EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000017253 (Gene tree)
Gene ID: 103137443
Gene Symbol: stau1
Alias: -
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 14498 bases
Position: chrKI519612.1:5200464-5214961
Accession: 103137443
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000017357	dsrm	PF00035.26	1e-48	1	4
ENSPFOP00000017357	dsrm	PF00035.26	1e-48	2	4
ENSPFOP00000017357	dsrm	PF00035.26	1e-48	3	4
ENSPFOP00000017357	dsrm	PF00035.26	1e-48	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000017379	-	2796	XM_007551187	ENSPFOP00000017357	696 (aa)	XP_007551249	A0A087YH54

Gene Model

Click here to download ENSPFOG00000017253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000017253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000017253	stau1	87	48.331	ENSPFOG00000013147	stau2	97	46.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000017253	stau1	96	73.828	ENSG00000124214	STAU1	99	73.828	Homo_sapiens
ENSPFOG00000017253	stau1	100	88.793	ENSAPOG00000017260	stau1	100	88.793	Acanthochromis_polyacanthus
ENSPFOG00000017253	stau1	100	69.460	ENSAMEG00000013681	STAU1	99	69.460	Ailuropoda_melanoleuca
ENSPFOG00000017253	stau1	99	86.043	ENSACIG00000015918	stau1	100	86.925	Amphilophus_citrinellus
ENSPFOG00000017253	stau1	99	89.496	ENSAOCG00000012224	stau1	100	89.368	Amphiprion_ocellaris
ENSPFOG00000017253	stau1	99	89.496	ENSAPEG00000012308	stau1	100	89.368	Amphiprion_percula
ENSPFOG00000017253	stau1	100	89.368	ENSATEG00000024600	stau1	100	89.671	Anabas_testudineus
ENSPFOG00000017253	stau1	100	71.310	ENSAPLG00000010527	STAU1	100	71.310	Anas_platyrhynchos
ENSPFOG00000017253	stau1	100	71.932	ENSACAG00000015909	STAU1	99	71.932	Anolis_carolinensis
ENSPFOG00000017253	stau1	96	72.780	ENSANAG00000032714	STAU1	99	72.780	Aotus_nancymaae
ENSPFOG00000017253	stau1	99	88.058	ENSACLG00000012270	stau1	100	87.931	Astatotilapia_calliptera
ENSPFOG00000017253	stau1	87	74.908	ENSAMXG00000016812	stau1	98	75.092	Astyanax_mexicanus
ENSPFOG00000017253	stau1	96	73.633	ENSBTAG00000000241	STAU1	99	73.633	Bos_taurus
ENSPFOG00000017253	stau1	96	73.633	ENSCJAG00000016233	STAU1	99	73.633	Callithrix_jacchus
ENSPFOG00000017253	stau1	96	73.438	ENSCAFG00000011347	STAU1	97	73.438	Canis_familiaris
ENSPFOG00000017253	stau1	96	70.175	ENSCAFG00020017123	STAU1	99	73.039	Canis_lupus_dingo
ENSPFOG00000017253	stau1	96	73.242	ENSCHIG00000001799	-	99	73.242	Capra_hircus
ENSPFOG00000017253	stau1	96	72.461	ENSTSYG00000036179	-	99	72.461	Carlito_syrichta
ENSPFOG00000017253	stau1	72	72.510	ENSCAPG00000017041	STAU1	99	72.311	Cavia_aperea
ENSPFOG00000017253	stau1	71	70.800	ENSCPOG00000005566	STAU1	99	70.800	Cavia_porcellus
