EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000017451 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153215
Alias: -
Full Name: zgc:153215
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 1935 bases
Position: chrKI519687.1:1759506-1761440
Accession: ZDB-GENE-061103-58
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000017521	RRM_1	PF00076.22	9.9e-22	1	2
ENSPFOP00000017521	RRM_1	PF00076.22	9.9e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000017543	-	1800	-	ENSPFOP00000017521	600 (aa)	-	A0A087YHL8

Gene Model

Click here to download ENSPFOG00000017451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000017451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000017451	zgc:153215	70	45.133	ENSPFOG00000020937	rbm12b	71	43.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000017451	zgc:153215	66	51.190	ENSG00000183808	RBM12B	98	52.500	Homo_sapiens
ENSPFOG00000017451	zgc:153215	65	67.568	ENSAPOG00000008836	zgc:153215	91	67.568	Acanthochromis_polyacanthus
ENSPFOG00000017451	zgc:153215	70	47.414	ENSAPOG00000013963	rbm12b	74	47.414	Acanthochromis_polyacanthus
ENSPFOG00000017451	zgc:153215	83	58.696	ENSACIG00000013317	zgc:153215	99	58.696	Amphilophus_citrinellus
ENSPFOG00000017451	zgc:153215	66	54.651	ENSACIG00000014943	rbm12b	96	54.651	Amphilophus_citrinellus
ENSPFOG00000017451	zgc:153215	72	45.238	ENSAOCG00000024270	rbm12b	74	45.238	Amphiprion_ocellaris
ENSPFOG00000017451	zgc:153215	68	71.053	ENSAOCG00000010819	zgc:153215	91	68.132	Amphiprion_ocellaris
ENSPFOG00000017451	zgc:153215	72	45.238	ENSAPEG00000022079	rbm12b	92	44.882	Amphiprion_percula
ENSPFOG00000017451	zgc:153215	82	68.293	ENSATEG00000001886	zgc:153215	95	62.376	Anabas_testudineus
ENSPFOG00000017451	zgc:153215	76	44.444	ENSATEG00000004578	rbm12b	73	44.444	Anabas_testudineus
ENSPFOG00000017451	zgc:153215	70	51.163	ENSAPLG00000002020	RBM12B	63	51.163	Anas_platyrhynchos
ENSPFOG00000017451	zgc:153215	69	46.154	ENSANAG00000034015	RBM12B	51	46.154	Aotus_nancymaae
ENSPFOG00000017451	zgc:153215	77	42.143	ENSACLG00000005575	rbm12b	72	42.143	Astatotilapia_calliptera
ENSPFOG00000017451	zgc:153215	98	53.731	ENSACLG00000007675	zgc:153215	99	53.731	Astatotilapia_calliptera
ENSPFOG00000017451	zgc:153215	68	51.613	ENSAMXG00000020853	zgc:153215	70	51.613	Astyanax_mexicanus
ENSPFOG00000017451	zgc:153215	66	55.814	ENSAMXG00000041973	rbm12b	74	55.814	Astyanax_mexicanus
ENSPFOG00000017451	zgc:153215	66	51.190	ENSCHIG00000006790	RBM12B	57	51.190	Capra_hircus
ENSPFOG00000017451	zgc:153215	66	51.163	ENSCPBG00000003061	RBM12B	61	51.163	Chrysemys_picta_bellii
ENSPFOG00000017451	zgc:153215	67	51.190	ENSCGRG00001008710	-	50	51.190	Cricetulus_griseus_chok1gshd
ENSPFOG00000017451	zgc:153215	72	43.548	ENSCSEG00000004610	rbm12b	69	43.548	Cynoglossus_semilaevis
ENSPFOG00000017451	zgc:153215	73	64.894	ENSCVAG00000009259	-	100	64.894	Cyprinodon_variegatus
ENSPFOG00000017451	zgc:153215	68	50.000	ENSCVAG00000011047	rbm12b	71	41.803	Cyprinodon_variegatus
ENSPFOG00000017451	zgc:153215	70	55.814	ENSDARG00000079717	rbm12b	62	55.814	Danio_rerio
