EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000017611 (Gene tree)
Gene ID: 103133738
Gene Symbol: prpf18
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 8387 bases
Position: chrKI519623.1:2623297-2631683
Accession: 103133738
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000017705	PRP4	PF08799.11	2.6e-13	1	1
ENSPFOP00000017705	Prp18	PF02840.15	6.3e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000017727	-	1904	XM_016668108	ENSPFOP00000017705	350 (aa)	XP_016523594	A0A087YI52

Gene Model

Click here to download ENSPFOG00000017611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000017611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000017611	prpf18	100	82.000	ENSG00000165630	PRPF18	100	82.000	Homo_sapiens
ENSPFOG00000017611	prpf18	100	92.286	ENSAPOG00000024177	prpf18	100	92.286	Acanthochromis_polyacanthus
ENSPFOG00000017611	prpf18	100	81.429	ENSAMEG00000013591	-	100	81.429	Ailuropoda_melanoleuca
ENSPFOG00000017611	prpf18	100	90.000	ENSACIG00000001186	prpf18	100	90.000	Amphilophus_citrinellus
ENSPFOG00000017611	prpf18	98	92.420	ENSAOCG00000006572	prpf18	94	92.398	Amphiprion_ocellaris
ENSPFOG00000017611	prpf18	100	92.571	ENSAPEG00000004564	prpf18	100	92.571	Amphiprion_percula
ENSPFOG00000017611	prpf18	100	90.000	ENSATEG00000000303	prpf18	100	90.000	Anabas_testudineus
ENSPFOG00000017611	prpf18	99	80.172	ENSAPLG00000003387	-	99	80.172	Anas_platyrhynchos
ENSPFOG00000017611	prpf18	100	81.143	ENSACAG00000000818	-	100	81.143	Anolis_carolinensis
ENSPFOG00000017611	prpf18	100	82.051	ENSANAG00000037445	-	100	82.051	Aotus_nancymaae
ENSPFOG00000017611	prpf18	100	89.429	ENSACLG00000026296	prpf18	100	89.429	Astatotilapia_calliptera
ENSPFOG00000017611	prpf18	100	88.857	ENSAMXG00000012848	prpf18	100	88.857	Astyanax_mexicanus
ENSPFOG00000017611	prpf18	100	81.481	ENSBTAG00000017244	PRPF18	100	81.481	Bos_taurus
ENSPFOG00000017611	prpf18	98	39.080	WBGene00009320	F32B6.3	97	39.080	Caenorhabditis_elegans
ENSPFOG00000017611	prpf18	100	82.051	ENSCJAG00000009432	-	100	82.051	Callithrix_jacchus
ENSPFOG00000017611	prpf18	100	81.429	ENSCAFG00000004735	-	100	81.429	Canis_familiaris
ENSPFOG00000017611	prpf18	100	81.429	ENSCAFG00020007712	-	100	81.429	Canis_lupus_dingo
ENSPFOG00000017611	prpf18	100	81.481	ENSCHIG00000000499	-	100	81.481	Capra_hircus
ENSPFOG00000017611	prpf18	100	81.766	ENSTSYG00000003517	-	100	81.766	Carlito_syrichta
ENSPFOG00000017611	prpf18	100	82.051	ENSCPOG00000021069	-	100	82.051	Cavia_porcellus
ENSPFOG00000017611	prpf18	100	82.051	ENSCCAG00000036822	-	100	82.051	Cebus_capucinus
ENSPFOG00000017611	prpf18	100	71.429	ENSCATG00000016633	-	100	71.429	Cercocebus_atys
ENSPFOG00000017611	prpf18	100	81.766	ENSCLAG00000011770	-	100	81.766	Chinchilla_lanigera
ENSPFOG00000017611	prpf18	100	82.051	ENSCSAG00000013109	-	100	82.051	Chlorocebus_sabaeus
