EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000017719 (Gene tree)
Gene ID: 103140879
Gene Symbol: scrt1b
Alias: -
Full Name: transcriptional repressor scratch 1-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 13172 bases
Position: chrKI519687.1:2128726-2141897
Accession: 103140879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000017799	zf-C2H2	PF00096.26	1.6e-25	1	4
ENSPFOP00000017799	zf-C2H2	PF00096.26	1.6e-25	2	4
ENSPFOP00000017799	zf-C2H2	PF00096.26	1.6e-25	3	4
ENSPFOP00000017799	zf-C2H2	PF00096.26	1.6e-25	4	4
ENSPFOP00000017799	zf-met	PF12874.7	4.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000017821	-	6041	-	ENSPFOP00000017799	280 (aa)	XP_007556296	A0A087YIE6

Gene Model

Click here to download ENSPFOG00000017719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000017719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000017719	scrt1b	52	33.333	ENSPFOG00000011766	-	97	33.333
ENSPFOG00000017719	scrt1b	95	34.307	ENSPFOG00000015709	snai1a	98	34.307
ENSPFOG00000017719	scrt1b	83	34.351	ENSPFOG00000024254	-	57	34.351
ENSPFOG00000017719	scrt1b	83	54.545	ENSPFOG00000013875	znf341	54	54.545
ENSPFOG00000017719	scrt1b	62	32.044	ENSPFOG00000007465	-	91	32.418
ENSPFOG00000017719	scrt1b	54	37.681	ENSPFOG00000012948	-	50	37.681
ENSPFOG00000017719	scrt1b	86	37.273	ENSPFOG00000020112	-	94	37.273
ENSPFOG00000017719	scrt1b	96	65.049	ENSPFOG00000007738	scrt2	97	65.049
ENSPFOG00000017719	scrt1b	51	48.980	ENSPFOG00000008667	-	99	34.602
ENSPFOG00000017719	scrt1b	87	40.299	ENSPFOG00000022634	-	84	40.299
ENSPFOG00000017719	scrt1b	99	76.431	ENSPFOG00000005616	-	99	76.431
ENSPFOG00000017719	scrt1b	95	39.130	ENSPFOG00000014336	snai2	98	39.493
ENSPFOG00000017719	scrt1b	52	37.838	ENSPFOG00000004826	-	99	37.838
ENSPFOG00000017719	scrt1b	85	44.706	ENSPFOG00000007728	-	77	43.662
ENSPFOG00000017719	scrt1b	51	39.744	ENSPFOG00000001760	-	69	39.744
ENSPFOG00000017719	scrt1b	54	33.036	ENSPFOG00000024581	-	56	33.036
ENSPFOG00000017719	scrt1b	94	46.988	ENSPFOG00000023266	-	69	46.988
ENSPFOG00000017719	scrt1b	58	39.568	ENSPFOG00000010682	-	88	39.568
ENSPFOG00000017719	scrt1b	53	37.895	ENSPFOG00000021869	-	75	37.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000017719	scrt1b	100	97.857	ENSAPOG00000009279	scrt1b	100	97.857	Acanthochromis_polyacanthus
ENSPFOG00000017719	scrt1b	96	70.290	ENSAPOG00000003680	scrt2	96	70.290	Acanthochromis_polyacanthus
ENSPFOG00000017719	scrt1b	99	77.972	ENSAPOG00000015197	-	99	77.972	Acanthochromis_polyacanthus
ENSPFOG00000017719	scrt1b	99	76.333	ENSACIG00000006586	-	99	76.333	Amphilophus_citrinellus