ENSPFOG00000017451	zgc:153215	69	49.515	ENSDARG00000055889	zgc:153215	82	49.515	Danio_rerio
ENSPFOG00000017451	zgc:153215	68	46.939	ENSETEG00000013005	-	57	46.939	Echinops_telfairi
ENSPFOG00000017451	zgc:153215	62	43.038	ENSEBUG00000004292	-	59	43.038	Eptatretus_burgeri
ENSPFOG00000017451	zgc:153215	67	67.500	ENSELUG00000009039	zgc:153215	85	63.736	Esox_lucius
ENSPFOG00000017451	zgc:153215	77	41.007	ENSFALG00000014893	RBM12B	62	50.000	Ficedula_albicollis
ENSPFOG00000017451	zgc:153215	68	47.423	ENSFHEG00000016425	rbm12b	73	42.149	Fundulus_heteroclitus
ENSPFOG00000017451	zgc:153215	70	76.042	ENSFHEG00000014539	zgc:153215	95	76.042	Fundulus_heteroclitus
ENSPFOG00000017451	zgc:153215	72	44.800	ENSGMOG00000013467	rbm12b	71	44.800	Gadus_morhua
ENSPFOG00000017451	zgc:153215	70	50.000	ENSGALG00000035129	RBM12B	60	50.000	Gallus_gallus
ENSPFOG00000017451	zgc:153215	79	94.175	ENSGAFG00000007845	zgc:153215	99	94.175	Gambusia_affinis
ENSPFOG00000017451	zgc:153215	69	44.954	ENSGAFG00000007224	rbm12b	74	42.623	Gambusia_affinis
ENSPFOG00000017451	zgc:153215	71	42.623	ENSGACG00000008682	rbm12b	72	42.623	Gasterosteus_aculeatus
ENSPFOG00000017451	zgc:153215	66	51.163	ENSGAGG00000009774	RBM12B	61	51.163	Gopherus_agassizii
ENSPFOG00000017451	zgc:153215	99	42.178	ENSHBUG00000016150	zgc:153215	99	42.178	Haplochromis_burtoni
ENSPFOG00000017451	zgc:153215	77	41.429	ENSHBUG00000016227	rbm12b	72	41.429	Haplochromis_burtoni
ENSPFOG00000017451	zgc:153215	72	37.600	ENSHCOG00000014952	rbm12b	73	37.600	Hippocampus_comes
ENSPFOG00000017451	zgc:153215	71	49.000	ENSIPUG00000019731	zgc:153215	83	49.000	Ictalurus_punctatus
ENSPFOG00000017451	zgc:153215	71	42.636	ENSIPUG00000001167	RBM12B	61	53.488	Ictalurus_punctatus
ENSPFOG00000017451	zgc:153215	66	51.190	ENSSTOG00000027445	RBM12B	50	51.190	Ictidomys_tridecemlineatus
ENSPFOG00000017451	zgc:153215	66	48.837	ENSKMAG00000013715	rbm12b	74	48.837	Kryptolebias_marmoratus
ENSPFOG00000017451	zgc:153215	69	56.731	ENSKMAG00000004958	zgc:153215	94	56.731	Kryptolebias_marmoratus
ENSPFOG00000017451	zgc:153215	66	46.512	ENSKMAG00000013704	rbm12b	71	46.512	Kryptolebias_marmoratus
ENSPFOG00000017451	zgc:153215	74	70.000	ENSLBEG00000002597	zgc:153215	99	61.765	Labrus_bergylta
ENSPFOG00000017451	zgc:153215	68	46.535	ENSLACG00000007177	RBM12B	63	46.602	Latimeria_chalumnae
ENSPFOG00000017451	zgc:153215	67	51.613	ENSLOCG00000018344	rbm12b	64	51.613	Lepisosteus_oculatus
ENSPFOG00000017451	zgc:153215	68	47.959	ENSLAFG00000029949	RBM12B	51	47.959	Loxodonta_africana
ENSPFOG00000017451	zgc:153215	65	53.488	ENSMAMG00000011998	rbm12b	65	53.488	Mastacembelus_armatus
ENSPFOG00000017451	zgc:153215	84	62.136	ENSMAMG00000012038	zgc:153215	99	62.136	Mastacembelus_armatus
ENSPFOG00000017451	zgc:153215	99	42.331	ENSMZEG00005005435	zgc:153215	99	42.331	Maylandia_zebra
ENSPFOG00000017451	zgc:153215	77	41.429	ENSMZEG00005014845	rbm12b	72	41.429	Maylandia_zebra
ENSPFOG00000017451	zgc:153215	77	42.143	ENSMZEG00005015005	rbm12b	74	42.143	Maylandia_zebra