ENSPFOG00000017611	prpf18	100	77.808	ENSCPBG00000003100	-	100	78.846	Chrysemys_picta_bellii
ENSPFOG00000017611	prpf18	99	55.331	ENSCING00000020481	-	97	55.331	Ciona_intestinalis
ENSPFOG00000017611	prpf18	99	54.885	ENSCSAVG00000010546	-	99	54.310	Ciona_savignyi
ENSPFOG00000017611	prpf18	100	82.051	ENSCANG00000034900	-	100	82.051	Colobus_angolensis_palliatus
ENSPFOG00000017611	prpf18	100	82.000	ENSCGRG00001023665	Prpf18	100	82.000	Cricetulus_griseus_chok1gshd
ENSPFOG00000017611	prpf18	100	82.000	ENSCGRG00000014690	Prpf18	100	82.000	Cricetulus_griseus_crigri
ENSPFOG00000017611	prpf18	100	88.000	ENSCSEG00000005536	prpf18	99	88.000	Cynoglossus_semilaevis
ENSPFOG00000017611	prpf18	100	96.571	ENSCVAG00000012401	prpf18	100	96.571	Cyprinodon_variegatus
ENSPFOG00000017611	prpf18	100	86.610	ENSDARG00000058306	prpf18	100	86.610	Danio_rerio
ENSPFOG00000017611	prpf18	100	81.429	ENSDNOG00000035607	-	100	81.429	Dasypus_novemcinctus
ENSPFOG00000017611	prpf18	100	81.143	ENSDORG00000000858	Prpf18	100	81.143	Dipodomys_ordii
ENSPFOG00000017611	prpf18	99	51.873	FBgn0027784	Prp18	98	52.161	Drosophila_melanogaster
ENSPFOG00000017611	prpf18	100	73.429	ENSETEG00000015060	-	100	73.429	Echinops_telfairi
ENSPFOG00000017611	prpf18	100	68.286	ENSEBUG00000016502	prpf18	99	67.429	Eptatretus_burgeri
ENSPFOG00000017611	prpf18	100	81.766	ENSEASG00005019373	-	100	81.766	Equus_asinus_asinus
ENSPFOG00000017611	prpf18	100	81.766	ENSECAG00000006997	PRPF18	100	81.766	Equus_caballus
ENSPFOG00000017611	prpf18	93	50.309	ENSEEUG00000001171	-	100	50.309	Erinaceus_europaeus
ENSPFOG00000017611	prpf18	100	86.080	ENSELUG00000022190	prpf18	100	86.080	Esox_lucius
ENSPFOG00000017611	prpf18	100	81.766	ENSFCAG00000004436	-	100	81.766	Felis_catus
ENSPFOG00000017611	prpf18	93	79.077	ENSFALG00000001912	-	97	79.385	Ficedula_albicollis
ENSPFOG00000017611	prpf18	94	83.537	ENSFDAG00000014026	-	100	83.537	Fukomys_damarensis
ENSPFOG00000017611	prpf18	99	56.734	ENSFDAG00000010713	-	97	56.734	Fukomys_damarensis
ENSPFOG00000017611	prpf18	78	98.168	ENSFHEG00000020125	prpf18	100	98.168	Fundulus_heteroclitus
ENSPFOG00000017611	prpf18	99	83.954	ENSGMOG00000012210	prpf18	99	83.954	Gadus_morhua
ENSPFOG00000017611	prpf18	100	81.143	ENSGALG00000043593	-	100	81.197	Gallus_gallus
ENSPFOG00000017611	prpf18	100	94.286	ENSGAFG00000006034	prpf18	100	94.286	Gambusia_affinis
ENSPFOG00000017611	prpf18	100	86.286	ENSGACG00000012232	prpf18	100	86.286	Gasterosteus_aculeatus
ENSPFOG00000017611	prpf18	100	81.714	ENSGAGG00000016878	-	100	81.714	Gopherus_agassizii
ENSPFOG00000017611	prpf18	93	80.923	ENSGGOG00000025188	-	96	80.923	Gorilla_gorilla
ENSPFOG00000017611	prpf18	100	91.429	ENSHBUG00000010264	prpf18	100	91.429	Haplochromis_burtoni
ENSPFOG00000017611	prpf18	100	81.429	ENSHGLG00000018534	PRPF18	100	81.429	Heterocephalus_glaber_female
