EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000017194 (Gene tree)
Gene ID: -
Gene Symbol: hfm1
Alias: -
Full Name: HFM1%2C ATP-dependent DNA helicase homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 12613 bases
Position: chrKI519840.1:591397-604009
Accession: ZDB-GENE-061207-43
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000017277	ResIII	PF04851.15	5.2e-13	1	1
ENSPFOP00000017277	DEAD	PF00270.29	5.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000017299	-	3141	-	ENSPFOP00000017277	1047 (aa)	-	A0A087YGX4

Gene Model

Click here to download ENSPFOG00000017194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000017194's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000017194	hfm1	75	30.769	ENSPFOG00000015110	snrnp200	66	30.769
ENSPFOG00000017194	hfm1	63	32.864	ENSPFOG00000001462	ascc3	64	32.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000017194	hfm1	99	62.642	ENSG00000162669	HFM1	70	62.642	Homo_sapiens
ENSPFOG00000017194	hfm1	76	86.358	ENSAPOG00000005304	hfm1	90	86.358	Acanthochromis_polyacanthus
ENSPFOG00000017194	hfm1	99	62.952	ENSAMEG00000000432	HFM1	71	62.952	Ailuropoda_melanoleuca
ENSPFOG00000017194	hfm1	100	73.340	ENSACIG00000021553	hfm1	92	73.340	Amphilophus_citrinellus
ENSPFOG00000017194	hfm1	79	82.545	ENSAOCG00000022839	hfm1	96	85.480	Amphiprion_ocellaris
ENSPFOG00000017194	hfm1	79	82.424	ENSAPEG00000014316	hfm1	96	85.823	Amphiprion_percula
ENSPFOG00000017194	hfm1	99	73.822	ENSATEG00000019181	hfm1	91	72.814	Anabas_testudineus
ENSPFOG00000017194	hfm1	100	60.626	ENSAPLG00000013639	HFM1	71	60.379	Anas_platyrhynchos
ENSPFOG00000017194	hfm1	99	61.027	ENSANAG00000029513	HFM1	70	61.027	Aotus_nancymaae
ENSPFOG00000017194	hfm1	99	72.952	ENSACLG00000009033	hfm1	95	79.854	Astatotilapia_calliptera
ENSPFOG00000017194	hfm1	92	71.074	ENSAMXG00000006108	hfm1	67	71.074	Astyanax_mexicanus
ENSPFOG00000017194	hfm1	99	62.452	ENSBTAG00000020856	HFM1	70	62.452	Bos_taurus
ENSPFOG00000017194	hfm1	99	61.656	ENSCJAG00000001843	HFM1	70	61.656	Callithrix_jacchus
ENSPFOG00000017194	hfm1	100	62.252	ENSCAFG00000020187	HFM1	72	61.603	Canis_familiaris
ENSPFOG00000017194	hfm1	100	62.536	ENSTSYG00000014250	HFM1	71	61.873	Carlito_syrichta
ENSPFOG00000017194	hfm1	100	61.312	ENSCPOG00000007421	HFM1	72	61.312	Cavia_porcellus
ENSPFOG00000017194	hfm1	99	61.611	ENSCCAG00000033206	HFM1	70	61.611	Cebus_capucinus
ENSPFOG00000017194	hfm1	99	61.751	ENSCATG00000030987	HFM1	70	61.751	Cercocebus_atys
