EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000017118 (Gene tree)
Gene ID: 103154033
Gene Symbol: UPF2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 25928 bases
Position: chrKI519981.1:214552-240479
Accession: 103154033
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000017240	Upf2	PF04050.14	1.2e-32	1	1
ENSPFOP00000017240	MIF4G	PF02854.19	5.8e-80	1	3
ENSPFOP00000017240	MIF4G	PF02854.19	5.8e-80	2	3
ENSPFOP00000017240	MIF4G	PF02854.19	5.8e-80	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000017262	UPF2-201	8231	-	ENSPFOP00000017240	1275 (aa)	XP_007575236	A0A087YGT7

Gene Model

Click here to download ENSPFOG00000017118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000017118's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000017118	UPF2	100	81.917	ENSG00000151461	UPF2	100	79.891	Homo_sapiens
ENSPFOG00000017118	UPF2	99	88.540	ENSAPOG00000015837	UPF2	100	88.185	Acanthochromis_polyacanthus
ENSPFOG00000017118	UPF2	100	82.371	ENSAMEG00000004586	UPF2	100	80.187	Ailuropoda_melanoleuca
ENSPFOG00000017118	UPF2	99	93.652	ENSACIG00000018078	UPF2	100	94.044	Amphilophus_citrinellus
ENSPFOG00000017118	UPF2	100	94.592	ENSAOCG00000016766	UPF2	100	94.592	Amphiprion_ocellaris
ENSPFOG00000017118	UPF2	100	94.671	ENSAPEG00000019084	UPF2	100	94.671	Amphiprion_percula
ENSPFOG00000017118	UPF2	100	93.505	ENSATEG00000021677	UPF2	99	93.897	Anabas_testudineus
ENSPFOG00000017118	UPF2	100	78.460	ENSAPLG00000010287	UPF2	90	83.046	Anas_platyrhynchos
ENSPFOG00000017118	UPF2	100	82.293	ENSACAG00000009259	UPF2	100	82.605	Anolis_carolinensis
ENSPFOG00000017118	UPF2	91	78.694	ENSANAG00000028451	UPF2	93	79.074	Aotus_nancymaae
ENSPFOG00000017118	UPF2	100	93.505	ENSACLG00000012696	UPF2	100	93.897	Astatotilapia_calliptera
ENSPFOG00000017118	UPF2	99	88.507	ENSAMXG00000013700	UPF2	99	86.161	Astyanax_mexicanus
ENSPFOG00000017118	UPF2	100	82.215	ENSBTAG00000000288	UPF2	100	80.187	Bos_taurus
ENSPFOG00000017118	UPF2	100	81.747	ENSCJAG00000020685	UPF2	100	79.953	Callithrix_jacchus
ENSPFOG00000017118	UPF2	100	82.371	ENSCAFG00000004839	UPF2	100	80.187	Canis_familiaris
ENSPFOG00000017118	UPF2	95	86.364	ENSCAFG00020005882	UPF2	98	80.039	Canis_lupus_dingo
ENSPFOG00000017118	UPF2	100	82.371	ENSCHIG00000020359	UPF2	100	80.187	Capra_hircus
ENSPFOG00000017118	UPF2	100	82.059	ENSTSYG00000000935	UPF2	97	85.000	Carlito_syrichta
ENSPFOG00000017118	UPF2	91	74.166	ENSCAPG00000016658	UPF2	95	74.274	Cavia_aperea
ENSPFOG00000017118	UPF2	99	79.167	ENSCPOG00000008809	UPF2	92	82.935	Cavia_porcellus
ENSPFOG00000017118	UPF2	100	75.741	ENSCCAG00000035991	UPF2	100	73.947	Cebus_capucinus
