	74.497	Cricetulus_griseus_chok1gshd
ENSPFOG00000016768	sf3a1	93	78.231	ENSCGRG00000006127	Sf3a1	100	74.497	Cricetulus_griseus_crigri
ENSPFOG00000016768	sf3a1	100	80.278	ENSCSEG00000010792	sf3a1	100	80.657	Cynoglossus_semilaevis
ENSPFOG00000016768	sf3a1	100	85.279	ENSCVAG00000004560	sf3a1	100	85.242	Cyprinodon_variegatus
ENSPFOG00000016768	sf3a1	100	77.296	ENSDARG00000041887	sf3a1	100	78.444	Danio_rerio
ENSPFOG00000016768	sf3a1	93	79.212	ENSDNOG00000010629	SF3A1	92	79.348	Dasypus_novemcinctus
ENSPFOG00000016768	sf3a1	93	78.912	ENSDORG00000005613	Sf3a1	100	75.251	Dipodomys_ordii
ENSPFOG00000016768	sf3a1	82	54.545	FBgn0266917	Sf3a1	79	54.464	Drosophila_melanogaster
ENSPFOG00000016768	sf3a1	82	76.791	ENSETEG00000017194	SF3A1	91	77.726	Echinops_telfairi
ENSPFOG00000016768	sf3a1	93	61.757	ENSEBUG00000001285	sf3a1	92	63.377	Eptatretus_burgeri
ENSPFOG00000016768	sf3a1	93	78.912	ENSEASG00005010254	SF3A1	100	75.126	Equus_asinus_asinus
ENSPFOG00000016768	sf3a1	93	78.912	ENSECAG00000023962	SF3A1	100	75.126	Equus_caballus
ENSPFOG00000016768	sf3a1	74	91.803	ENSEEUG00000003159	SF3A1	83	91.803	Erinaceus_europaeus
ENSPFOG00000016768	sf3a1	100	76.806	ENSELUG00000022578	sf3a1	100	77.665	Esox_lucius
ENSPFOG00000016768	sf3a1	93	78.639	ENSFCAG00000011932	SF3A1	100	75.000	Felis_catus
ENSPFOG00000016768	sf3a1	93	76.294	ENSFALG00000006944	SF3A1	100	74.275	Ficedula_albicollis
ENSPFOG00000016768	sf3a1	93	78.776	ENSFDAG00000009560	SF3A1	100	75.126	Fukomys_damarensis
ENSPFOG00000016768	sf3a1	100	86.041	ENSFHEG00000010866	sf3a1	100	86.041	Fundulus_heteroclitus
ENSPFOG00000016768	sf3a1	100	77.284	ENSGMOG00000016024	sf3a1	100	75.849	Gadus_morhua
ENSPFOG00000016768	sf3a1	93	77.959	ENSGALG00000007937	SF3A1	100	74.623	Gallus_gallus
ENSPFOG00000016768	sf3a1	100	87.437	ENSGAFG00000009111	sf3a1	100	87.405	Gambusia_affinis
ENSPFOG00000016768	sf3a1	100	79.061	ENSGACG00000011893	sf3a1	100	79.188	Gasterosteus_aculeatus
ENSPFOG00000016768	sf3a1	89	76.353	ENSGAGG00000000762	SF3A1	99	72.572	Gopherus_agassizii
ENSPFOG00000016768	sf3a1	93	79.048	ENSGGOG00000012631	SF3A1	100	75.377	Gorilla_gorilla
ENSPFOG00000016768	sf3a1	100	84.331	ENSHBUG00000015795	sf3a1	100	84.331	Haplochromis_burtoni
ENSPFOG00000016768	sf3a1	93	78.776	ENSHGLG00000007907	SF3A1	100	75.126	Heterocephalus_glaber_female
ENSPFOG00000016768	sf3a1	93	78.776	ENSHGLG00100013799	SF3A1	100	75.126	Heterocephalus_glaber_male
ENSPFOG00000016768	sf3a1	100	79.468	ENSHCOG00000015423	sf3a1	100	79.543	Hippocampus_comes
ENSPFOG00000016768	sf3a1	93	79.026	ENSIPUG00000002470	sf3a1	94	79.432	Ictalurus_punctatus