ENSPFOG00000017451	zgc:153215	68	50.000	ENSMGAG00000011985	RBM12B	83	50.000	Meleagris_gallopavo
ENSPFOG00000017451	zgc:153215	67	51.190	ENSMAUG00000021752	-	54	46.078	Mesocricetus_auratus
ENSPFOG00000017451	zgc:153215	67	51.190	ENSMOCG00000005603	-	52	51.190	Microtus_ochrogaster
ENSPFOG00000017451	zgc:153215	59	72.500	ENSMMOG00000003372	zgc:153215	89	68.421	Mola_mola
ENSPFOG00000017451	zgc:153215	65	50.000	ENSMMOG00000002404	rbm12b	69	50.000	Mola_mola
ENSPFOG00000017451	zgc:153215	66	52.381	ENSMODG00000007436	RBM12B	55	52.381	Monodelphis_domestica
ENSPFOG00000017451	zgc:153215	70	46.087	ENSMALG00000012059	rbm12b	73	46.087	Monopterus_albus
ENSPFOG00000017451	zgc:153215	74	56.198	ENSMALG00000001222	zgc:153215	97	56.198	Monopterus_albus
ENSPFOG00000017451	zgc:153215	67	51.190	ENSMUSG00000052137	Rbm12b2	52	51.190	Mus_musculus
ENSPFOG00000017451	zgc:153215	67	51.190	ENSMUSG00000046667	Rbm12b1	51	51.190	Mus_musculus
ENSPFOG00000017451	zgc:153215	67	51.190	MGP_SPRETEiJ_G0026766	-	51	51.190	Mus_spretus
ENSPFOG00000017451	zgc:153215	77	42.143	ENSNBRG00000015057	rbm12b	74	42.143	Neolamprologus_brichardi
ENSPFOG00000017451	zgc:153215	97	53.435	ENSNBRG00000013644	zgc:153215	99	53.435	Neolamprologus_brichardi
ENSPFOG00000017451	zgc:153215	77	42.857	ENSONIG00000020612	rbm12b	74	42.857	Oreochromis_niloticus
ENSPFOG00000017451	zgc:153215	95	54.198	ENSONIG00000006054	zgc:153215	100	53.846	Oreochromis_niloticus
ENSPFOG00000017451	zgc:153215	70	50.000	ENSOANG00000015735	-	62	50.000	Ornithorhynchus_anatinus
ENSPFOG00000017451	zgc:153215	73	40.909	ENSORLG00000008228	rbm12b	71	40.909	Oryzias_latipes
ENSPFOG00000017451	zgc:153215	73	40.909	ENSORLG00020013619	rbm12b	71	40.909	Oryzias_latipes_hni
ENSPFOG00000017451	zgc:153215	73	40.909	ENSORLG00015019999	rbm12b	71	40.909	Oryzias_latipes_hsok
ENSPFOG00000017451	zgc:153215	65	65.000	ENSOMEG00000004220	zgc:153215	92	58.763	Oryzias_melastigma
ENSPFOG00000017451	zgc:153215	70	44.828	ENSOMEG00000022523	rbm12b	71	44.828	Oryzias_melastigma
ENSPFOG00000017451	zgc:153215	75	48.352	ENSPKIG00000014851	zgc:153215	94	48.352	Paramormyrops_kingsleyae
ENSPFOG00000017451	zgc:153215	70	46.847	ENSPKIG00000018719	rbm12b	63	50.538	Paramormyrops_kingsleyae
ENSPFOG00000017451	zgc:153215	70	51.163	ENSPSIG00000001348	RBM12B	64	51.163	Pelodiscus_sinensis
ENSPFOG00000017451	zgc:153215	67	51.190	ENSPEMG00000008279	-	51	51.190	Peromyscus_maniculatus_bairdii
ENSPFOG00000017451	zgc:153215	66	52.381	ENSPCIG00000008556	RBM12B	56	52.381	Phascolarctos_cinereus
ENSPFOG00000017451	zgc:153215	80	80.100	ENSPLAG00000000232	zgc:153215	99	80.100	Poecilia_latipinna
ENSPFOG00000017451	zgc:153215	70	45.133	ENSPLAG00000018782	rbm12b	74	43.443	Poecilia_latipinna
ENSPFOG00000017451	zgc:153215	70	45.133	ENSPMEG00000011418	rbm12b	74	43.443	Poecilia_mexicana
ENSPFOG00000017451	zgc:153215	74	98.750	ENSPMEG00000016662	zgc:153215	99	98.750	Poecilia_mexicana
ENSPFOG00000017451	zgc:153215	79	94.792	ENSPREG00000018608	zgc:153215	99	94.792	Poecilia_reticulata
ENSPFOG00000017451	zgc:153215	66	51.163	ENSPREG00000020770	rbm12b	74	42.623	Poecilia_reticulata