ENSPFOG00000017719	scrt1b	96	58.804	ENSACIG00000001296	-	96	58.609	Amphilophus_citrinellus
ENSPFOG00000017719	scrt1b	96	69.203	ENSACIG00000012604	scrt2	96	69.203	Amphilophus_citrinellus
ENSPFOG00000017719	scrt1b	100	93.571	ENSACIG00000013613	scrt1b	100	93.571	Amphilophus_citrinellus
ENSPFOG00000017719	scrt1b	99	76.333	ENSAOCG00000023304	-	99	76.333	Amphiprion_ocellaris
ENSPFOG00000017719	scrt1b	100	97.857	ENSAOCG00000003910	scrt1b	100	97.857	Amphiprion_ocellaris
ENSPFOG00000017719	scrt1b	96	70.290	ENSAOCG00000021557	scrt2	96	70.290	Amphiprion_ocellaris
ENSPFOG00000017719	scrt1b	96	70.290	ENSAPEG00000022558	scrt2	96	70.290	Amphiprion_percula
ENSPFOG00000017719	scrt1b	99	76.333	ENSAPEG00000005677	-	99	76.333	Amphiprion_percula
ENSPFOG00000017719	scrt1b	100	98.214	ENSAPEG00000000869	scrt1b	100	98.214	Amphiprion_percula
ENSPFOG00000017719	scrt1b	96	65.049	ENSATEG00000023998	scrt2	97	65.049	Anabas_testudineus
ENSPFOG00000017719	scrt1b	100	96.429	ENSATEG00000002302	scrt1b	100	96.429	Anabas_testudineus
ENSPFOG00000017719	scrt1b	96	54.952	ENSATEG00000003195	-	97	54.952	Anabas_testudineus
ENSPFOG00000017719	scrt1b	99	77.273	ENSATEG00000011660	-	99	77.273	Anabas_testudineus
ENSPFOG00000017719	scrt1b	76	76.995	ENSACAG00000016109	SCRT2	95	76.995	Anolis_carolinensis
ENSPFOG00000017719	scrt1b	100	96.786	ENSACLG00000007162	scrt1b	100	96.786	Astatotilapia_calliptera
ENSPFOG00000017719	scrt1b	99	72.937	ENSACLG00000012046	-	99	72.937	Astatotilapia_calliptera
ENSPFOG00000017719	scrt1b	100	83.214	ENSAMXG00000038085	scrt1a	100	83.986	Astyanax_mexicanus
ENSPFOG00000017719	scrt1b	98	82.734	ENSAMXG00000042624	SCRT1	99	82.734	Astyanax_mexicanus
ENSPFOG00000017719	scrt1b	83	74.059	ENSAMXG00000034158	scrt2	87	74.059	Astyanax_mexicanus
ENSPFOG00000017719	scrt1b	58	62.963	WBGene00000468	ces-1	60	62.195	Caenorhabditis_elegans
ENSPFOG00000017719	scrt1b	99	83.571	ENSCPBG00000018899	SCRT1	99	83.571	Chrysemys_picta_bellii
ENSPFOG00000017719	scrt1b	86	61.355	ENSCPBG00000027613	SCRT2	100	61.355	Chrysemys_picta_bellii
ENSPFOG00000017719	scrt1b	100	95.714	ENSCSEG00000008596	scrt1b	100	95.714	Cynoglossus_semilaevis
ENSPFOG00000017719	scrt1b	96	66.997	ENSCSEG00000021542	scrt2	96	66.997	Cynoglossus_semilaevis
ENSPFOG00000017719	scrt1b	98	76.768	ENSCSEG00000014892	-	98	76.768	Cynoglossus_semilaevis
ENSPFOG00000017719	scrt1b	96	64.725	ENSCVAG00000021038	scrt2	97	64.725	Cyprinodon_variegatus
ENSPFOG00000017719	scrt1b	100	98.929	ENSCVAG00000009561	scrt1b	100	98.929	Cyprinodon_variegatus
ENSPFOG00000017719	scrt1b	99	76.333	ENSCVAG00000003190	-	99	76.333	Cyprinodon_variegatus
