EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000017173 (Gene tree)
Gene ID: 103143395
Gene Symbol: xrcc6
Alias: -
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 6579 bases
Position: chrKI519614.1:2682882-2689460
Accession: 103143395
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000017257	SAP	PF02037.27	7.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000017279	-	2495	-	ENSPFOP00000017257	610 (aa)	XP_007559986	A0A087YGV4

Gene Model

Click here to download ENSPFOG00000017173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000017173's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000017173	xrcc6	99	55.392	ENSG00000196419	XRCC6	99	55.556	Homo_sapiens
ENSPFOG00000017173	xrcc6	99	85.222	ENSAPOG00000012704	xrcc6	100	85.222	Acanthochromis_polyacanthus
ENSPFOG00000017173	xrcc6	100	85.082	ENSACIG00000021277	xrcc6	100	85.082	Amphilophus_citrinellus
ENSPFOG00000017173	xrcc6	100	85.410	ENSAOCG00000021344	xrcc6	100	85.410	Amphiprion_ocellaris
ENSPFOG00000017173	xrcc6	100	85.574	ENSAPEG00000020712	xrcc6	100	85.574	Amphiprion_percula
ENSPFOG00000017173	xrcc6	100	85.082	ENSATEG00000007119	xrcc6	100	85.082	Anabas_testudineus
ENSPFOG00000017173	xrcc6	90	60.766	ENSAPLG00000004469	XRCC6	98	60.878	Anas_platyrhynchos
ENSPFOG00000017173	xrcc6	99	48.768	ENSANAG00000020017	-	99	48.768	Aotus_nancymaae
ENSPFOG00000017173	xrcc6	99	46.656	ENSANAG00000023445	-	99	46.493	Aotus_nancymaae
ENSPFOG00000017173	xrcc6	99	55.065	ENSANAG00000018684	XRCC6	98	56.204	Aotus_nancymaae
ENSPFOG00000017173	xrcc6	99	48.366	ENSANAG00000035230	-	99	48.203	Aotus_nancymaae
ENSPFOG00000017173	xrcc6	100	85.902	ENSACLG00000018608	xrcc6	100	85.902	Astatotilapia_calliptera
ENSPFOG00000017173	xrcc6	99	76.645	ENSAMXG00000007545	xrcc6	99	76.645	Astyanax_mexicanus
ENSPFOG00000017173	xrcc6	99	55.065	ENSCJAG00000045512	XRCC6	99	55.065	Callithrix_jacchus
ENSPFOG00000017173	xrcc6	99	55.719	ENSTSYG00000011348	XRCC6	99	55.719	Carlito_syrichta
ENSPFOG00000017173	xrcc6	99	52.124	ENSCCAG00000030041	-	95	51.634	Cebus_capucinus
ENSPFOG00000017173	xrcc6	99	46.305	ENSCCAG00000037663	-	97	46.305	Cebus_capucinus
ENSPFOG00000017173	xrcc6	93	53.175	ENSCCAG00000030468	-	99	53.175	Cebus_capucinus
ENSPFOG00000017173	xrcc6	99	44.811	ENSCCAG00000035711	-	99	44.646	Cebus_capucinus
ENSPFOG00000017173	xrcc6	99	55.556	ENSCATG00000042366	XRCC6	98	56.729	Cercocebus_atys
ENSPFOG00000017173	xrcc6	99	56.137	ENSCLAG00000016669	XRCC6	99	56.137	Chinchilla_lanigera
ENSPFOG00000017173	xrcc6	99	55.556	ENSCSAG00000005784	XRCC6	99	55.719	Chlorocebus_sabaeus
ENSPFOG00000017173	xrcc6	99	59.934	ENSCPBG00000020535	XRCC6	99	59.934	Chrysemys_picta_bellii