ENSPFOG00000017194	hfm1	100	59.944	ENSCLAG00000005173	HFM1	71	60.056	Chinchilla_lanigera
ENSPFOG00000017194	hfm1	66	51.950	ENSCSAVG00000005094	-	100	51.950	Ciona_savignyi
ENSPFOG00000017194	hfm1	97	58.892	ENSCGRG00001016995	Hfm1	70	58.967	Cricetulus_griseus_chok1gshd
ENSPFOG00000017194	hfm1	99	61.377	ENSCGRG00000017181	Hfm1	71	61.185	Cricetulus_griseus_crigri
ENSPFOG00000017194	hfm1	100	71.239	ENSCSEG00000017659	hfm1	94	71.361	Cynoglossus_semilaevis
ENSPFOG00000017194	hfm1	68	90.014	ENSCVAG00000005075	hfm1	86	90.014	Cyprinodon_variegatus
ENSPFOG00000017194	hfm1	79	71.947	ENSDARG00000104288	hfm1	75	71.947	Danio_rerio
ENSPFOG00000017194	hfm1	99	60.808	ENSDNOG00000004776	HFM1	71	60.808	Dasypus_novemcinctus
ENSPFOG00000017194	hfm1	99	60.150	ENSDORG00000014661	Hfm1	71	59.962	Dipodomys_ordii
ENSPFOG00000017194	hfm1	99	61.546	ENSEASG00005015424	HFM1	96	61.546	Equus_asinus_asinus
ENSPFOG00000017194	hfm1	100	61.374	ENSECAG00000024039	HFM1	72	61.639	Equus_caballus
ENSPFOG00000017194	hfm1	86	74.452	ENSELUG00000018944	hfm1	97	74.452	Esox_lucius
ENSPFOG00000017194	hfm1	100	62.749	ENSFCAG00000029116	HFM1	71	62.464	Felis_catus
ENSPFOG00000017194	hfm1	92	63.834	ENSFALG00000001781	HFM1	71	60.265	Ficedula_albicollis
ENSPFOG00000017194	hfm1	99	60.967	ENSFDAG00000020816	HFM1	71	60.967	Fukomys_damarensis
ENSPFOG00000017194	hfm1	92	70.881	ENSGMOG00000017436	hfm1	99	70.881	Gadus_morhua
ENSPFOG00000017194	hfm1	100	86.381	ENSGAFG00000018093	hfm1	91	93.727	Gambusia_affinis
ENSPFOG00000017194	hfm1	92	75.207	ENSGACG00000015686	hfm1	99	75.207	Gasterosteus_aculeatus
ENSPFOG00000017194	hfm1	99	62.453	ENSGGOG00000038524	HFM1	70	62.453	Gorilla_gorilla
ENSPFOG00000017194	hfm1	99	74.049	ENSHBUG00000007309	hfm1	95	73.859	Haplochromis_burtoni
ENSPFOG00000017194	hfm1	78	77.273	ENSHCOG00000019632	hfm1	97	77.273	Hippocampus_comes
ENSPFOG00000017194	hfm1	90	70.927	ENSIPUG00000017020	hfm1	90	72.585	Ictalurus_punctatus
ENSPFOG00000017194	hfm1	92	63.872	ENSJJAG00000017198	Hfm1	68	63.872	Jaculus_jaculus
ENSPFOG00000017194	hfm1	85	79.669	ENSKMAG00000002282	hfm1	90	79.669	Kryptolebias_marmoratus
ENSPFOG00000017194	hfm1	100	72.875	ENSLBEG00000006759	hfm1	95	80.072	Labrus_bergylta
ENSPFOG00000017194	hfm1	92	64.337	ENSLACG00000010698	HFM1	100	60.463	Latimeria_chalumnae
ENSPFOG00000017194	hfm1	99	66.349	ENSLOCG00000004931	hfm1	94	66.349	Lepisosteus_oculatus
ENSPFOG00000017194	hfm1	64	71.791	ENSLAFG00000015903	-	90	71.791	Loxodonta_africana
ENSPFOG00000017194	hfm1	99	59.224	ENSMFAG00000003649	HFM1	70	59.224	Macaca_fascicularis
