EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000016884 (Gene tree)
Gene ID: 103138308
Gene Symbol: si:dkey-31m14.7
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 47207 bases
Position: chrKI519658.1:2138071-2185277
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000016975	RIO1	PF01163.22	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000016997	-	2163	-	ENSPFOP00000016975	706 (aa)	-	A0A087YG22

Gene Model

Click here to download ENSPFOG00000016884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000016884's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000016884	si:dkey-31m14.7	71	69.505	ENSPFOG00000019488	MARK3	99	69.307
ENSPFOG00000016884	si:dkey-31m14.7	92	56.170	ENSPFOG00000005142	MARK1	86	55.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000016884	si:dkey-31m14.7	87	87.785	ENSAOCG00000003969	si:dkey-31m14.7	83	88.274	Amphiprion_ocellaris
ENSPFOG00000016884	si:dkey-31m14.7	86	87.889	ENSAPEG00000016512	si:dkey-31m14.7	84	88.380	Amphiprion_percula
ENSPFOG00000016884	si:dkey-31m14.7	93	96.212	ENSCVAG00000014469	si:dkey-31m14.7	95	96.212	Cyprinodon_variegatus
ENSPFOG00000016884	si:dkey-31m14.7	93	69.871	ENSECAG00000000359	MARK4	86	69.010	Equus_caballus
ENSPFOG00000016884	si:dkey-31m14.7	93	89.577	ENSKMAG00000021234	si:dkey-31m14.7	95	90.483	Kryptolebias_marmoratus
ENSPFOG00000016884	si:dkey-31m14.7	93	88.218	ENSMALG00000005674	si:dkey-31m14.7	90	89.124	Monopterus_albus
ENSPFOG00000016884	si:dkey-31m14.7	93	89.107	ENSOMEG00000023266	si:dkey-31m14.7	93	89.259	Oryzias_melastigma
ENSPFOG00000016884	si:dkey-31m14.7	90	72.627	ENSPMGG00000010182	-	74	89.489	Periophthalmus_magnuspinnatus
ENSPFOG00000016884	si:dkey-31m14.7	92	97.397	ENSPLAG00000023464	si:dkey-31m14.7	86	97.397	Poecilia_latipinna
ENSPFOG00000016884	si:dkey-31m14.7	89	92.247	ENSPREG00000019203	si:dkey-31m14.7	83	93.038	Poecilia_reticulata
ENSPFOG00000016884	si:dkey-31m14.7	100	97.313	ENSXMAG00000005903	si:dkey-31m14.7	100	97.313	Xiphophorus_maculatus