ENSPFOG00000017611	prpf18	94	83.232	ENSHGLG00100012161	-	98	83.232	Heterocephalus_glaber_male
ENSPFOG00000017611	prpf18	100	92.000	ENSHCOG00000015987	prpf18	100	92.000	Hippocampus_comes
ENSPFOG00000017611	prpf18	100	82.436	ENSIPUG00000007432	prpf18	100	83.003	Ictalurus_punctatus
ENSPFOG00000017611	prpf18	100	81.766	ENSSTOG00000008735	-	100	81.766	Ictidomys_tridecemlineatus
ENSPFOG00000017611	prpf18	100	59.829	ENSJJAG00000015191	-	100	59.829	Jaculus_jaculus
ENSPFOG00000017611	prpf18	100	82.000	ENSJJAG00000024041	-	100	82.000	Jaculus_jaculus
ENSPFOG00000017611	prpf18	100	93.429	ENSKMAG00000012124	prpf18	100	93.429	Kryptolebias_marmoratus
ENSPFOG00000017611	prpf18	100	83.714	ENSLBEG00000028466	prpf18	99	84.928	Labrus_bergylta
ENSPFOG00000017611	prpf18	100	82.102	ENSLACG00000009885	prpf18	100	82.051	Latimeria_chalumnae
ENSPFOG00000017611	prpf18	100	86.040	ENSLOCG00000016736	prpf18	100	86.040	Lepisosteus_oculatus
ENSPFOG00000017611	prpf18	100	82.000	ENSLAFG00000007753	-	100	82.000	Loxodonta_africana
ENSPFOG00000017611	prpf18	100	82.051	ENSMFAG00000000540	-	100	82.051	Macaca_fascicularis
ENSPFOG00000017611	prpf18	100	82.051	ENSMMUG00000015071	PRPF18	93	90.066	Macaca_mulatta
ENSPFOG00000017611	prpf18	100	82.051	ENSMNEG00000024679	-	100	82.051	Macaca_nemestrina
ENSPFOG00000017611	prpf18	100	67.143	ENSMLEG00000031715	-	100	67.143	Mandrillus_leucophaeus
ENSPFOG00000017611	prpf18	100	90.571	ENSMAMG00000006610	prpf18	100	90.571	Mastacembelus_armatus
ENSPFOG00000017611	prpf18	100	91.429	ENSMZEG00005019392	prpf18	100	91.429	Maylandia_zebra
ENSPFOG00000017611	prpf18	100	81.143	ENSMGAG00000005023	-	100	81.143	Meleagris_gallopavo
ENSPFOG00000017611	prpf18	100	82.336	ENSMICG00000006572	-	100	82.336	Microcebus_murinus
ENSPFOG00000017611	prpf18	100	82.000	ENSMOCG00000021468	Prpf18	100	82.000	Microtus_ochrogaster
ENSPFOG00000017611	prpf18	100	90.286	ENSMMOG00000013012	prpf18	100	90.286	Mola_mola
ENSPFOG00000017611	prpf18	100	74.286	ENSMODG00000024043	-	100	74.286	Monodelphis_domestica
ENSPFOG00000017611	prpf18	96	78.402	ENSMODG00000016902	-	92	78.402	Monodelphis_domestica
ENSPFOG00000017611	prpf18	100	82.153	ENSMALG00000005486	prpf18	100	82.436	Monopterus_albus
ENSPFOG00000017611	prpf18	100	81.429	MGP_CAROLIEiJ_G0023143	Prpf18	100	94.521	Mus_caroli
ENSPFOG00000017611	prpf18	100	81.714	ENSMUSG00000039449	Prpf18	100	94.521	Mus_musculus
ENSPFOG00000017611	prpf18	100	81.714	MGP_PahariEiJ_G0019203	Prpf18	100	94.521	Mus_pahari
ENSPFOG00000017611	prpf18	100	81.714	MGP_SPRETEiJ_G0024061	Prpf18	100	94.521	Mus_spretus
ENSPFOG00000017611	prpf18	100	81.143	ENSMPUG00000000938	-	100	81.143	Mustela_putorius_furo
ENSPFOG00000017611	prpf18	100	81.143	ENSMLUG00000009200	-	100	81.143	Myotis_lucifugus
ENSPFOG00000017611	prpf18	100	82.000	ENSNGAG00000012500	-	100	82.000	Nannospalax_galili