ENSPFOG00000017118	UPF2	100	81.917	ENSCATG00000032679	UPF2	100	79.891	Cercocebus_atys
ENSPFOG00000017118	UPF2	100	81.187	ENSCLAG00000011434	UPF2	100	80.328	Chinchilla_lanigera
ENSPFOG00000017118	UPF2	100	81.917	ENSCSAG00000013372	UPF2	100	79.891	Chlorocebus_sabaeus
ENSPFOG00000017118	UPF2	79	89.333	ENSCHOG00000000422	UPF2	83	89.333	Choloepus_hoffmanni
ENSPFOG00000017118	UPF2	99	80.986	ENSCPBG00000027823	UPF2	100	81.142	Chrysemys_picta_bellii
ENSPFOG00000017118	UPF2	79	49.066	ENSCSAVG00000007772	-	99	47.839	Ciona_savignyi
ENSPFOG00000017118	UPF2	99	76.762	ENSCANG00000040396	UPF2	100	75.039	Colobus_angolensis_palliatus
ENSPFOG00000017118	UPF2	100	81.655	ENSCGRG00001019347	Upf2	100	79.469	Cricetulus_griseus_chok1gshd
ENSPFOG00000017118	UPF2	100	81.655	ENSCGRG00000017993	Upf2	100	79.469	Cricetulus_griseus_crigri
ENSPFOG00000017118	UPF2	99	85.456	ENSCSEG00000003520	UPF2	99	84.875	Cynoglossus_semilaevis
ENSPFOG00000017118	UPF2	99	96.524	ENSCVAG00000006167	UPF2	100	96.524	Cyprinodon_variegatus
ENSPFOG00000017118	UPF2	100	82.137	ENSDNOG00000018160	UPF2	100	80.187	Dasypus_novemcinctus
ENSPFOG00000017118	UPF2	100	81.591	ENSDORG00000002478	Upf2	100	79.485	Dipodomys_ordii
ENSPFOG00000017118	UPF2	89	35.650	FBgn0029992	Upf2	73	39.274	Drosophila_melanogaster
ENSPFOG00000017118	UPF2	73	92.701	ENSETEG00000011583	-	62	92.647	Echinops_telfairi
ENSPFOG00000017118	UPF2	64	71.523	ENSEBUG00000012448	-	93	69.012	Eptatretus_burgeri
ENSPFOG00000017118	UPF2	100	81.187	ENSEASG00005019274	UPF2	100	80.406	Equus_asinus_asinus
ENSPFOG00000017118	UPF2	100	81.187	ENSECAG00000017022	UPF2	100	80.406	Equus_caballus
ENSPFOG00000017118	UPF2	82	74.214	ENSEEUG00000007819	UPF2	69	84.772	Erinaceus_europaeus
ENSPFOG00000017118	UPF2	99	87.666	ENSELUG00000012014	UPF2	100	87.207	Esox_lucius
ENSPFOG00000017118	UPF2	100	85.246	ENSFCAG00000005785	UPF2	100	80.265	Felis_catus
ENSPFOG00000017118	UPF2	100	83.307	ENSFALG00000001889	UPF2	98	83.463	Ficedula_albicollis
ENSPFOG00000017118	UPF2	100	80.718	ENSFDAG00000014348	UPF2	100	79.938	Fukomys_damarensis
ENSPFOG00000017118	UPF2	99	96.759	ENSFHEG00000009826	UPF2	100	96.759	Fundulus_heteroclitus
ENSPFOG00000017118	UPF2	99	86.271	ENSGMOG00000005557	UPF2	100	86.193	Gadus_morhua
ENSPFOG00000017118	UPF2	100	83.242	ENSGALG00000033772	UPF2	100	82.931	Gallus_gallus
ENSPFOG00000017118	UPF2	100	98.431	ENSGAFG00000020867	UPF2	100	98.431	Gambusia_affinis
ENSPFOG00000017118	UPF2	99	90.461	ENSGACG00000001080	UPF2	100	90.618	Gasterosteus_aculeatus
ENSPFOG00000017118	UPF2	100	82.059	ENSGAGG00000002700	UPF2	100	82.293	Gopherus_agassizii