ENSPFOG00000017719	scrt1b	100	85.765	ENSDARG00000100821	scrt1a	100	85.765	Danio_rerio
ENSPFOG00000017719	scrt1b	100	86.477	ENSDARG00000040214	scrt1b	100	86.477	Danio_rerio
ENSPFOG00000017719	scrt1b	99	85.305	ENSELUG00000022228	scrt1a	99	85.305	Esox_lucius
ENSPFOG00000017719	scrt1b	99	88.129	ENSELUG00000005435	scrt1b	99	88.129	Esox_lucius
ENSPFOG00000017719	scrt1b	97	65.667	ENSELUG00000023883	scrt2	96	67.000	Esox_lucius
ENSPFOG00000017719	scrt1b	82	71.861	ENSFALG00000005718	SCRT2	96	71.861	Ficedula_albicollis
ENSPFOG00000017719	scrt1b	96	61.765	ENSFDAG00000008733	SCRT1	97	61.765	Fukomys_damarensis
ENSPFOG00000017719	scrt1b	99	76.667	ENSFHEG00000009794	-	99	76.667	Fundulus_heteroclitus
ENSPFOG00000017719	scrt1b	96	71.739	ENSFHEG00000005732	scrt2	96	71.739	Fundulus_heteroclitus
ENSPFOG00000017719	scrt1b	100	98.571	ENSFHEG00000014820	scrt1b	100	98.571	Fundulus_heteroclitus
ENSPFOG00000017719	scrt1b	99	92.473	ENSGMOG00000000629	scrt1b	100	92.473	Gadus_morhua
ENSPFOG00000017719	scrt1b	96	61.165	ENSGMOG00000019519	scrt2	95	61.165	Gadus_morhua
ENSPFOG00000017719	scrt1b	96	65.201	ENSGALG00000028912	SCRT2	97	65.201	Gallus_gallus
ENSPFOG00000017719	scrt1b	99	77.305	ENSGAFG00000009650	-	99	77.305	Gambusia_affinis
ENSPFOG00000017719	scrt1b	96	68.243	ENSGAFG00000003093	scrt2	96	68.243	Gambusia_affinis
ENSPFOG00000017719	scrt1b	100	100.000	ENSGAFG00000007636	scrt1b	100	100.000	Gambusia_affinis
ENSPFOG00000017719	scrt1b	99	73.649	ENSGACG00000004072	-	99	73.649	Gasterosteus_aculeatus
ENSPFOG00000017719	scrt1b	99	93.190	ENSGACG00000008982	scrt1b	99	93.190	Gasterosteus_aculeatus
ENSPFOG00000017719	scrt1b	99	84.532	ENSGAGG00000011736	SCRT1	100	84.532	Gopherus_agassizii
ENSPFOG00000017719	scrt1b	65	79.459	ENSGAGG00000020760	-	71	79.459	Gopherus_agassizii
ENSPFOG00000017719	scrt1b	96	64.706	ENSGAGG00000020761	SCRT2	96	64.706	Gopherus_agassizii
ENSPFOG00000017719	scrt1b	99	75.333	ENSHBUG00000019101	-	99	75.333	Haplochromis_burtoni
ENSPFOG00000017719	scrt1b	100	96.786	ENSHBUG00000016621	scrt1b	100	96.786	Haplochromis_burtoni
ENSPFOG00000017719	scrt1b	96	70.290	ENSHBUG00000012492	scrt2	96	70.290	Haplochromis_burtoni
ENSPFOG00000017719	scrt1b	96	66.327	ENSHCOG00000008116	scrt2	96	66.327	Hippocampus_comes
ENSPFOG00000017719	scrt1b	99	68.621	ENSHCOG00000016179	-	99	68.621	Hippocampus_comes
ENSPFOG00000017719	scrt1b	100	95.000	ENSHCOG00000016704	scrt1b	100	95.000	Hippocampus_comes
ENSPFOG00000017719	scrt1b	99	85.663	ENSIPUG00000004551	scrt1a	99	85.663	Ictalurus_punctatus
ENSPFOG00000017719	scrt1b	98	80.364	ENSIPUG00000005547	-	99	80.364	Ictalurus_punctatus