ENSPFOG00000017611	prpf18	66	81.034	ENSNGAG00000023550	-	83	81.034	Nannospalax_galili
ENSPFOG00000017611	prpf18	100	89.143	ENSNBRG00000001778	prpf18	100	89.143	Neolamprologus_brichardi
ENSPFOG00000017611	prpf18	100	82.051	ENSNLEG00000012186	-	100	82.051	Nomascus_leucogenys
ENSPFOG00000017611	prpf18	74	71.042	ENSMEUG00000005032	-	75	71.042	Notamacropus_eugenii
ENSPFOG00000017611	prpf18	78	62.271	ENSOPRG00000002153	-	100	62.271	Ochotona_princeps
ENSPFOG00000017611	prpf18	100	81.143	ENSODEG00000003770	-	100	81.143	Octodon_degus
ENSPFOG00000017611	prpf18	98	88.921	ENSONIG00000014854	prpf18	96	88.921	Oreochromis_niloticus
ENSPFOG00000017611	prpf18	100	82.336	ENSOANG00000015404	-	100	82.336	Ornithorhynchus_anatinus
ENSPFOG00000017611	prpf18	100	81.714	ENSOCUG00000027756	-	96	82.388	Oryctolagus_cuniculus
ENSPFOG00000017611	prpf18	100	89.429	ENSORLG00000010293	prpf18	100	89.429	Oryzias_latipes
ENSPFOG00000017611	prpf18	100	89.429	ENSORLG00020001530	prpf18	100	89.429	Oryzias_latipes_hni
ENSPFOG00000017611	prpf18	100	89.143	ENSORLG00015013705	prpf18	100	89.143	Oryzias_latipes_hsok
ENSPFOG00000017611	prpf18	100	89.143	ENSOMEG00000009167	prpf18	100	89.143	Oryzias_melastigma
ENSPFOG00000017611	prpf18	100	81.143	ENSOGAG00000007294	-	100	81.143	Otolemur_garnettii
ENSPFOG00000017611	prpf18	100	81.481	ENSOARG00000006243	-	100	81.481	Ovis_aries
ENSPFOG00000017611	prpf18	100	82.051	ENSPPAG00000041959	-	100	82.051	Pan_paniscus
ENSPFOG00000017611	prpf18	100	81.429	ENSPPRG00000000107	-	100	81.429	Panthera_pardus
ENSPFOG00000017611	prpf18	100	81.429	ENSPTIG00000021094	-	100	81.429	Panthera_tigris_altaica
ENSPFOG00000017611	prpf18	100	82.051	ENSPTRG00000002306	PRPF18	100	82.051	Pan_troglodytes
ENSPFOG00000017611	prpf18	100	81.766	ENSPANG00000023346	-	100	81.766	Papio_anubis
ENSPFOG00000017611	prpf18	86	100.000	ENSPKIG00000014128	prpf18	96	85.470	Paramormyrops_kingsleyae
ENSPFOG00000017611	prpf18	100	81.143	ENSPSIG00000016064	-	100	81.143	Pelodiscus_sinensis
ENSPFOG00000017611	prpf18	100	81.766	ENSPMGG00000016486	prpf18	100	81.766	Periophthalmus_magnuspinnatus
ENSPFOG00000017611	prpf18	100	81.714	ENSPEMG00000013704	Prpf18	100	81.714	Peromyscus_maniculatus_bairdii
ENSPFOG00000017611	prpf18	100	73.429	ENSPMAG00000000204	prpf18	100	73.429	Petromyzon_marinus
ENSPFOG00000017611	prpf18	93	81.173	ENSPCIG00000012963	-	99	81.173	Phascolarctos_cinereus
ENSPFOG00000017611	prpf18	100	97.429	ENSPLAG00000000369	prpf18	100	97.429	Poecilia_latipinna
ENSPFOG00000017611	prpf18	100	99.714	ENSPMEG00000005183	prpf18	100	99.714	Poecilia_mexicana
ENSPFOG00000017611	prpf18	100	94.286	ENSPREG00000015232	prpf18	100	94.286	Poecilia_reticulata
ENSPFOG00000017611	prpf18	100	81.714	ENSPPYG00000002101	PRPF18	100	81.714	Pongo_abelii
ENSPFOG00000017611	prpf18	100	64.571	ENSPCAG00000010833	-	100	64.571	Procavia_capensis