ENSPFOG00000016768	sf3a1	93	78.776	ENSSTOG00000013892	SF3A1	100	75.094	Ictidomys_tridecemlineatus
ENSPFOG00000016768	sf3a1	93	78.776	ENSJJAG00000022566	Sf3a1	100	75.031	Jaculus_jaculus
ENSPFOG00000016768	sf3a1	100	83.079	ENSKMAG00000002400	sf3a1	100	83.079	Kryptolebias_marmoratus
ENSPFOG00000016768	sf3a1	100	81.980	ENSLBEG00000022974	sf3a1	100	82.061	Labrus_bergylta
ENSPFOG00000016768	sf3a1	100	74.365	ENSLACG00000003565	SF3A1	100	74.746	Latimeria_chalumnae
ENSPFOG00000016768	sf3a1	100	77.722	ENSLOCG00000008251	sf3a1	99	77.595	Lepisosteus_oculatus
ENSPFOG00000016768	sf3a1	96	52.387	ENSLAFG00000026032	-	93	51.312	Loxodonta_africana
ENSPFOG00000016768	sf3a1	93	79.184	ENSLAFG00000000448	SF3A1	100	75.503	Loxodonta_africana
ENSPFOG00000016768	sf3a1	93	78.912	ENSMFAG00000031979	SF3A1	100	75.251	Macaca_fascicularis
ENSPFOG00000016768	sf3a1	93	78.912	ENSMMUG00000005547	SF3A1	100	75.251	Macaca_mulatta
ENSPFOG00000016768	sf3a1	93	79.048	ENSMNEG00000037229	SF3A1	100	75.377	Macaca_nemestrina
ENSPFOG00000016768	sf3a1	93	79.048	ENSMLEG00000041908	SF3A1	100	75.377	Mandrillus_leucophaeus
ENSPFOG00000016768	sf3a1	93	86.803	ENSMAMG00000006460	sf3a1	92	86.803	Mastacembelus_armatus
ENSPFOG00000016768	sf3a1	100	82.930	ENSMZEG00005009633	sf3a1	100	84.204	Maylandia_zebra
ENSPFOG00000016768	sf3a1	93	77.959	ENSMGAG00000001330	SF3A1	95	78.455	Meleagris_gallopavo
ENSPFOG00000016768	sf3a1	100	70.544	ENSMAUG00000020317	Sf3a1	100	71.681	Mesocricetus_auratus
ENSPFOG00000016768	sf3a1	93	79.048	ENSMICG00000010038	SF3A1	100	75.377	Microcebus_murinus
ENSPFOG00000016768	sf3a1	93	78.367	ENSMOCG00000008438	Sf3a1	100	74.749	Microtus_ochrogaster
ENSPFOG00000016768	sf3a1	100	80.946	ENSMMOG00000015588	sf3a1	99	80.946	Mola_mola
ENSPFOG00000016768	sf3a1	93	77.687	ENSMODG00000009270	SF3A1	100	74.340	Monodelphis_domestica
ENSPFOG00000016768	sf3a1	100	83.249	ENSMALG00000000148	sf3a1	99	87.176	Monopterus_albus
ENSPFOG00000016768	sf3a1	93	78.231	MGP_CAROLIEiJ_G0016029	Sf3a1	92	78.912	Mus_caroli
ENSPFOG00000016768	sf3a1	93	78.231	ENSMUSG00000002129	Sf3a1	92	78.912	Mus_musculus
ENSPFOG00000016768	sf3a1	93	78.095	MGP_PahariEiJ_G0016862	Sf3a1	92	78.912	Mus_pahari
ENSPFOG00000016768	sf3a1	93	78.231	MGP_SPRETEiJ_G0016870	Sf3a1	92	78.912	Mus_spretus
ENSPFOG00000016768	sf3a1	93	78.639	ENSMPUG00000013144	SF3A1	100	75.377	Mustela_putorius_furo
ENSPFOG00000016768	sf3a1	93	78.776	ENSMLUG00000002139	SF3A1	100	75.126	Myotis_lucifugus
ENSPFOG00000016768	sf3a1	93	78.776	ENSNGAG00000016977	Sf3a1	100	75.000	Nannospalax_galili
