EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000017632 (Gene tree)
Gene ID: 103146871
Gene Symbol: casc3
Alias: -
Full Name: casc3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 15288 bases
Position: chrKI519780.1:825-16112
Accession: ZDB-GENE-040308-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000028478	Btz	PF09405.10	1.2e-21	1	1
ENSPFOP00000017778	Btz	PF09405.10	1.4e-21	1	1
ENSPFOP00000027348	Btz	PF09405.10	8.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000027043	-	4094	-	ENSPFOP00000027348	577 (aa)	-	A0A096M7F7
ENSPFOT00000017800	-	2154	-	ENSPFOP00000017778	718 (aa)	-	A0A087YIC5
ENSPFOT00000028745	-	1938	-	ENSPFOP00000028478	645 (aa)	-	A0A096MAN7

Gene Model

Click here to download ENSPFOG00000017632's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000017632's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000017632	casc3	100	45.964	ENSG00000108349	CASC3	90	48.844	Homo_sapiens
ENSPFOG00000017632	casc3	98	67.571	ENSAPOG00000008467	casc3	99	68.217	Acanthochromis_polyacanthus
ENSPFOG00000017632	casc3	100	46.970	ENSAMEG00000007764	CASC3	90	49.922	Ailuropoda_melanoleuca
ENSPFOG00000017632	casc3	100	67.117	ENSACIG00000000720	casc3	98	67.016	Amphilophus_citrinellus
ENSPFOG00000017632	casc3	87	80.887	ENSAOCG00000016676	casc3	99	68.750	Amphiprion_ocellaris
ENSPFOG00000017632	casc3	87	80.546	ENSAPEG00000006787	casc3	99	68.979	Amphiprion_percula
ENSPFOG00000017632	casc3	96	74.912	ENSATEG00000017196	casc3	99	69.677	Anabas_testudineus
ENSPFOG00000017632	casc3	93	45.889	ENSACAG00000002674	CASC3	88	45.524	Anolis_carolinensis
ENSPFOG00000017632	casc3	98	44.640	ENSANAG00000034820	-	90	45.984	Aotus_nancymaae
ENSPFOG00000017632	casc3	66	63.590	ENSANAG00000031954	-	85	62.637	Aotus_nancymaae
ENSPFOG00000017632	casc3	96	74.377	ENSACLG00000016198	casc3	99	70.481	Astatotilapia_calliptera
ENSPFOG00000017632	casc3	100	47.383	ENSBTAG00000006250	CASC3	90	49.769	Bos_taurus
ENSPFOG00000017632	casc3	92	48.397	ENSCJAG00000016032	CASC3	90	47.440	Callithrix_jacchus
ENSPFOG00000017632	casc3	100	47.441	ENSCAFG00000016141	CASC3	90	48.834	Canis_familiaris
ENSPFOG00000017632	casc3	100	47.099	ENSCAFG00020018882	CASC3	83	56.696	Canis_lupus_dingo
ENSPFOG00000017632	casc3	100	45.839	ENSCHIG00000006338	CASC3	90	48.841	Capra_hircus
ENSPFOG00000017632	casc3	90	48.661	ENSTSYG00000002975	CASC3	88	48.738	Carlito_syrichta
ENSPFOG00000017632	casc3	88	45.748	ENSCAPG00000010514	CASC3	99	49.359	Cavia_aperea
ENSPFOG00000017632	casc3	100	47.043	ENSCPOG00000015139	CASC3	90	49.767	Cavia_porcellus
ENSPFOG00000017632	casc3	92	47.910	ENSCCAG00000033620	CASC3	89	47.590	Cebus_capucinus
ENSPFOG00000017632	casc3	92	48.485	ENSCATG00000033593	CASC3	90	48.611	Cercocebus_atys
ENSPFOG00000017632	casc3	100	46.060	ENSCLAG00000013730	CASC3	89	48.407	Chinchilla_lanigera
ENSPFOG00000017632	casc3	100	46.289	ENSCSAG00000002777	CASC3	90	48.611	Chlorocebus_sabaeus