ENSPFOG00000017451	zgc:153215	74	63.736	ENSPNYG00000018125	zgc:153215	97	63.736	Pundamilia_nyererei
ENSPFOG00000017451	zgc:153215	77	42.143	ENSPNYG00000016696	rbm12b	74	42.143	Pundamilia_nyererei
ENSPFOG00000017451	zgc:153215	68	50.538	ENSPNAG00000008126	rbm12b	63	49.485	Pygocentrus_nattereri
ENSPFOG00000017451	zgc:153215	83	37.838	ENSPNAG00000025628	zgc:153215	95	37.838	Pygocentrus_nattereri
ENSPFOG00000017451	zgc:153215	70	42.857	ENSRNOG00000016330	Rbm12b	53	42.857	Rattus_norvegicus
ENSPFOG00000017451	zgc:153215	70	42.857	ENSRNOG00000055292	LOC679087	60	42.857	Rattus_norvegicus
ENSPFOG00000017451	zgc:153215	66	51.190	ENSRBIG00000035046	RBM12B	54	51.190	Rhinopithecus_bieti
ENSPFOG00000017451	zgc:153215	66	52.381	ENSSHAG00000015335	RBM12B	56	52.381	Sarcophilus_harrisii
ENSPFOG00000017451	zgc:153215	74	46.903	ENSSFOG00015001584	rbm12b	70	46.903	Scleropages_formosus
ENSPFOG00000017451	zgc:153215	75	55.172	ENSSFOG00015009427	zgc:153215	96	55.172	Scleropages_formosus
ENSPFOG00000017451	zgc:153215	71	43.443	ENSSMAG00000019708	rbm12b	74	43.443	Scophthalmus_maximus
ENSPFOG00000017451	zgc:153215	71	61.538	ENSSMAG00000019013	zgc:153215	92	61.538	Scophthalmus_maximus
ENSPFOG00000017451	zgc:153215	67	70.000	ENSSDUG00000012545	zgc:153215	92	61.538	Seriola_dumerili
ENSPFOG00000017451	zgc:153215	67	50.000	ENSSDUG00000006856	rbm12b	67	50.000	Seriola_dumerili
ENSPFOG00000017451	zgc:153215	80	67.500	ENSSLDG00000013581	zgc:153215	94	63.158	Seriola_lalandi_dorsalis
ENSPFOG00000017451	zgc:153215	67	50.000	ENSSLDG00000016156	rbm12b	67	50.000	Seriola_lalandi_dorsalis
ENSPFOG00000017451	zgc:153215	66	48.810	ENSSARG00000011845	-	57	48.810	Sorex_araneus
ENSPFOG00000017451	zgc:153215	66	50.000	ENSSPUG00000016954	RBM12B	75	50.000	Sphenodon_punctatus
ENSPFOG00000017451	zgc:153215	72	44.800	ENSSPAG00000006774	rbm12b	74	44.800	Stegastes_partitus
ENSPFOG00000017451	zgc:153215	69	60.577	ENSSPAG00000023584	zgc:153215	95	62.376	Stegastes_partitus
ENSPFOG00000017451	zgc:153215	66	50.000	ENSTGUG00000011860	RBM12B	82	50.000	Taeniopygia_guttata
ENSPFOG00000017451	zgc:153215	67	50.000	ENSTRUG00000013738	rbm12b	74	39.437	Takifugu_rubripes
ENSPFOG00000017451	zgc:153215	57	63.158	ENSTNIG00000018374	-	98	55.660	Tetraodon_nigroviridis
ENSPFOG00000017451	zgc:153215	66	51.190	ENSTBEG00000000449	RBM12B	54	51.190	Tupaia_belangeri
ENSPFOG00000017451	zgc:153215	66	52.381	ENSXETG00000014694	rbm12b	99	52.381	Xenopus_tropicalis
ENSPFOG00000017451	zgc:153215	68	48.936	ENSXETG00000014696	rbm12b	68	48.936	Xenopus_tropicalis
ENSPFOG00000017451	zgc:153215	77	31.481	ENSXETG00000025920	-	97	31.481	Xenopus_tropicalis
ENSPFOG00000017451	zgc:153215	79	92.708	ENSXCOG00000019654	zgc:153215	98	92.708	Xiphophorus_couchianus
ENSPFOG00000017451	zgc:153215	58	51.163	ENSXCOG00000019735	-	99	42.623	Xiphophorus_couchianus
ENSPFOG00000017451	zgc:153215	66	51.163	ENSXMAG00000014213	rbm12b	74	42.623	Xiphophorus_maculatus
ENSPFOG00000017451	zgc:153215	84	72.727	ENSXMAG00000013169	-	97	72.727	Xiphophorus_maculatus