ENSPFOG00000016768	sf3a1	100	84.391	ENSNBRG00000016642	sf3a1	100	84.391	Neolamprologus_brichardi
ENSPFOG00000016768	sf3a1	93	79.048	ENSNLEG00000003686	SF3A1	100	75.377	Nomascus_leucogenys
ENSPFOG00000016768	sf3a1	89	68.946	ENSMEUG00000008741	SF3A1	100	65.966	Notamacropus_eugenii
ENSPFOG00000016768	sf3a1	93	79.184	ENSOPRG00000016636	SF3A1	100	75.503	Ochotona_princeps
ENSPFOG00000016768	sf3a1	93	78.776	ENSODEG00000002571	SF3A1	100	74.969	Octodon_degus
ENSPFOG00000016768	sf3a1	100	84.586	ENSONIG00000010848	sf3a1	100	84.586	Oreochromis_niloticus
ENSPFOG00000016768	sf3a1	93	78.912	ENSOCUG00000007633	SF3A1	100	75.251	Oryctolagus_cuniculus
ENSPFOG00000016768	sf3a1	96	83.112	ENSORLG00000013050	sf3a1	99	83.112	Oryzias_latipes
ENSPFOG00000016768	sf3a1	99	81.266	ENSORLG00020003236	sf3a1	97	81.266	Oryzias_latipes_hni
ENSPFOG00000016768	sf3a1	100	83.057	ENSORLG00015017411	sf3a1	100	83.057	Oryzias_latipes_hsok
ENSPFOG00000016768	sf3a1	100	83.822	ENSOMEG00000013362	sf3a1	100	83.694	Oryzias_melastigma
ENSPFOG00000016768	sf3a1	93	79.048	ENSOGAG00000012931	SF3A1	100	75.377	Otolemur_garnettii
ENSPFOG00000016768	sf3a1	93	77.551	ENSOARG00000006849	SF3A1	100	73.995	Ovis_aries
ENSPFOG00000016768	sf3a1	93	78.231	ENSPPAG00000041790	SF3A1	100	74.497	Pan_paniscus
ENSPFOG00000016768	sf3a1	93	78.639	ENSPPRG00000004391	SF3A1	100	75.000	Panthera_pardus
ENSPFOG00000016768	sf3a1	93	78.503	ENSPTIG00000000844	SF3A1	95	79.048	Panthera_tigris_altaica
ENSPFOG00000016768	sf3a1	93	79.048	ENSPTRG00000014240	SF3A1	100	75.377	Pan_troglodytes
ENSPFOG00000016768	sf3a1	93	79.048	ENSPANG00000020772	SF3A1	100	75.377	Papio_anubis
ENSPFOG00000016768	sf3a1	78	91.209	ENSPSIG00000012803	SF3A1	94	91.209	Pelodiscus_sinensis
ENSPFOG00000016768	sf3a1	95	81.267	ENSPMGG00000023096	sf3a1	97	82.999	Periophthalmus_magnuspinnatus
ENSPFOG00000016768	sf3a1	93	78.367	ENSPEMG00000009494	Sf3a1	100	74.623	Peromyscus_maniculatus_bairdii
ENSPFOG00000016768	sf3a1	62	73.511	ENSPMAG00000007139	-	83	73.511	Petromyzon_marinus
ENSPFOG00000016768	sf3a1	93	78.367	ENSPCIG00000022692	SF3A1	100	74.559	Phascolarctos_cinereus
ENSPFOG00000016768	sf3a1	100	88.832	ENSPLAG00000017268	sf3a1	100	88.832	Poecilia_latipinna
ENSPFOG00000016768	sf3a1	85	99.096	ENSPMEG00000019811	sf3a1	98	99.096	Poecilia_mexicana
ENSPFOG00000016768	sf3a1	100	87.944	ENSPREG00000010347	sf3a1	100	87.944	Poecilia_reticulata
ENSPFOG00000016768	sf3a1	93	79.048	ENSPPYG00000011707	SF3A1	100	75.377	Pongo_abelii
ENSPFOG00000016768	sf3a1	58	83.884	ENSPCAG00000003266	SF3A1	57	83.884	Procavia_capensis