ENSPFOG00000017194	hfm1	99	61.846	ENSMMUG00000006819	HFM1	70	61.846	Macaca_mulatta
ENSPFOG00000017194	hfm1	76	86.486	ENSMAMG00000004623	hfm1	97	81.477	Mastacembelus_armatus
ENSPFOG00000017194	hfm1	99	72.952	ENSMZEG00005004679	hfm1	95	79.854	Maylandia_zebra
ENSPFOG00000017194	hfm1	72	68.504	ENSMGAG00000008437	HFM1	95	68.504	Meleagris_gallopavo
ENSPFOG00000017194	hfm1	100	60.592	ENSMAUG00000018858	Hfm1	71	60.401	Mesocricetus_auratus
ENSPFOG00000017194	hfm1	100	61.205	ENSMICG00000037935	HFM1	71	61.017	Microcebus_murinus
ENSPFOG00000017194	hfm1	100	60.456	ENSMOCG00000014812	Hfm1	71	60.324	Microtus_ochrogaster
ENSPFOG00000017194	hfm1	85	77.542	ENSMMOG00000006148	hfm1	92	80.964	Mola_mola
ENSPFOG00000017194	hfm1	100	73.594	ENSMALG00000002401	hfm1	94	81.477	Monopterus_albus
ENSPFOG00000017194	hfm1	92	73.504	MGP_CAROLIEiJ_G0027496	Hfm1	69	73.504	Mus_caroli
ENSPFOG00000017194	hfm1	99	60.266	ENSMUSG00000043410	Hfm1	70	59.886	Mus_musculus
ENSPFOG00000017194	hfm1	99	60.878	MGP_PahariEiJ_G0017268	Hfm1	73	60.150	Mus_pahari
ENSPFOG00000017194	hfm1	99	61.223	MGP_SPRETEiJ_G0028495	Hfm1	70	60.361	Mus_spretus
ENSPFOG00000017194	hfm1	100	61.524	ENSMPUG00000004594	HFM1	72	61.524	Mustela_putorius_furo
ENSPFOG00000017194	hfm1	100	62.193	ENSMLUG00000010200	HFM1	71	61.873	Myotis_lucifugus
ENSPFOG00000017194	hfm1	99	70.057	ENSNBRG00000002910	hfm1	97	80.218	Neolamprologus_brichardi
ENSPFOG00000017194	hfm1	99	59.147	ENSNLEG00000010285	HFM1	70	59.147	Nomascus_leucogenys
ENSPFOG00000017194	hfm1	92	60.575	ENSMEUG00000015788	HFM1	65	60.575	Notamacropus_eugenii
ENSPFOG00000017194	hfm1	81	61.782	ENSOPRG00000013916	HFM1	60	61.782	Ochotona_princeps
ENSPFOG00000017194	hfm1	98	76.476	ENSONIG00000010590	hfm1	98	76.510	Oreochromis_niloticus
ENSPFOG00000017194	hfm1	78	80.049	ENSORLG00000026844	hfm1	99	80.049	Oryzias_latipes
ENSPFOG00000017194	hfm1	91	69.424	ENSORLG00020002951	hfm1	76	69.167	Oryzias_latipes_hni
ENSPFOG00000017194	hfm1	99	71.814	ENSOMEG00000016474	hfm1	74	71.814	Oryzias_melastigma
ENSPFOG00000017194	hfm1	92	65.768	ENSOGAG00000032369	HFM1	78	65.768	Otolemur_garnettii
ENSPFOG00000017194	hfm1	99	62.298	ENSOARG00000015812	HFM1	71	62.298	Ovis_aries
ENSPFOG00000017194	hfm1	99	63.208	ENSPPAG00000024582	HFM1	76	62.736	Pan_paniscus
ENSPFOG00000017194	hfm1	100	63.083	ENSPPRG00000003270	HFM1	71	62.797	Panthera_pardus
ENSPFOG00000017194	hfm1	100	63.083	ENSPTIG00000018881	HFM1	71	62.797	Panthera_tigris_altaica