ENSPFOG00000017173	xrcc6	99	34.211	ENSCING00000000633	-	94	34.715	Ciona_intestinalis
ENSPFOG00000017173	xrcc6	99	55.556	ENSCANG00000031032	XRCC6	99	55.719	Colobus_angolensis_palliatus
ENSPFOG00000017173	xrcc6	99	52.145	ENSCGRG00001019029	Xrcc6	99	52.145	Cricetulus_griseus_chok1gshd
ENSPFOG00000017173	xrcc6	99	56.557	ENSCGRG00000001528	Xrcc6	99	56.931	Cricetulus_griseus_crigri
ENSPFOG00000017173	xrcc6	100	79.672	ENSCSEG00000020434	xrcc6	100	79.672	Cynoglossus_semilaevis
ENSPFOG00000017173	xrcc6	100	90.328	ENSCVAG00000002189	xrcc6	100	90.328	Cyprinodon_variegatus
ENSPFOG00000017173	xrcc6	99	74.220	ENSDARG00000071551	xrcc6	99	74.877	Danio_rerio
ENSPFOG00000017173	xrcc6	78	53.285	ENSETEG00000015333	-	77	53.285	Echinops_telfairi
ENSPFOG00000017173	xrcc6	99	54.828	ENSEASG00005001514	XRCC6	99	55.483	Equus_asinus_asinus
ENSPFOG00000017173	xrcc6	99	54.992	ENSECAG00000017563	XRCC6	99	55.398	Equus_caballus
ENSPFOG00000017173	xrcc6	100	74.426	ENSELUG00000020301	xrcc6	100	74.426	Esox_lucius
ENSPFOG00000017173	xrcc6	99	58.728	ENSFALG00000011908	XRCC6	96	58.891	Ficedula_albicollis
ENSPFOG00000017173	xrcc6	100	92.295	ENSFHEG00000016833	xrcc6	100	92.295	Fundulus_heteroclitus
ENSPFOG00000017173	xrcc6	99	67.264	ENSGMOG00000013524	xrcc6	100	67.264	Gadus_morhua
ENSPFOG00000017173	xrcc6	99	59.446	ENSGALG00000011932	XRCC6	94	60.959	Gallus_gallus
ENSPFOG00000017173	xrcc6	100	94.262	ENSGAFG00000008130	xrcc6	100	94.262	Gambusia_affinis
ENSPFOG00000017173	xrcc6	99	82.248	ENSGACG00000004868	xrcc6	99	82.248	Gasterosteus_aculeatus
ENSPFOG00000017173	xrcc6	99	59.770	ENSGAGG00000017518	XRCC6	99	59.770	Gopherus_agassizii
ENSPFOG00000017173	xrcc6	99	55.392	ENSGGOG00000015885	XRCC6	99	55.556	Gorilla_gorilla
ENSPFOG00000017173	xrcc6	93	86.219	ENSHBUG00000023281	xrcc6	100	86.219	Haplochromis_burtoni
ENSPFOG00000017173	xrcc6	99	56.066	ENSHGLG00000018078	XRCC6	99	55.738	Heterocephalus_glaber_female
ENSPFOG00000017173	xrcc6	99	56.066	ENSHGLG00100011264	XRCC6	99	55.738	Heterocephalus_glaber_male
ENSPFOG00000017173	xrcc6	100	78.033	ENSHCOG00000009821	xrcc6	100	78.033	Hippocampus_comes
ENSPFOG00000017173	xrcc6	99	75.822	ENSIPUG00000000767	xrcc6	99	74.713	Ictalurus_punctatus
ENSPFOG00000017173	xrcc6	99	55.646	ENSSTOG00000009490	XRCC6	99	55.974	Ictidomys_tridecemlineatus
ENSPFOG00000017173	xrcc6	99	52.632	ENSJJAG00000017136	Xrcc6	99	53.377	Jaculus_jaculus
ENSPFOG00000017173	xrcc6	99	88.506	ENSKMAG00000002141	xrcc6	99	88.506	Kryptolebias_marmoratus
ENSPFOG00000017173	xrcc6	99	84.539	ENSLBEG00000002691	xrcc6	99	84.539	Labrus_bergylta
ENSPFOG00000017173	xrcc6	87	63.366	ENSLOCG00000011533	xrcc6	99	63.366	Lepisosteus_oculatus