ENSPFOG00000017253	stau1	96	72.780	ENSCCAG00000034339	STAU1	99	72.780	Cebus_capucinus
ENSPFOG00000017253	stau1	96	75.375	ENSCATG00000028474	STAU1	99	75.375	Cercocebus_atys
ENSPFOG00000017253	stau1	71	59.920	ENSCLAG00000002784	-	99	59.719	Chinchilla_lanigera
ENSPFOG00000017253	stau1	71	73.600	ENSCLAG00000006516	-	99	73.600	Chinchilla_lanigera
ENSPFOG00000017253	stau1	72	73.904	ENSCSAG00000014986	STAU1	99	73.904	Chlorocebus_sabaeus
ENSPFOG00000017253	stau1	96	73.879	ENSCHOG00000001511	STAU1	99	73.879	Choloepus_hoffmanni
ENSPFOG00000017253	stau1	100	72.316	ENSCPBG00000026741	STAU1	100	72.316	Chrysemys_picta_bellii
ENSPFOG00000017253	stau1	96	74.023	ENSCANG00000039220	STAU1	99	74.023	Colobus_angolensis_palliatus
ENSPFOG00000017253	stau1	71	69.600	ENSCGRG00001013453	Stau1	99	69.600	Cricetulus_griseus_chok1gshd
ENSPFOG00000017253	stau1	71	69.600	ENSCGRG00000007216	Stau1	99	69.600	Cricetulus_griseus_crigri
ENSPFOG00000017253	stau1	99	75.915	ENSCSEG00000000792	stau1	99	77.042	Cynoglossus_semilaevis
ENSPFOG00000017253	stau1	93	86.719	ENSCVAG00000005906	stau1	100	87.500	Cyprinodon_variegatus
ENSPFOG00000017253	stau1	100	78.223	ENSDARG00000044182	stau1	100	79.154	Danio_rerio
ENSPFOG00000017253	stau1	96	73.879	ENSDNOG00000014933	STAU1	97	73.684	Dasypus_novemcinctus
ENSPFOG00000017253	stau1	71	72.470	ENSDORG00000030220	Stau1	99	72.470	Dipodomys_ordii
ENSPFOG00000017253	stau1	63	76.159	ENSETEG00000018235	STAU1	88	76.159	Echinops_telfairi
ENSPFOG00000017253	stau1	96	73.166	ENSEASG00005023343	STAU1	99	73.166	Equus_asinus_asinus
ENSPFOG00000017253	stau1	96	74.023	ENSECAG00000012894	STAU1	99	74.023	Equus_caballus
ENSPFOG00000017253	stau1	56	77.919	ENSEEUG00000014344	STAU1	68	77.919	Erinaceus_europaeus
ENSPFOG00000017253	stau1	99	80.622	ENSELUG00000002529	stau1	99	81.832	Esox_lucius
ENSPFOG00000017253	stau1	96	74.023	ENSFCAG00000001447	STAU1	99	74.023	Felis_catus
ENSPFOG00000017253	stau1	100	72.688	ENSFALG00000012940	STAU1	100	72.688	Ficedula_albicollis
ENSPFOG00000017253	stau1	72	55.578	ENSFDAG00000020837	-	99	53.586	Fukomys_damarensis
ENSPFOG00000017253	stau1	71	73.200	ENSFDAG00000014119	-	99	73.200	Fukomys_damarensis
ENSPFOG00000017253	stau1	100	93.391	ENSFHEG00000013517	stau1	100	93.391	Fundulus_heteroclitus
ENSPFOG00000017253	stau1	100	70.391	ENSGMOG00000016850	stau1	100	70.391	Gadus_morhua
ENSPFOG00000017253	stau1	100	73.542	ENSGALG00000004736	STAU1	100	73.542	Gallus_gallus
ENSPFOG00000017253	stau1	100	97.414	ENSGAFG00000010437	stau1	100	97.414	Gambusia_affinis
ENSPFOG00000017253	stau1	99	87.194	ENSGACG00000001352	stau1	100	87.069	Gasterosteus_aculeatus
ENSPFOG00000017253	stau1	100	72.934	ENSGAGG00000009825	STAU1	100	72.934	Gopherus_agassizii