ENSPFOG00000017194	hfm1	99	62.830	ENSPTRG00000000948	HFM1	70	62.830	Pan_troglodytes
ENSPFOG00000017194	hfm1	99	61.656	ENSPANG00000009838	HFM1	70	61.656	Papio_anubis
ENSPFOG00000017194	hfm1	85	70.661	ENSPKIG00000003810	hfm1	94	71.921	Paramormyrops_kingsleyae
ENSPFOG00000017194	hfm1	79	76.242	ENSPMGG00000011059	hfm1	99	76.242	Periophthalmus_magnuspinnatus
ENSPFOG00000017194	hfm1	99	60.228	ENSPEMG00000022852	Hfm1	70	59.848	Peromyscus_maniculatus_bairdii
ENSPFOG00000017194	hfm1	99	60.737	ENSPCIG00000014233	HFM1	72	60.517	Phascolarctos_cinereus
ENSPFOG00000017194	hfm1	100	92.653	ENSPLAG00000000571	hfm1	92	92.557	Poecilia_latipinna
ENSPFOG00000017194	hfm1	100	92.646	ENSPMEG00000019475	hfm1	93	92.646	Poecilia_mexicana
ENSPFOG00000017194	hfm1	100	90.353	ENSPREG00000007803	hfm1	91	94.335	Poecilia_reticulata
ENSPFOG00000017194	hfm1	99	62.736	ENSPPYG00000001163	HFM1	70	62.736	Pongo_abelii
ENSPFOG00000017194	hfm1	92	59.875	ENSPVAG00000009713	HFM1	68	59.875	Pteropus_vampyrus
ENSPFOG00000017194	hfm1	99	72.529	ENSPNYG00000001795	hfm1	95	79.733	Pundamilia_nyererei
ENSPFOG00000017194	hfm1	80	73.050	ENSPNAG00000010865	hfm1	84	73.050	Pygocentrus_nattereri
ENSPFOG00000017194	hfm1	99	61.553	ENSRNOG00000023299	Hfm1	70	61.266	Rattus_norvegicus
ENSPFOG00000017194	hfm1	99	61.941	ENSRROG00000045569	HFM1	70	61.941	Rhinopithecus_roxellana
ENSPFOG00000017194	hfm1	92	65.564	ENSSBOG00000027456	HFM1	68	65.564	Saimiri_boliviensis_boliviensis
ENSPFOG00000017194	hfm1	56	71.622	ENSSHAG00000014616	-	67	71.622	Sarcophilus_harrisii
ENSPFOG00000017194	hfm1	92	70.408	ENSSFOG00015020129	hfm1	65	70.408	Scleropages_formosus
ENSPFOG00000017194	hfm1	85	79.955	ENSSMAG00000006907	hfm1	86	79.955	Scophthalmus_maximus
ENSPFOG00000017194	hfm1	79	82.424	ENSSDUG00000011424	hfm1	93	82.424	Seriola_dumerili
ENSPFOG00000017194	hfm1	79	82.688	ENSSLDG00000016386	hfm1	92	82.688	Seriola_lalandi_dorsalis
ENSPFOG00000017194	hfm1	98	71.193	ENSSPAG00000001023	hfm1	93	82.909	Stegastes_partitus
ENSPFOG00000017194	hfm1	100	61.162	ENSSSCG00000006912	HFM1	78	61.162	Sus_scrofa
ENSPFOG00000017194	hfm1	92	63.825	ENSTGUG00000006172	HFM1	99	63.825	Taeniopygia_guttata
ENSPFOG00000017194	hfm1	100	61.568	ENSTTRG00000013933	HFM1	72	61.190	Tursiops_truncatus
ENSPFOG00000017194	hfm1	100	60.019	ENSVPAG00000011331	HFM1	71	60.019	Vicugna_pacos
ENSPFOG00000017194	hfm1	99	61.680	ENSVVUG00000020760	HFM1	99	61.583	Vulpes_vulpes
ENSPFOG00000017194	hfm1	78	94.212	ENSXMAG00000004178	hfm1	90	94.212	Xiphophorus_maculatus