ENSPFOG00000017611	prpf18	100	77.714	ENSPCOG00000013057	-	100	77.714	Propithecus_coquereli
ENSPFOG00000017611	prpf18	100	49.143	ENSPVAG00000002947	-	100	49.143	Pteropus_vampyrus
ENSPFOG00000017611	prpf18	100	91.143	ENSPNYG00000003554	prpf18	100	91.143	Pundamilia_nyererei
ENSPFOG00000017611	prpf18	100	86.325	ENSPNAG00000023151	prpf18	100	86.325	Pygocentrus_nattereri
ENSPFOG00000017611	prpf18	100	82.000	ENSRNOG00000018396	Prpf18	100	82.000	Rattus_norvegicus
ENSPFOG00000017611	prpf18	100	82.336	ENSRBIG00000028028	-	100	82.336	Rhinopithecus_bieti
ENSPFOG00000017611	prpf18	100	82.051	ENSRROG00000040695	-	100	82.051	Rhinopithecus_roxellana
ENSPFOG00000017611	prpf18	100	82.051	ENSSBOG00000034482	-	100	82.051	Saimiri_boliviensis_boliviensis
ENSPFOG00000017611	prpf18	100	82.000	ENSSHAG00000016463	-	100	82.000	Sarcophilus_harrisii
ENSPFOG00000017611	prpf18	100	68.000	ENSSHAG00000009669	-	100	68.000	Sarcophilus_harrisii
ENSPFOG00000017611	prpf18	98	84.348	ENSSFOG00015022118	prpf18	100	77.871	Scleropages_formosus
ENSPFOG00000017611	prpf18	67	48.498	ENSSFOG00015021154	-	89	48.498	Scleropages_formosus
ENSPFOG00000017611	prpf18	100	89.429	ENSSMAG00000005308	prpf18	100	89.429	Scophthalmus_maximus
ENSPFOG00000017611	prpf18	100	92.000	ENSSDUG00000015428	prpf18	100	92.000	Seriola_dumerili
ENSPFOG00000017611	prpf18	100	91.714	ENSSLDG00000023989	prpf18	100	91.714	Seriola_lalandi_dorsalis
ENSPFOG00000017611	prpf18	100	54.000	ENSSARG00000005307	-	100	54.000	Sorex_araneus
ENSPFOG00000017611	prpf18	100	81.714	ENSSPUG00000002619	-	100	81.714	Sphenodon_punctatus
ENSPFOG00000017611	prpf18	100	92.286	ENSSPAG00000019502	prpf18	100	92.286	Stegastes_partitus
ENSPFOG00000017611	prpf18	100	81.481	ENSSSCG00000026354	-	100	81.481	Sus_scrofa
ENSPFOG00000017611	prpf18	100	80.571	ENSTGUG00000002286	-	100	80.571	Taeniopygia_guttata
ENSPFOG00000017611	prpf18	100	87.429	ENSTRUG00000011278	prpf18	100	87.429	Takifugu_rubripes
ENSPFOG00000017611	prpf18	100	86.857	ENSTNIG00000000911	prpf18	100	86.857	Tetraodon_nigroviridis
ENSPFOG00000017611	prpf18	80	98.718	ENSTBEG00000013011	-	79	98.718	Tupaia_belangeri
ENSPFOG00000017611	prpf18	100	82.000	ENSTTRG00000011117	PRPF18	100	82.000	Tursiops_truncatus
ENSPFOG00000017611	prpf18	91	83.699	ENSUAMG00000001815	-	93	83.699	Ursus_americanus
ENSPFOG00000017611	prpf18	100	76.857	ENSUMAG00000012329	-	100	76.857	Ursus_maritimus
ENSPFOG00000017611	prpf18	100	76.000	ENSVPAG00000011486	-	100	76.000	Vicugna_pacos
ENSPFOG00000017611	prpf18	100	81.481	ENSVVUG00000005453	-	100	81.481	Vulpes_vulpes
ENSPFOG00000017611	prpf18	100	72.829	ENSXETG00000024057	prpf18	100	72.549	Xenopus_tropicalis
ENSPFOG00000017611	prpf18	100	94.886	ENSXCOG00000020414	prpf18	100	94.886	Xiphophorus_couchianus
ENSPFOG00000017611	prpf18	100	98.286	ENSXMAG00000004713	prpf18	91	98.286	Xiphophorus_maculatus