ENSPFOG00000017253	stau1	96	68.269	ENSGGOG00000025351	STAU1	96	77.364	Gorilla_gorilla
ENSPFOG00000017253	stau1	99	87.914	ENSHBUG00000023668	stau1	100	87.787	Haplochromis_burtoni
ENSPFOG00000017253	stau1	71	74.089	ENSHGLG00000008730	STAU1	99	74.089	Heterocephalus_glaber_female
ENSPFOG00000017253	stau1	71	74.089	ENSHGLG00100000098	STAU1	99	74.089	Heterocephalus_glaber_male
ENSPFOG00000017253	stau1	99	81.923	ENSHCOG00000018461	stau1	100	81.948	Hippocampus_comes
ENSPFOG00000017253	stau1	99	74.026	ENSIPUG00000023725	stau1	99	74.026	Ictalurus_punctatus
ENSPFOG00000017253	stau1	71	73.684	ENSSTOG00000003634	STAU1	99	73.684	Ictidomys_tridecemlineatus
ENSPFOG00000017253	stau1	71	72.874	ENSJJAG00000020032	Stau1	99	72.874	Jaculus_jaculus
ENSPFOG00000017253	stau1	99	84.670	ENSKMAG00000007135	stau1	99	85.673	Kryptolebias_marmoratus
ENSPFOG00000017253	stau1	100	86.638	ENSLBEG00000020172	stau1	100	86.638	Labrus_bergylta
ENSPFOG00000017253	stau1	98	72.818	ENSLACG00000016157	STAU1	97	72.818	Latimeria_chalumnae
ENSPFOG00000017253	stau1	100	75.323	ENSLOCG00000003134	stau1	100	76.327	Lepisosteus_oculatus
ENSPFOG00000017253	stau1	73	74.023	ENSLAFG00000003238	STAU1	99	74.023	Loxodonta_africana
ENSPFOG00000017253	stau1	96	75.375	ENSMFAG00000040931	STAU1	99	76.667	Macaca_fascicularis
ENSPFOG00000017253	stau1	96	68.269	ENSMMUG00000002302	STAU1	99	76.667	Macaca_mulatta
ENSPFOG00000017253	stau1	96	74.419	ENSMNEG00000033821	STAU1	99	74.419	Macaca_nemestrina
ENSPFOG00000017253	stau1	96	73.828	ENSMLEG00000031383	STAU1	99	73.828	Mandrillus_leucophaeus
ENSPFOG00000017253	stau1	100	88.937	ENSMAMG00000017586	stau1	100	89.371	Mastacembelus_armatus
ENSPFOG00000017253	stau1	99	88.058	ENSMZEG00005015605	stau1	100	87.931	Maylandia_zebra
ENSPFOG00000017253	stau1	100	71.448	ENSMGAG00000004719	STAU1	100	71.448	Meleagris_gallopavo
ENSPFOG00000017253	stau1	71	69.600	ENSMAUG00000013846	Stau1	99	69.600	Mesocricetus_auratus
ENSPFOG00000017253	stau1	96	72.587	ENSMICG00000001995	STAU1	99	72.587	Microcebus_murinus
ENSPFOG00000017253	stau1	71	70.200	ENSMOCG00000018743	Stau1	99	70.200	Microtus_ochrogaster
ENSPFOG00000017253	stau1	100	84.935	ENSMMOG00000015455	stau1	100	84.935	Mola_mola
ENSPFOG00000017253	stau1	96	72.821	ENSMODG00000016276	STAU1	99	72.821	Monodelphis_domestica
ENSPFOG00000017253	stau1	99	88.921	ENSMALG00000000045	stau1	99	88.921	Monopterus_albus
ENSPFOG00000017253	stau1	71	70.648	MGP_CAROLIEiJ_G0024699	Stau1	99	70.816	Mus_caroli
ENSPFOG00000017253	stau1	71	70.445	ENSMUSG00000039536	Stau1	99	70.612	Mus_musculus
ENSPFOG00000017253	stau1	71	70.040	MGP_PahariEiJ_G0026141	Stau1	99	70.040	Mus_pahari