ENSPFOG00000017118	UPF2	100	81.917	ENSGGOG00000001479	UPF2	100	79.891	Gorilla_gorilla
ENSPFOG00000017118	UPF2	100	93.349	ENSHBUG00000004249	UPF2	100	93.887	Haplochromis_burtoni
ENSPFOG00000017118	UPF2	100	80.796	ENSHGLG00000015176	-	100	79.938	Heterocephalus_glaber_female
ENSPFOG00000017118	UPF2	99	72.166	ENSHGLG00000003822	-	99	72.400	Heterocephalus_glaber_female
ENSPFOG00000017118	UPF2	99	78.655	ENSHGLG00100010036	UPF2	95	80.992	Heterocephalus_glaber_male
ENSPFOG00000017118	UPF2	100	89.774	ENSHCOG00000004025	UPF2	99	89.774	Hippocampus_comes
ENSPFOG00000017118	UPF2	100	87.510	ENSIPUG00000015524	UPF2	100	87.198	Ictalurus_punctatus
ENSPFOG00000017118	UPF2	100	82.137	ENSSTOG00000013075	UPF2	100	79.907	Ictidomys_tridecemlineatus
ENSPFOG00000017118	UPF2	100	78.689	ENSJJAG00000004913	Upf2	100	79.034	Jaculus_jaculus
ENSPFOG00000017118	UPF2	99	93.375	ENSKMAG00000001071	UPF2	100	93.454	Kryptolebias_marmoratus
ENSPFOG00000017118	UPF2	80	89.226	ENSLBEG00000000728	-	94	89.659	Labrus_bergylta
ENSPFOG00000017118	UPF2	100	92.097	ENSLBEG00000016394	-	99	92.879	Labrus_bergylta
ENSPFOG00000017118	UPF2	99	75.857	ENSLACG00000015945	UPF2	99	76.090	Latimeria_chalumnae
ENSPFOG00000017118	UPF2	99	87.717	ENSLOCG00000015698	UPF2	100	87.323	Lepisosteus_oculatus
ENSPFOG00000017118	UPF2	100	81.917	ENSMFAG00000043865	UPF2	100	79.891	Macaca_fascicularis
ENSPFOG00000017118	UPF2	100	81.917	ENSMMUG00000008241	UPF2	100	79.891	Macaca_mulatta
ENSPFOG00000017118	UPF2	80	82.456	ENSMNEG00000008062	UPF2	99	79.435	Macaca_nemestrina
ENSPFOG00000017118	UPF2	99	79.875	ENSMLEG00000036120	UPF2	100	77.752	Mandrillus_leucophaeus
ENSPFOG00000017118	UPF2	100	91.628	ENSMAMG00000018276	UPF2	100	93.662	Mastacembelus_armatus
ENSPFOG00000017118	UPF2	100	93.505	ENSMZEG00005021595	UPF2	100	93.897	Maylandia_zebra
ENSPFOG00000017118	UPF2	99	82.694	ENSMGAG00000004573	UPF2	99	82.381	Meleagris_gallopavo
ENSPFOG00000017118	UPF2	100	79.625	ENSMAUG00000016512	Upf2	100	77.440	Mesocricetus_auratus
ENSPFOG00000017118	UPF2	99	79.688	ENSMICG00000001716	UPF2	100	76.989	Microcebus_murinus
ENSPFOG00000017118	UPF2	100	80.625	ENSMOCG00000008263	Upf2	100	79.766	Microtus_ochrogaster
ENSPFOG00000017118	UPF2	99	88.619	ENSMMOG00000006528	UPF2	100	88.697	Mola_mola
ENSPFOG00000017118	UPF2	100	80.187	ENSMODG00000016794	UPF2	92	85.324	Monodelphis_domestica
ENSPFOG00000017118	UPF2	99	92.308	ENSMALG00000002663	UPF2	100	92.386	Monopterus_albus
ENSPFOG00000017118	UPF2	100	81.421	MGP_CAROLIEiJ_G0023157	Upf2	99	84.435	Mus_caroli
ENSPFOG00000017118	UPF2	100	81.577	ENSMUSG00000043241	Upf2	99	83.585	Mus_musculus