ENSPFOG00000017173	xrcc6	99	55.556	ENSMFAG00000003352	XRCC6	99	55.719	Macaca_fascicularis
ENSPFOG00000017173	xrcc6	99	55.556	ENSMMUG00000001856	XRCC6	99	55.719	Macaca_mulatta
ENSPFOG00000017173	xrcc6	99	55.556	ENSMNEG00000035076	XRCC6	99	55.719	Macaca_nemestrina
ENSPFOG00000017173	xrcc6	99	55.556	ENSMLEG00000019869	XRCC6	99	55.719	Mandrillus_leucophaeus
ENSPFOG00000017173	xrcc6	100	83.633	ENSMAMG00000003368	xrcc6	100	83.633	Mastacembelus_armatus
ENSPFOG00000017173	xrcc6	96	83.135	ENSMAMG00000003405	xrcc6	97	83.135	Mastacembelus_armatus
ENSPFOG00000017173	xrcc6	100	85.738	ENSMZEG00005028080	xrcc6	100	85.738	Maylandia_zebra
ENSPFOG00000017173	xrcc6	99	58.469	ENSMGAG00000012146	XRCC6	94	59.760	Meleagris_gallopavo
ENSPFOG00000017173	xrcc6	99	56.721	ENSMAUG00000017340	Xrcc6	99	57.002	Mesocricetus_auratus
ENSPFOG00000017173	xrcc6	99	56.507	ENSMOCG00000015717	Xrcc6	99	56.672	Microtus_ochrogaster
ENSPFOG00000017173	xrcc6	100	80.820	ENSMMOG00000003536	xrcc6	99	80.820	Mola_mola
ENSPFOG00000017173	xrcc6	100	84.262	ENSMALG00000013912	xrcc6	95	84.262	Monopterus_albus
ENSPFOG00000017173	xrcc6	99	53.279	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.465	Mus_caroli
ENSPFOG00000017173	xrcc6	99	57.541	ENSMUSG00000022471	Xrcc6	99	59.316	Mus_musculus
ENSPFOG00000017173	xrcc6	99	57.377	MGP_PahariEiJ_G0020069	Xrcc6	99	57.377	Mus_pahari
ENSPFOG00000017173	xrcc6	96	58.219	MGP_SPRETEiJ_G0020967	Xrcc6	99	58.219	Mus_spretus
ENSPFOG00000017173	xrcc6	99	56.672	ENSNGAG00000013750	Xrcc6	99	56.672	Nannospalax_galili
ENSPFOG00000017173	xrcc6	100	85.902	ENSNBRG00000004125	xrcc6	100	85.902	Neolamprologus_brichardi
ENSPFOG00000017173	xrcc6	95	58.348	ENSOPRG00000002386	XRCC6	99	58.348	Ochotona_princeps
ENSPFOG00000017173	xrcc6	99	56.301	ENSODEG00000015847	XRCC6	99	55.974	Octodon_degus
ENSPFOG00000017173	xrcc6	100	85.410	ENSONIG00000019715	xrcc6	100	85.410	Oreochromis_niloticus
ENSPFOG00000017173	xrcc6	68	59.856	ENSOANG00000011328	XRCC6	99	59.856	Ornithorhynchus_anatinus
ENSPFOG00000017173	xrcc6	99	56.743	ENSOCUG00000006948	XRCC6	99	57.072	Oryctolagus_cuniculus
ENSPFOG00000017173	xrcc6	100	84.124	ENSORLG00020007820	xrcc6	100	84.124	Oryzias_latipes_hni
ENSPFOG00000017173	xrcc6	100	83.797	ENSORLG00015006406	xrcc6	100	83.797	Oryzias_latipes_hsok
ENSPFOG00000017173	xrcc6	100	83.633	ENSOMEG00000008998	xrcc6	100	83.633	Oryzias_melastigma
ENSPFOG00000017173	xrcc6	99	55.483	ENSOGAG00000008821	XRCC6	99	55.646	Otolemur_garnettii
ENSPFOG00000017173	xrcc6	92	55.676	ENSPPAG00000037167	XRCC6	99	55.676	Pan_paniscus
ENSPFOG00000017173	xrcc6	99	55.392	ENSPTRG00000045824	XRCC6	99	56.581	Pan_troglodytes