ENSPFOG00000017632	casc3	100	47.326	ENSCPBG00000004750	CASC3	95	47.424	Chrysemys_picta_bellii
ENSPFOG00000017632	casc3	92	49.014	ENSCANG00000008814	CASC3	90	48.392	Colobus_angolensis_palliatus
ENSPFOG00000017632	casc3	100	47.075	ENSCGRG00001014706	Casc3	90	49.150	Cricetulus_griseus_chok1gshd
ENSPFOG00000017632	casc3	100	46.154	ENSCGRG00000001952	Casc3	98	45.985	Cricetulus_griseus_crigri
ENSPFOG00000017632	casc3	96	67.077	ENSCSEG00000010047	casc3	79	65.409	Cynoglossus_semilaevis
ENSPFOG00000017632	casc3	98	77.188	ENSCVAG00000014935	casc3	99	77.188	Cyprinodon_variegatus
ENSPFOG00000017632	casc3	98	56.567	ENSDARG00000029911	casc3	77	68.512	Danio_rerio
ENSPFOG00000017632	casc3	100	47.368	ENSDNOG00000017249	CASC3	86	48.377	Dasypus_novemcinctus
ENSPFOG00000017632	casc3	89	45.383	ENSETEG00000013720	CASC3	89	46.451	Echinops_telfairi
ENSPFOG00000017632	casc3	99	33.509	ENSEBUG00000010654	casc3	81	41.767	Eptatretus_burgeri
ENSPFOG00000017632	casc3	92	49.080	ENSEASG00005002909	CASC3	85	56.696	Equus_asinus_asinus
ENSPFOG00000017632	casc3	92	49.616	ENSECAG00000019947	CASC3	78	49.377	Equus_caballus
ENSPFOG00000017632	casc3	65	42.308	ENSEEUG00000014253	CASC3	86	42.140	Erinaceus_europaeus
ENSPFOG00000017632	casc3	98	55.939	ENSELUG00000015093	casc3	78	66.246	Esox_lucius
ENSPFOG00000017632	casc3	100	46.832	ENSFCAG00000014998	CASC3	90	49.221	Felis_catus
ENSPFOG00000017632	casc3	90	46.708	ENSFALG00000000412	CASC3	98	46.697	Ficedula_albicollis
ENSPFOG00000017632	casc3	92	48.012	ENSFDAG00000020696	CASC3	96	47.511	Fukomys_damarensis
ENSPFOG00000017632	casc3	96	81.655	ENSFHEG00000015793	casc3	99	77.279	Fundulus_heteroclitus
ENSPFOG00000017632	casc3	92	49.150	ENSGALG00000031813	CASC3	97	47.504	Gallus_gallus
ENSPFOG00000017632	casc3	94	92.308	ENSGAFG00000017148	casc3	88	84.476	Gambusia_affinis
ENSPFOG00000017632	casc3	91	46.598	ENSGAGG00000008432	CASC3	94	47.352	Gopherus_agassizii
ENSPFOG00000017632	casc3	100	46.814	ENSGGOG00000005067	CASC3	90	48.690	Gorilla_gorilla
ENSPFOG00000017632	casc3	96	74.733	ENSHBUG00000013155	casc3	99	70.741	Haplochromis_burtoni
ENSPFOG00000017632	casc3	92	47.669	ENSHGLG00000012117	CASC3	56	60.920	Heterocephalus_glaber_female
ENSPFOG00000017632	casc3	90	47.256	ENSHGLG00100002268	CASC3	83	57.009	Heterocephalus_glaber_male
ENSPFOG00000017632	casc3	100	60.996	ENSHCOG00000002664	casc3	93	60.567	Hippocampus_comes
ENSPFOG00000017632	casc3	92	49.083	ENSSTOG00000006374	CASC3	90	48.848	Ictidomys_tridecemlineatus
ENSPFOG00000017632	casc3	92	48.377	ENSJJAG00000023525	Casc3	89	47.975	Jaculus_jaculus
ENSPFOG00000017632	casc3	96	77.739	ENSKMAG00000019507	casc3	98	72.653	Kryptolebias_marmoratus
ENSPFOG00000017632	casc3	96	71.603	ENSLBEG00000005435	casc3	77	72.196	Labrus_bergylta
ENSPFOG00000017632	casc3	100	42.134	ENSLACG00000013200	CASC3	88	43.721	Latimeria_chalumnae
ENSPFOG00000017632	casc3	77	66.383	ENSLOCG00000013518	casc3	64	66.383	Lepisosteus_oculatus