ENSPFOG00000017118	UPF2	100	81.811	MGP_PahariEiJ_G0019217	Upf2	100	83.396	Mus_pahari
ENSPFOG00000017118	UPF2	100	81.811	MGP_SPRETEiJ_G0024075	Upf2	100	83.585	Mus_spretus
ENSPFOG00000017118	UPF2	100	82.293	ENSMPUG00000001064	UPF2	100	80.265	Mustela_putorius_furo
ENSPFOG00000017118	UPF2	99	81.279	ENSMLUG00000000228	UPF2	100	79.283	Myotis_lucifugus
ENSPFOG00000017118	UPF2	100	93.505	ENSNBRG00000013629	UPF2	100	93.897	Neolamprologus_brichardi
ENSPFOG00000017118	UPF2	100	81.839	ENSNLEG00000012058	UPF2	100	79.813	Nomascus_leucogenys
ENSPFOG00000017118	UPF2	72	93.662	ENSOPRG00000006801	-	73	93.662	Ochotona_princeps
ENSPFOG00000017118	UPF2	100	80.796	ENSODEG00000001290	UPF2	100	80.016	Octodon_degus
ENSPFOG00000017118	UPF2	100	93.114	ENSONIG00000017991	UPF2	100	93.505	Oreochromis_niloticus
ENSPFOG00000017118	UPF2	99	79.689	ENSOCUG00000006230	UPF2	92	84.877	Oryctolagus_cuniculus
ENSPFOG00000017118	UPF2	100	91.778	ENSORLG00000017189	UPF2	100	92.013	Oryzias_latipes
ENSPFOG00000017118	UPF2	100	91.856	ENSORLG00020005969	UPF2	100	92.091	Oryzias_latipes_hni
ENSPFOG00000017118	UPF2	100	91.856	ENSORLG00015005713	UPF2	100	92.091	Oryzias_latipes_hsok
ENSPFOG00000017118	UPF2	99	88.697	ENSOMEG00000023420	UPF2	98	88.540	Oryzias_melastigma
ENSPFOG00000017118	UPF2	100	82.059	ENSOGAG00000005796	UPF2	100	79.641	Otolemur_garnettii
ENSPFOG00000017118	UPF2	100	82.243	ENSOARG00000014587	UPF2	100	80.062	Ovis_aries
ENSPFOG00000017118	UPF2	99	79.407	ENSPPAG00000037953	UPF2	100	77.241	Pan_paniscus
ENSPFOG00000017118	UPF2	100	82.449	ENSPPRG00000000690	UPF2	100	80.265	Panthera_pardus
ENSPFOG00000017118	UPF2	100	82.449	ENSPTIG00000008867	UPF2	100	80.265	Panthera_tigris_altaica
ENSPFOG00000017118	UPF2	100	81.917	ENSPTRG00000002291	UPF2	100	79.891	Pan_troglodytes
ENSPFOG00000017118	UPF2	100	81.917	ENSPANG00000023399	UPF2	100	79.891	Papio_anubis
ENSPFOG00000017118	UPF2	100	87.578	ENSPKIG00000025502	UPF2	100	86.172	Paramormyrops_kingsleyae
ENSPFOG00000017118	UPF2	59	81.291	ENSPSIG00000015158	UPF2	95	80.764	Pelodiscus_sinensis
ENSPFOG00000017118	UPF2	99	88.845	ENSPMGG00000005259	UPF2	100	88.610	Periophthalmus_magnuspinnatus
ENSPFOG00000017118	UPF2	93	74.063	ENSPEMG00000015731	Upf2	90	82.700	Peromyscus_maniculatus_bairdii
ENSPFOG00000017118	UPF2	100	82.137	ENSPCIG00000006656	UPF2	100	80.187	Phascolarctos_cinereus
ENSPFOG00000017118	UPF2	100	99.922	ENSPLAG00000005094	UPF2	100	99.922	Poecilia_latipinna
ENSPFOG00000017118	UPF2	100	99.686	ENSPMEG00000017009	UPF2	100	99.686	Poecilia_mexicana
ENSPFOG00000017118	UPF2	99	97.958	ENSPREG00000021880	UPF2	100	97.958	Poecilia_reticulata