ENSPFOG00000016768	sf3a1	93	78.776	ENSPCOG00000026630	SF3A1	100	75.126	Propithecus_coquereli
ENSPFOG00000016768	sf3a1	93	77.823	ENSPVAG00000017719	SF3A1	92	78.367	Pteropus_vampyrus
ENSPFOG00000016768	sf3a1	100	84.204	ENSPNYG00000018706	sf3a1	100	84.204	Pundamilia_nyererei
ENSPFOG00000016768	sf3a1	99	77.962	ENSPNAG00000003721	sf3a1	99	77.962	Pygocentrus_nattereri
ENSPFOG00000016768	sf3a1	93	78.095	ENSRNOG00000005218	Sf3a1	99	74.495	Rattus_norvegicus
ENSPFOG00000016768	sf3a1	93	78.912	ENSRBIG00000032167	SF3A1	100	75.251	Rhinopithecus_bieti
ENSPFOG00000016768	sf3a1	93	78.912	ENSRROG00000044908	SF3A1	100	75.251	Rhinopithecus_roxellana
ENSPFOG00000016768	sf3a1	93	78.990	ENSSBOG00000021960	SF3A1	99	85.052	Saimiri_boliviensis_boliviensis
ENSPFOG00000016768	sf3a1	93	74.422	ENSSHAG00000003666	SF3A1	93	76.054	Sarcophilus_harrisii
ENSPFOG00000016768	sf3a1	100	80.152	ENSSFOG00015004579	sf3a1	100	80.657	Scleropages_formosus
ENSPFOG00000016768	sf3a1	100	80.204	ENSSMAG00000004275	sf3a1	100	80.587	Scophthalmus_maximus
ENSPFOG00000016768	sf3a1	100	83.629	ENSSDUG00000022219	sf3a1	100	83.629	Seriola_dumerili
ENSPFOG00000016768	sf3a1	100	83.629	ENSSLDG00000012642	sf3a1	100	83.629	Seriola_lalandi_dorsalis
ENSPFOG00000016768	sf3a1	93	75.646	ENSSARG00000005960	SF3A1	95	76.190	Sorex_araneus
ENSPFOG00000016768	sf3a1	93	76.644	ENSSPUG00000018863	SF3A1	100	74.439	Sphenodon_punctatus
ENSPFOG00000016768	sf3a1	100	84.331	ENSSPAG00000011856	sf3a1	100	84.331	Stegastes_partitus
ENSPFOG00000016768	sf3a1	93	78.639	ENSSSCG00000010002	SF3A1	100	75.251	Sus_scrofa
ENSPFOG00000016768	sf3a1	93	77.748	ENSTGUG00000010547	SF3A1	95	78.562	Taeniopygia_guttata
ENSPFOG00000016768	sf3a1	100	78.981	ENSTRUG00000006118	sf3a1	100	79.055	Takifugu_rubripes
ENSPFOG00000016768	sf3a1	59	86.900	ENSTNIG00000005713	sf3a1	89	89.381	Tetraodon_nigroviridis
ENSPFOG00000016768	sf3a1	93	72.109	ENSTBEG00000012771	SF3A1	100	68.970	Tupaia_belangeri
ENSPFOG00000016768	sf3a1	93	78.940	ENSTTRG00000001535	SF3A1	100	75.282	Tursiops_truncatus
ENSPFOG00000016768	sf3a1	99	73.418	ENSUAMG00000006750	SF3A1	99	74.177	Ursus_americanus
ENSPFOG00000016768	sf3a1	93	79.070	ENSUMAG00000016665	SF3A1	98	81.764	Ursus_maritimus
ENSPFOG00000016768	sf3a1	93	78.912	ENSVVUG00000003075	SF3A1	100	75.251	Vulpes_vulpes
ENSPFOG00000016768	sf3a1	93	73.978	ENSXETG00000016144	sf3a1	100	70.226	Xenopus_tropicalis
ENSPFOG00000016768	sf3a1	100	87.183	ENSXCOG00000015653	sf3a1	100	87.150	Xiphophorus_couchianus
ENSPFOG00000016768	sf3a1	100	87.183	ENSXMAG00000002753	sf3a1	100	87.150	Xiphophorus_maculatus