ENSPFOG00000017632	casc3	100	46.228	ENSLAFG00000000606	CASC3	90	47.393	Loxodonta_africana
ENSPFOG00000017632	casc3	92	48.485	ENSMFAG00000041496	CASC3	85	57.399	Macaca_fascicularis
ENSPFOG00000017632	casc3	92	48.485	ENSMMUG00000045187	CASC3	90	48.611	Macaca_mulatta
ENSPFOG00000017632	casc3	90	48.080	ENSMLEG00000029049	CASC3	98	48.423	Mandrillus_leucophaeus
ENSPFOG00000017632	casc3	96	71.479	ENSMAMG00000005235	casc3	95	67.336	Mastacembelus_armatus
ENSPFOG00000017632	casc3	96	74.377	ENSMZEG00005003815	casc3	99	70.481	Maylandia_zebra
ENSPFOG00000017632	casc3	94	41.897	ENSMGAG00000013247	CASC3	99	47.812	Meleagris_gallopavo
ENSPFOG00000017632	casc3	67	57.000	ENSMAUG00000006023	Casc3	75	60.920	Mesocricetus_auratus
ENSPFOG00000017632	casc3	89	47.634	ENSMICG00000003321	CASC3	89	48.594	Microcebus_murinus
ENSPFOG00000017632	casc3	100	46.657	ENSMOCG00000013644	Casc3	90	47.958	Microtus_ochrogaster
ENSPFOG00000017632	casc3	96	68.440	ENSMMOG00000014339	casc3	99	65.933	Mola_mola
ENSPFOG00000017632	casc3	57	86.667	ENSMODG00000013044	CASC3	82	47.859	Monodelphis_domestica
ENSPFOG00000017632	casc3	78	95.918	ENSMALG00000019771	casc3	73	91.525	Monopterus_albus
ENSPFOG00000017632	casc3	100	47.881	MGP_CAROLIEiJ_G0017099	Casc3	89	49.843	Mus_caroli
ENSPFOG00000017632	casc3	100	47.881	ENSMUSG00000078676	Casc3	89	49.843	Mus_musculus
ENSPFOG00000017632	casc3	92	49.452	MGP_SPRETEiJ_G0017943	Casc3	89	49.687	Mus_spretus
ENSPFOG00000017632	casc3	100	46.248	ENSMPUG00000014903	CASC3	90	47.879	Mustela_putorius_furo
ENSPFOG00000017632	casc3	100	45.994	ENSMLUG00000010520	CASC3	90	47.612	Myotis_lucifugus
ENSPFOG00000017632	casc3	99	47.042	ENSNGAG00000023121	Casc3	90	48.837	Nannospalax_galili
ENSPFOG00000017632	casc3	92	48.690	ENSNLEG00000001598	CASC3	90	49.074	Nomascus_leucogenys
ENSPFOG00000017632	casc3	93	40.031	ENSMEUG00000015662	CASC3	86	41.136	Notamacropus_eugenii
ENSPFOG00000017632	casc3	63	43.119	ENSOPRG00000007240	-	65	43.142	Ochotona_princeps
ENSPFOG00000017632	casc3	92	48.239	ENSODEG00000017858	CASC3	75	56.306	Octodon_degus
ENSPFOG00000017632	casc3	96	73.852	ENSONIG00000009337	casc3	99	74.169	Oreochromis_niloticus
ENSPFOG00000017632	casc3	82	36.696	ENSOANG00000003499	-	71	39.754	Ornithorhynchus_anatinus
ENSPFOG00000017632	casc3	79	61.224	ENSOCUG00000002954	CASC3	90	49.536	Oryctolagus_cuniculus
ENSPFOG00000017632	casc3	98	66.802	ENSORLG00000023125	casc3	99	66.846	Oryzias_latipes
ENSPFOG00000017632	casc3	100	46.492	ENSOGAG00000034486	CASC3	89	48.702	Otolemur_garnettii
ENSPFOG00000017632	casc3	100	46.866	ENSOARG00000013239	CASC3	90	49.691	Ovis_aries
ENSPFOG00000017632	casc3	100	45.964	ENSPPAG00000035069	CASC3	90	48.844	Pan_paniscus
ENSPFOG00000017632	casc3	100	46.694	ENSPPRG00000023670	CASC3	90	49.065	Panthera_pardus
ENSPFOG00000017632	casc3	92	48.992	ENSPTIG00000010891	CASC3	89	48.980	Panthera_tigris_altaica
ENSPFOG00000017632	casc3	92	48.333	ENSPANG00000021708	CASC3	90	48.457	Papio_anubis