ENSPFOG00000017173	xrcc6	99	55.392	ENSPTRG00000022548	XRCC6	99	56.581	Pan_troglodytes
ENSPFOG00000017173	xrcc6	99	55.719	ENSPANG00000001252	XRCC6	99	58.190	Papio_anubis
ENSPFOG00000017173	xrcc6	99	71.382	ENSPKIG00000003974	xrcc6	99	71.382	Paramormyrops_kingsleyae
ENSPFOG00000017173	xrcc6	99	79.734	ENSPMGG00000014220	xrcc6	100	79.734	Periophthalmus_magnuspinnatus
ENSPFOG00000017173	xrcc6	99	56.178	ENSPEMG00000023446	Xrcc6	99	56.271	Peromyscus_maniculatus_bairdii
ENSPFOG00000017173	xrcc6	99	56.956	ENSPCIG00000026409	XRCC6	99	56.956	Phascolarctos_cinereus
ENSPFOG00000017173	xrcc6	100	99.344	ENSPLAG00000000562	xrcc6	100	99.344	Poecilia_latipinna
ENSPFOG00000017173	xrcc6	100	99.344	ENSPMEG00000018478	xrcc6	100	99.344	Poecilia_mexicana
ENSPFOG00000017173	xrcc6	100	96.732	ENSPREG00000020957	xrcc6	93	96.732	Poecilia_reticulata
ENSPFOG00000017173	xrcc6	99	49.020	ENSPPYG00000011876	XRCC6	99	49.183	Pongo_abelii
ENSPFOG00000017173	xrcc6	99	55.410	ENSPVAG00000001168	XRCC6	99	55.410	Pteropus_vampyrus
ENSPFOG00000017173	xrcc6	100	85.574	ENSPNYG00000003815	xrcc6	100	81.435	Pundamilia_nyererei
ENSPFOG00000017173	xrcc6	99	56.721	ENSRNOG00000006392	Xrcc6	99	56.885	Rattus_norvegicus
ENSPFOG00000017173	xrcc6	99	51.307	ENSRBIG00000039794	XRCC6	99	52.641	Rhinopithecus_bieti
ENSPFOG00000017173	xrcc6	99	55.556	ENSRROG00000030297	XRCC6	99	55.719	Rhinopithecus_roxellana
ENSPFOG00000017173	xrcc6	67	50.367	ENSSBOG00000024724	-	99	50.367	Saimiri_boliviensis_boliviensis
ENSPFOG00000017173	xrcc6	99	56.863	ENSSHAG00000010790	XRCC6	99	56.863	Sarcophilus_harrisii
ENSPFOG00000017173	xrcc6	99	74.013	ENSSFOG00015014409	xrcc6	99	74.013	Scleropages_formosus
ENSPFOG00000017173	xrcc6	100	86.066	ENSSMAG00000006496	xrcc6	100	86.066	Scophthalmus_maximus
ENSPFOG00000017173	xrcc6	100	85.902	ENSSDUG00000007542	xrcc6	100	85.902	Seriola_dumerili
ENSPFOG00000017173	xrcc6	100	85.574	ENSSLDG00000009974	xrcc6	100	85.574	Seriola_lalandi_dorsalis
ENSPFOG00000017173	xrcc6	99	58.497	ENSSPUG00000012086	XRCC6	99	58.660	Sphenodon_punctatus
ENSPFOG00000017173	xrcc6	100	86.066	ENSSPAG00000015199	xrcc6	100	86.066	Stegastes_partitus
ENSPFOG00000017173	xrcc6	95	60.445	ENSTGUG00000009852	-	95	60.445	Taeniopygia_guttata
ENSPFOG00000017173	xrcc6	99	77.011	ENSTRUG00000017070	xrcc6	99	77.668	Takifugu_rubripes
ENSPFOG00000017173	xrcc6	96	77.327	ENSTNIG00000012947	xrcc6	99	77.327	Tetraodon_nigroviridis
ENSPFOG00000017173	xrcc6	96	52.740	ENSTBEG00000011736	XRCC6	99	52.740	Tupaia_belangeri
ENSPFOG00000017173	xrcc6	99	46.645	ENSTTRG00000006749	XRCC6	99	47.463	Tursiops_truncatus
ENSPFOG00000017173	xrcc6	100	96.230	ENSXMAG00000009691	xrcc6	100	96.230	Xiphophorus_maculatus