EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000017101 (Gene tree)
Gene ID: 103130906
Gene Symbol: -
Alias: -
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 7323 bases
Position: chrKI520301.1:133274-140596
Accession: 103130906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000017169	PC4	PF02229.16	2.6e-26	1	1
ENSPFOP00000025275	PC4	PF02229.16	2.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000025055	-	2886	-	ENSPFOP00000025275	122 (aa)	-	A0A096M1I4
ENSPFOT00000017191	-	2889	-	ENSPFOP00000017169	124 (aa)	XP_007542493	A0A087YGL6

Gene Model

Click here to download ENSPFOG00000017101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000017101's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000017101	-	99	80.000	ENSAMXG00000038560	-	100	78.571	Astyanax_mexicanus
ENSPFOG00000017101	-	100	53.175	ENSCPBG00000010898	-	100	53.175	Chrysemys_picta_bellii
ENSPFOG00000017101	-	100	45.455	ENSCING00000017560	-	52	51.562	Ciona_intestinalis
ENSPFOG00000017101	-	100	84.000	ENSCSEG00000011154	-	100	80.000	Cynoglossus_semilaevis
ENSPFOG00000017101	-	100	86.400	ENSCSEG00000009205	-	100	82.400	Cynoglossus_semilaevis
ENSPFOG00000017101	-	100	95.200	ENSCVAG00000021573	-	73	90.400	Cyprinodon_variegatus
ENSPFOG00000017101	-	55	82.090	ENSDORG00000026076	-	100	64.000	Dipodomys_ordii
ENSPFOG00000017101	-	71	40.449	FBgn0015299	Ssb-c31a	50	41.071	Drosophila_melanogaster
ENSPFOG00000017101	-	100	78.295	ENSELUG00000022688	sub1	100	75.194	Esox_lucius
ENSPFOG00000017101	-	100	75.385	ENSELUG00000005136	TCP4	100	69.231	Esox_lucius
ENSPFOG00000017101	-	100	81.600	ENSGMOG00000011659	-	100	80.800	Gadus_morhua
ENSPFOG00000017101	-	100	100.000	ENSGAFG00000016251	-	100	100.000	Gambusia_affinis
ENSPFOG00000017101	-	100	91.200	ENSKMAG00000013670	-	100	89.600	Kryptolebias_marmoratus
ENSPFOG00000017101	-	99	87.805	ENSMMOG00000008698	-	100	87.097	Mola_mola
ENSPFOG00000017101	-	76	74.737	ENSNGAG00000001935	-	69	71.579	Nannospalax_galili
ENSPFOG00000017101	-	100	63.780	ENSODEG00000004776	-	100	62.698	Octodon_degus
ENSPFOG00000017101	-	100	92.000	ENSONIG00000013958	-	100	91.200	Oreochromis_niloticus
ENSPFOG00000017101	-	99	87.903	ENSORLG00000017237	sub1	100	87.200	Oryzias_latipes
ENSPFOG00000017101	-	99	87.903	ENSORLG00020014865	sub1	100	87.200	Oryzias_latipes_hni
ENSPFOG00000017101	-	99	87.903	ENSORLG00015005820	sub1	100	87.200	Oryzias_latipes_hsok
ENSPFOG00000017101	-	99	87.903	ENSOMEG00000003351	-	100	87.200	Oryzias_melastigma
ENSPFOG00000017101	-	99	85.714	ENSPMGG00000017654	-	100	78.740	Periophthalmus_magnuspinnatus
ENSPFOG00000017101	-	100	100.000	ENSPLAG00000015088	-	100	100.000	Poecilia_latipinna
ENSPFOG00000017101	-	100	100.000	ENSPMEG00000023692	-	100	100.000	Poecilia_mexicana
ENSPFOG00000017101	-	100	100.000	ENSPREG00000011918	-	100	100.000	Poecilia_reticulata
ENSPFOG00000017101	-	100	99.194	ENSXCOG00000009356	-	100	99.194	Xiphophorus_couchianus
ENSPFOG00000017101	-	100	99.194	ENSXMAG00000013353	-	100	99.194	Xiphophorus_maculatus