ENSPFOG00000017253	stau1	71	70.445	MGP_SPRETEiJ_G0025619	Stau1	99	70.612	Mus_spretus
ENSPFOG00000017253	stau1	96	70.623	ENSMPUG00000017581	STAU1	99	70.623	Mustela_putorius_furo
ENSPFOG00000017253	stau1	96	72.427	ENSMLUG00000008407	STAU1	97	72.427	Myotis_lucifugus
ENSPFOG00000017253	stau1	71	72.200	ENSNGAG00000007108	Stau1	99	72.200	Nannospalax_galili
ENSPFOG00000017253	stau1	99	87.770	ENSNBRG00000017596	stau1	100	87.644	Neolamprologus_brichardi
ENSPFOG00000017253	stau1	96	73.828	ENSNLEG00000006955	STAU1	99	73.828	Nomascus_leucogenys
ENSPFOG00000017253	stau1	66	77.322	ENSMEUG00000003263	STAU1	80	77.322	Notamacropus_eugenii
ENSPFOG00000017253	stau1	91	71.484	ENSOPRG00000014569	STAU1	89	71.484	Ochotona_princeps
ENSPFOG00000017253	stau1	72	73.904	ENSODEG00000006523	STAU1	99	73.904	Octodon_degus
ENSPFOG00000017253	stau1	100	85.335	ENSONIG00000004152	stau1	99	85.335	Oreochromis_niloticus
ENSPFOG00000017253	stau1	100	70.945	ENSOANG00000006394	STAU1	100	70.945	Ornithorhynchus_anatinus
ENSPFOG00000017253	stau1	96	72.852	ENSOCUG00000006214	STAU1	99	72.852	Oryctolagus_cuniculus
ENSPFOG00000017253	stau1	100	85.079	ENSOMEG00000002388	stau1	100	85.079	Oryzias_melastigma
ENSPFOG00000017253	stau1	71	50.398	ENSOGAG00000028222	-	99	49.701	Otolemur_garnettii
ENSPFOG00000017253	stau1	96	73.633	ENSOGAG00000002127	STAU1	97	73.633	Otolemur_garnettii
ENSPFOG00000017253	stau1	96	73.242	ENSOARG00000012204	STAU1	97	73.242	Ovis_aries
ENSPFOG00000017253	stau1	96	68.269	ENSPPAG00000032023	STAU1	96	77.364	Pan_paniscus
ENSPFOG00000017253	stau1	96	74.023	ENSPPRG00000003436	STAU1	99	74.023	Panthera_pardus
ENSPFOG00000017253	stau1	96	74.023	ENSPTIG00000011768	STAU1	99	74.023	Panthera_tigris_altaica
ENSPFOG00000017253	stau1	96	68.269	ENSPTRG00000023130	STAU1	96	77.364	Pan_troglodytes
ENSPFOG00000017253	stau1	96	75.375	ENSPANG00000020560	STAU1	99	75.375	Papio_anubis
ENSPFOG00000017253	stau1	99	76.662	ENSPKIG00000024588	stau1	99	77.652	Paramormyrops_kingsleyae
ENSPFOG00000017253	stau1	100	73.077	ENSPSIG00000010731	STAU1	99	73.077	Pelodiscus_sinensis
ENSPFOG00000017253	stau1	100	83.834	ENSPMGG00000018553	stau1	100	83.691	Periophthalmus_magnuspinnatus
ENSPFOG00000017253	stau1	71	69.800	ENSPEMG00000022045	Stau1	99	69.800	Peromyscus_maniculatus_bairdii
ENSPFOG00000017253	stau1	99	70.496	ENSPCIG00000023269	STAU1	99	72.429	Phascolarctos_cinereus
ENSPFOG00000017253	stau1	58	95.522	ENSPLAG00000014829	stau1	97	96.410	Poecilia_latipinna
ENSPFOG00000017253	stau1	100	95.402	ENSPMEG00000007495	stau1	100	95.402	Poecilia_mexicana
ENSPFOG00000017253	stau1	100	98.132	ENSPREG00000003477	stau1	100	98.132	Poecilia_reticulata
ENSPFOG00000017253	stau1	96	73.438	ENSPPYG00000011111	STAU1	99	73.438	Pongo_abelii