ENSPFOG00000017719	scrt1b	50	85.106	ENSSTOG00000032944	SCRT2	84	80.255	Ictidomys_tridecemlineatus
ENSPFOG00000017719	scrt1b	96	66.667	ENSKMAG00000018087	scrt2	97	66.667	Kryptolebias_marmoratus
ENSPFOG00000017719	scrt1b	99	74.667	ENSKMAG00000009489	-	99	76.333	Kryptolebias_marmoratus
ENSPFOG00000017719	scrt1b	100	99.286	ENSKMAG00000005484	scrt1b	100	99.286	Kryptolebias_marmoratus
ENSPFOG00000017719	scrt1b	96	64.516	ENSLBEG00000015419	scrt2	97	64.194	Labrus_bergylta
ENSPFOG00000017719	scrt1b	99	74.497	ENSLBEG00000023388	-	99	75.168	Labrus_bergylta
ENSPFOG00000017719	scrt1b	100	83.986	ENSLACG00000003588	SCRT1	99	83.986	Latimeria_chalumnae
ENSPFOG00000017719	scrt1b	96	55.016	ENSLOCG00000002246	scrt2	97	55.128	Lepisosteus_oculatus
ENSPFOG00000017719	scrt1b	100	87.900	ENSLOCG00000007573	scrt1b	100	87.900	Lepisosteus_oculatus
ENSPFOG00000017719	scrt1b	96	94.074	ENSMFAG00000035496	SCRT1	78	82.036	Macaca_fascicularis
ENSPFOG00000017719	scrt1b	100	97.500	ENSMAMG00000011698	scrt1b	100	97.500	Mastacembelus_armatus
ENSPFOG00000017719	scrt1b	96	65.049	ENSMAMG00000001291	scrt2	97	64.401	Mastacembelus_armatus
ENSPFOG00000017719	scrt1b	99	75.333	ENSMZEG00005026702	-	99	75.333	Maylandia_zebra
ENSPFOG00000017719	scrt1b	96	70.290	ENSMZEG00005026445	scrt2	96	70.290	Maylandia_zebra
ENSPFOG00000017719	scrt1b	100	96.786	ENSMZEG00005005627	scrt1b	100	96.786	Maylandia_zebra
ENSPFOG00000017719	scrt1b	83	70.130	ENSMGAG00000016579	SCRT2	96	70.435	Meleagris_gallopavo
ENSPFOG00000017719	scrt1b	99	76.333	ENSMMOG00000018345	-	99	76.333	Mola_mola
ENSPFOG00000017719	scrt1b	96	65.359	ENSMMOG00000009272	scrt2	97	65.359	Mola_mola
ENSPFOG00000017719	scrt1b	100	95.357	ENSMMOG00000003327	scrt1b	100	95.357	Mola_mola
ENSPFOG00000017719	scrt1b	100	97.500	ENSMALG00000012704	scrt1b	100	97.500	Monopterus_albus
ENSPFOG00000017719	scrt1b	96	69.176	ENSMALG00000013656	scrt2	96	69.176	Monopterus_albus
ENSPFOG00000017719	scrt1b	64	69.022	ENSNGAG00000020815	Scrt2	93	67.526	Nannospalax_galili
ENSPFOG00000017719	scrt1b	100	91.429	ENSNBRG00000013983	scrt1b	100	91.429	Neolamprologus_brichardi
ENSPFOG00000017719	scrt1b	96	69.928	ENSNBRG00000007221	scrt2	96	69.928	Neolamprologus_brichardi
ENSPFOG00000017719	scrt1b	99	75.667	ENSNBRG00000014882	-	99	75.667	Neolamprologus_brichardi
ENSPFOG00000017719	scrt1b	96	62.094	ENSONIG00000003152	-	96	62.094	Oreochromis_niloticus
ENSPFOG00000017719	scrt1b	96	72.549	ENSONIG00000019809	-	99	72.549	Oreochromis_niloticus
ENSPFOG00000017719	scrt1b	96	64.725	ENSONIG00000016758	scrt2	97	64.725	Oreochromis_niloticus
ENSPFOG00000017719	scrt1b	100	96.786	ENSONIG00000006007	scrt1b	100	96.786	Oreochromis_niloticus