ENSPFOG00000017118	UPF2	66	84.698	ENSPPYG00000002089	-	100	85.291	Pongo_abelii
ENSPFOG00000017118	UPF2	100	69.782	ENSPCAG00000000684	UPF2	86	75.547	Procavia_capensis
ENSPFOG00000017118	UPF2	99	79.141	ENSPCOG00000021656	UPF2	100	77.535	Propithecus_coquereli
ENSPFOG00000017118	UPF2	100	75.760	ENSPVAG00000017286	UPF2	100	73.655	Pteropus_vampyrus
ENSPFOG00000017118	UPF2	99	90.909	ENSPNYG00000017096	UPF2	100	91.301	Pundamilia_nyererei
ENSPFOG00000017118	UPF2	100	89.071	ENSPNAG00000009357	UPF2	100	88.915	Pygocentrus_nattereri
ENSPFOG00000017118	UPF2	99	77.494	ENSRNOG00000023593	Upf2	100	93.333	Rattus_norvegicus
ENSPFOG00000017118	UPF2	99	80.703	ENSRBIG00000037780	UPF2	100	78.499	Rhinopithecus_bieti
ENSPFOG00000017118	UPF2	100	81.684	ENSRROG00000043547	UPF2	100	79.579	Rhinopithecus_roxellana
ENSPFOG00000017118	UPF2	100	81.669	ENSSBOG00000020012	UPF2	100	79.719	Saimiri_boliviensis_boliviensis
ENSPFOG00000017118	UPF2	100	86.261	ENSSFOG00015023788	upf2	100	86.105	Scleropages_formosus
ENSPFOG00000017118	UPF2	90	91.667	ENSSMAG00000007637	UPF2	100	90.358	Scophthalmus_maximus
ENSPFOG00000017118	UPF2	100	94.436	ENSSDUG00000017244	UPF2	99	94.436	Seriola_dumerili
ENSPFOG00000017118	UPF2	99	90.816	ENSSLDG00000016866	UPF2	100	90.581	Seriola_lalandi_dorsalis
ENSPFOG00000017118	UPF2	100	79.095	ENSSARG00000008615	UPF2	100	81.357	Sorex_araneus
ENSPFOG00000017118	UPF2	99	80.250	ENSSPUG00000014544	UPF2	99	80.562	Sphenodon_punctatus
ENSPFOG00000017118	UPF2	68	84.571	ENSSSCG00000011117	-	99	85.029	Sus_scrofa
ENSPFOG00000017118	UPF2	99	83.268	ENSTGUG00000002163	-	100	83.268	Taeniopygia_guttata
ENSPFOG00000017118	UPF2	100	91.158	ENSTRUG00000007519	UPF2	99	91.471	Takifugu_rubripes
ENSPFOG00000017118	UPF2	100	88.203	ENSTNIG00000004453	UPF2	100	88.438	Tetraodon_nigroviridis
ENSPFOG00000017118	UPF2	93	72.460	ENSTBEG00000012679	UPF2	93	72.712	Tupaia_belangeri
ENSPFOG00000017118	UPF2	100	81.343	ENSTTRG00000016388	UPF2	100	80.406	Tursiops_truncatus
ENSPFOG00000017118	UPF2	87	93.258	ENSUAMG00000023560	UPF2	98	93.258	Ursus_americanus
ENSPFOG00000017118	UPF2	100	82.371	ENSUMAG00000012953	UPF2	95	80.140	Ursus_maritimus
ENSPFOG00000017118	UPF2	82	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSPFOG00000017118	UPF2	100	82.371	ENSVVUG00000006166	UPF2	100	80.187	Vulpes_vulpes
ENSPFOG00000017118	UPF2	100	79.439	ENSXETG00000033103	UPF2	91	83.721	Xenopus_tropicalis
ENSPFOG00000017118	UPF2	99	98.822	ENSXCOG00000011604	UPF2	100	98.822	Xiphophorus_couchianus
ENSPFOG00000017118	UPF2	100	98.980	ENSXMAG00000017209	UPF2	100	98.980	Xiphophorus_maculatus