ENSPFOG00000017253	stau1	69	66.875	ENSPCAG00000002459	STAU1	100	66.875	Procavia_capensis
ENSPFOG00000017253	stau1	96	73.242	ENSPCOG00000027746	STAU1	99	73.242	Propithecus_coquereli
ENSPFOG00000017253	stau1	63	77.483	ENSPVAG00000015019	STAU1	86	77.483	Pteropus_vampyrus
ENSPFOG00000017253	stau1	99	87.914	ENSPNYG00000014436	stau1	100	87.787	Pundamilia_nyererei
ENSPFOG00000017253	stau1	99	77.000	ENSPNAG00000011323	stau1	99	77.000	Pygocentrus_nattereri
ENSPFOG00000017253	stau1	71	69.600	ENSRNOG00000007781	Stau1	99	69.600	Rattus_norvegicus
ENSPFOG00000017253	stau1	72	73.360	ENSRBIG00000037345	STAU1	100	73.161	Rhinopithecus_bieti
ENSPFOG00000017253	stau1	96	74.419	ENSRROG00000039008	STAU1	99	74.419	Rhinopithecus_roxellana
ENSPFOG00000017253	stau1	96	72.780	ENSSBOG00000034448	STAU1	99	72.780	Saimiri_boliviensis_boliviensis
ENSPFOG00000017253	stau1	96	74.369	ENSSHAG00000009492	STAU1	99	72.674	Sarcophilus_harrisii
ENSPFOG00000017253	stau1	99	79.197	ENSSFOG00015021497	stau1	99	79.197	Scleropages_formosus
ENSPFOG00000017253	stau1	100	88.649	ENSSMAG00000017410	stau1	100	88.649	Scophthalmus_maximus
ENSPFOG00000017253	stau1	99	89.496	ENSSDUG00000019439	stau1	100	89.368	Seriola_dumerili
ENSPFOG00000017253	stau1	100	89.368	ENSSLDG00000025040	stau1	100	89.368	Seriola_lalandi_dorsalis
ENSPFOG00000017253	stau1	100	71.893	ENSSPUG00000017983	STAU1	99	72.165	Sphenodon_punctatus
ENSPFOG00000017253	stau1	100	89.224	ENSSPAG00000019275	stau1	100	89.224	Stegastes_partitus
ENSPFOG00000017253	stau1	96	74.219	ENSSSCG00000027444	STAU1	99	74.422	Sus_scrofa
ENSPFOG00000017253	stau1	100	70.151	ENSTGUG00000008784	STAU1	100	70.151	Taeniopygia_guttata
ENSPFOG00000017253	stau1	100	84.770	ENSTRUG00000005837	stau1	100	85.776	Takifugu_rubripes
ENSPFOG00000017253	stau1	97	85.015	ENSTNIG00000014732	stau1	99	85.015	Tetraodon_nigroviridis
ENSPFOG00000017253	stau1	96	63.548	ENSTBEG00000009404	STAU1	99	63.548	Tupaia_belangeri
ENSPFOG00000017253	stau1	66	73.650	ENSTTRG00000004285	STAU1	80	73.650	Tursiops_truncatus
ENSPFOG00000017253	stau1	72	72.638	ENSUAMG00000025449	STAU1	99	72.638	Ursus_americanus
ENSPFOG00000017253	stau1	54	70.312	ENSUMAG00000024475	STAU1	89	70.312	Ursus_maritimus
ENSPFOG00000017253	stau1	96	74.219	ENSVPAG00000001313	STAU1	99	74.219	Vicugna_pacos
ENSPFOG00000017253	stau1	96	70.175	ENSVVUG00000022325	STAU1	99	70.175	Vulpes_vulpes
ENSPFOG00000017253	stau1	97	71.154	ENSXETG00000001783	stau1	96	70.858	Xenopus_tropicalis
ENSPFOG00000017253	stau1	56	93.095	ENSXCOG00000008804	stau1	98	93.095	Xiphophorus_couchianus
ENSPFOG00000017253	stau1	100	97.126	ENSXMAG00000016175	stau1	100	97.126	Xiphophorus_maculatus