ENSPFOG00000017719	scrt1b	100	96.786	ENSORLG00000025651	scrt1b	100	96.786	Oryzias_latipes
ENSPFOG00000017719	scrt1b	99	74.086	ENSORLG00000022825	-	99	74.086	Oryzias_latipes
ENSPFOG00000017719	scrt1b	96	64.725	ENSORLG00000024051	scrt2	97	64.725	Oryzias_latipes
ENSPFOG00000017719	scrt1b	96	64.725	ENSORLG00020011478	scrt2	97	64.725	Oryzias_latipes_hni
ENSPFOG00000017719	scrt1b	100	96.786	ENSORLG00020012967	scrt1b	100	96.786	Oryzias_latipes_hni
ENSPFOG00000017719	scrt1b	96	64.725	ENSORLG00015005524	scrt2	97	64.725	Oryzias_latipes_hsok
ENSPFOG00000017719	scrt1b	100	96.786	ENSORLG00015019165	scrt1b	100	96.786	Oryzias_latipes_hsok
ENSPFOG00000017719	scrt1b	99	75.415	ENSORLG00015010104	-	99	75.415	Oryzias_latipes_hsok
ENSPFOG00000017719	scrt1b	100	96.786	ENSOMEG00000003925	scrt1b	100	96.786	Oryzias_melastigma
ENSPFOG00000017719	scrt1b	99	75.920	ENSOMEG00000000286	-	99	75.920	Oryzias_melastigma
ENSPFOG00000017719	scrt1b	96	65.049	ENSOMEG00000002661	scrt2	97	65.049	Oryzias_melastigma
ENSPFOG00000017719	scrt1b	100	86.786	ENSPKIG00000022303	SCRT1	100	86.786	Paramormyrops_kingsleyae
ENSPFOG00000017719	scrt1b	100	85.409	ENSPKIG00000020085	scrt1a	100	85.409	Paramormyrops_kingsleyae
ENSPFOG00000017719	scrt1b	96	70.758	ENSPMGG00000016561	scrt2	96	70.758	Periophthalmus_magnuspinnatus
ENSPFOG00000017719	scrt1b	99	74.576	ENSPMGG00000021402	-	99	74.576	Periophthalmus_magnuspinnatus
ENSPFOG00000017719	scrt1b	100	91.786	ENSPMGG00000002260	scrt1b	100	91.786	Periophthalmus_magnuspinnatus
ENSPFOG00000017719	scrt1b	100	100.000	ENSPLAG00000009876	scrt1b	100	100.000	Poecilia_latipinna
ENSPFOG00000017719	scrt1b	99	76.431	ENSPLAG00000011718	-	99	76.431	Poecilia_latipinna
ENSPFOG00000017719	scrt1b	96	71.841	ENSPLAG00000005765	scrt2	96	71.841	Poecilia_latipinna
ENSPFOG00000017719	scrt1b	99	76.431	ENSPMEG00000011706	-	99	76.431	Poecilia_mexicana
ENSPFOG00000017719	scrt1b	100	100.000	ENSPMEG00000013274	scrt1b	100	100.000	Poecilia_mexicana
ENSPFOG00000017719	scrt1b	96	71.841	ENSPMEG00000001538	scrt2	96	71.841	Poecilia_mexicana
ENSPFOG00000017719	scrt1b	96	65.049	ENSPREG00000001147	scrt2	97	65.049	Poecilia_reticulata
ENSPFOG00000017719	scrt1b	99	75.758	ENSPREG00000012166	-	99	75.758	Poecilia_reticulata
ENSPFOG00000017719	scrt1b	100	100.000	ENSPREG00000018985	scrt1b	100	100.000	Poecilia_reticulata
ENSPFOG00000017719	scrt1b	99	75.333	ENSPNYG00000008865	-	99	75.333	Pundamilia_nyererei
ENSPFOG00000017719	scrt1b	96	70.290	ENSPNYG00000013109	scrt2	96	70.290	Pundamilia_nyererei
ENSPFOG00000017719	scrt1b	100	96.786	ENSPNYG00000017733	scrt1b	100	96.786	Pundamilia_nyererei