ENSPFOG00000017632	casc3	98	52.750	ENSPKIG00000023186	casc3	94	52.368	Paramormyrops_kingsleyae
ENSPFOG00000017632	casc3	100	46.121	ENSPEMG00000009774	Casc3	90	48.527	Peromyscus_maniculatus_bairdii
ENSPFOG00000017632	casc3	58	88.636	ENSPCIG00000025678	CASC3	90	46.526	Phascolarctos_cinereus
ENSPFOG00000017632	casc3	96	99.640	ENSPLAG00000005268	casc3	99	89.791	Poecilia_latipinna
ENSPFOG00000017632	casc3	87	72.337	ENSPMEG00000010299	casc3	93	70.940	Poecilia_mexicana
ENSPFOG00000017632	casc3	96	96.937	ENSPREG00000011856	casc3	90	91.348	Poecilia_reticulata
ENSPFOG00000017632	casc3	92	48.765	ENSPPYG00000008467	CASC3	90	49.150	Pongo_abelii
ENSPFOG00000017632	casc3	89	47.161	ENSPCOG00000008183	CASC3	89	48.125	Propithecus_coquereli
ENSPFOG00000017632	casc3	100	46.961	ENSPVAG00000008556	CASC3	90	47.590	Pteropus_vampyrus
ENSPFOG00000017632	casc3	96	74.733	ENSPNYG00000011962	casc3	99	70.871	Pundamilia_nyererei
ENSPFOG00000017632	casc3	100	56.342	ENSPNAG00000015928	casc3	77	67.657	Pygocentrus_nattereri
ENSPFOG00000017632	casc3	99	46.522	ENSRNOG00000009716	Casc3	82	60.476	Rattus_norvegicus
ENSPFOG00000017632	casc3	92	48.710	ENSRBIG00000033289	CASC3	90	47.699	Rhinopithecus_bieti
ENSPFOG00000017632	casc3	92	48.710	ENSRROG00000022337	CASC3	90	48.545	Rhinopithecus_roxellana
ENSPFOG00000017632	casc3	89	46.942	ENSSBOG00000031406	CASC3	85	54.884	Saimiri_boliviensis_boliviensis
ENSPFOG00000017632	casc3	90	47.050	ENSSHAG00000013338	CASC3	62	58.621	Sarcophilus_harrisii
ENSPFOG00000017632	casc3	96	70.157	ENSSMAG00000016096	casc3	78	69.352	Scophthalmus_maximus
ENSPFOG00000017632	casc3	96	72.056	ENSSDUG00000016893	casc3	94	70.232	Seriola_dumerili
ENSPFOG00000017632	casc3	81	89.062	ENSSLDG00000020308	casc3	97	77.914	Seriola_lalandi_dorsalis
ENSPFOG00000017632	casc3	77	58.696	ENSSARG00000010378	CASC3	67	73.016	Sorex_araneus
ENSPFOG00000017632	casc3	96	73.462	ENSSPAG00000023008	casc3	99	67.263	Stegastes_partitus
ENSPFOG00000017632	casc3	79	61.224	ENSSSCG00000017477	CASC3	98	48.189	Sus_scrofa
ENSPFOG00000017632	casc3	95	41.034	ENSTGUG00000002300	CASC3	98	47.541	Taeniopygia_guttata
ENSPFOG00000017632	casc3	96	66.135	ENSTRUG00000000673	casc3	95	61.277	Takifugu_rubripes
ENSPFOG00000017632	casc3	100	65.318	ENSTNIG00000003208	casc3	63	76.136	Tetraodon_nigroviridis
ENSPFOG00000017632	casc3	78	57.426	ENSTTRG00000016896	CASC3	62	76.190	Tursiops_truncatus
ENSPFOG00000017632	casc3	100	46.217	ENSUAMG00000015116	CASC3	83	55.459	Ursus_americanus
ENSPFOG00000017632	casc3	90	48.270	ENSUMAG00000017697	CASC3	92	70.803	Ursus_maritimus
ENSPFOG00000017632	casc3	61	54.867	ENSVPAG00000000799	CASC3	60	57.522	Vicugna_pacos
ENSPFOG00000017632	casc3	100	47.303	ENSVVUG00000000997	CASC3	90	48.678	Vulpes_vulpes
ENSPFOG00000017632	casc3	91	45.242	ENSXETG00000024395	casc3	90	46.032	Xenopus_tropicalis
ENSPFOG00000017632	casc3	96	94.054	ENSXMAG00000013937	casc3	99	85.417	Xiphophorus_maculatus