ENSPFOG00000017719	scrt1b	98	84.116	ENSPNAG00000027880	-	99	84.116	Pygocentrus_nattereri
ENSPFOG00000017719	scrt1b	100	85.053	ENSPNAG00000017415	scrt1a	100	85.053	Pygocentrus_nattereri
ENSPFOG00000017719	scrt1b	100	86.121	ENSSFOG00015001195	SCRT1	100	86.121	Scleropages_formosus
ENSPFOG00000017719	scrt1b	99	96.416	ENSSMAG00000019207	scrt1b	99	96.416	Scophthalmus_maximus
ENSPFOG00000017719	scrt1b	99	73.841	ENSSMAG00000005122	-	99	73.841	Scophthalmus_maximus
ENSPFOG00000017719	scrt1b	99	77.000	ENSSDUG00000013215	-	99	77.000	Seriola_dumerili
ENSPFOG00000017719	scrt1b	98	65.772	ENSSDUG00000001637	scrt2	96	66.443	Seriola_dumerili
ENSPFOG00000017719	scrt1b	100	97.857	ENSSDUG00000007752	scrt1b	100	97.857	Seriola_dumerili
ENSPFOG00000017719	scrt1b	100	97.857	ENSSLDG00000017166	scrt1b	100	97.857	Seriola_lalandi_dorsalis
ENSPFOG00000017719	scrt1b	96	64.401	ENSSLDG00000013565	scrt2	97	65.049	Seriola_lalandi_dorsalis
ENSPFOG00000017719	scrt1b	99	77.000	ENSSLDG00000016454	-	99	77.000	Seriola_lalandi_dorsalis
ENSPFOG00000017719	scrt1b	96	66.052	ENSSPUG00000018637	SCRT2	97	66.052	Sphenodon_punctatus
ENSPFOG00000017719	scrt1b	96	70.652	ENSSPAG00000014018	scrt2	96	70.652	Stegastes_partitus
ENSPFOG00000017719	scrt1b	99	75.000	ENSSPAG00000006788	-	99	76.667	Stegastes_partitus
ENSPFOG00000017719	scrt1b	100	97.857	ENSSPAG00000002200	scrt1b	100	97.857	Stegastes_partitus
ENSPFOG00000017719	scrt1b	82	71.739	ENSTGUG00000006801	SCRT2	99	71.739	Taeniopygia_guttata
ENSPFOG00000017719	scrt1b	98	94.909	ENSTRUG00000011637	scrt1b	99	94.909	Takifugu_rubripes
ENSPFOG00000017719	scrt1b	86	77.500	ENSTRUG00000019558	-	81	77.500	Takifugu_rubripes
ENSPFOG00000017719	scrt1b	96	68.041	ENSTRUG00000007620	scrt2	96	68.041	Takifugu_rubripes
ENSPFOG00000017719	scrt1b	99	75.168	ENSTRUG00000012719	-	99	75.168	Takifugu_rubripes
ENSPFOG00000017719	scrt1b	100	94.643	ENSTNIG00000018384	scrt1b	100	94.643	Tetraodon_nigroviridis
ENSPFOG00000017719	scrt1b	96	70.609	ENSTNIG00000012473	scrt2	97	70.609	Tetraodon_nigroviridis
ENSPFOG00000017719	scrt1b	100	99.643	ENSXCOG00000019675	scrt1b	100	99.643	Xiphophorus_couchianus
ENSPFOG00000017719	scrt1b	99	75.887	ENSXCOG00000019861	-	99	75.887	Xiphophorus_couchianus
ENSPFOG00000017719	scrt1b	96	68.581	ENSXCOG00000014367	scrt2	96	68.581	Xiphophorus_couchianus
ENSPFOG00000017719	scrt1b	100	99.643	ENSXMAG00000027885	scrt1b	100	99.643	Xiphophorus_maculatus
ENSPFOG00000017719	scrt1b	96	65.372	ENSXMAG00000028567	scrt2	97	65.372	Xiphophorus_maculatus
ENSPFOG00000017719	scrt1b	99	75.758	ENSXMAG00000015353	-	99	75.758	Xiphophorus_maculatus