EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000017804 (Gene tree)
Gene ID: 103149899
Gene Symbol: rif1
Alias: -
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 23640 bases
Position: chrKI519849.1:9741-33380
Accession: 103149899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000018027	Rif1_N	PF12231.8	2.3e-82	1	1
ENSPFOP00000021508	Rif1_N	PF12231.8	4.3e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000031015	-	7280	-	ENSPFOP00000021508	2306 (aa)	-	A0A096LQR7
ENSPFOT00000018049	-	7947	XM_007569264	ENSPFOP00000018027	2356 (aa)	XP_007569326	A0A087YJ24

Gene Model

Click here to download ENSPFOG00000017804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000017804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000017804	rif1	92	100.000	ENSPFOG00000000554	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000017804	rif1	65	51.325	ENSG00000080345	RIF1	96	55.048	Homo_sapiens
ENSPFOG00000017804	rif1	99	63.133	ENSAPOG00000011073	rif1	99	54.596	Acanthochromis_polyacanthus
ENSPFOG00000017804	rif1	67	51.807	ENSAMEG00000008461	RIF1	63	51.727	Ailuropoda_melanoleuca
ENSPFOG00000017804	rif1	92	72.782	ENSACIG00000017765	rif1	63	70.472	Amphilophus_citrinellus
ENSPFOG00000017804	rif1	99	65.915	ENSAOCG00000017231	rif1	96	67.669	Amphiprion_ocellaris
ENSPFOG00000017804	rif1	98	75.123	ENSAPEG00000013228	rif1	100	76.263	Amphiprion_percula
ENSPFOG00000017804	rif1	96	73.171	ENSATEG00000022887	rif1	99	73.171	Anabas_testudineus
ENSPFOG00000017804	rif1	51	51.846	ENSAPLG00000007092	RIF1	53	52.389	Anas_platyrhynchos
ENSPFOG00000017804	rif1	53	49.683	ENSACAG00000003714	RIF1	68	49.445	Anolis_carolinensis
ENSPFOG00000017804	rif1	68	51.888	ENSANAG00000024840	RIF1	64	51.688	Aotus_nancymaae
ENSPFOG00000017804	rif1	90	54.282	ENSAMXG00000010910	rif1	76	61.850	Astyanax_mexicanus
ENSPFOG00000017804	rif1	69	51.111	ENSCJAG00000003138	RIF1	66	51.069	Callithrix_jacchus
ENSPFOG00000017804	rif1	70	51.024	ENSCAFG00000005670	RIF1	64	50.945	Canis_familiaris
ENSPFOG00000017804	rif1	70	51.024	ENSCAFG00020016401	RIF1	67	50.945	Canis_lupus_dingo
ENSPFOG00000017804	rif1	70	50.948	ENSCHIG00000020327	RIF1	67	50.869	Capra_hircus
ENSPFOG00000017804	rif1	66	49.480	ENSTSYG00000008861	RIF1	62	49.400	Carlito_syrichta
ENSPFOG00000017804	rif1	56	40.964	ENSCAPG00000008957	RIF1	80	38.302	Cavia_aperea
ENSPFOG00000017804	rif1	66	49.480	ENSCCAG00000024760	RIF1	62	49.359	Cebus_capucinus
ENSPFOG00000017804	rif1	70	51.486	ENSCATG00000033353	RIF1	65	51.486	Cercocebus_atys
ENSPFOG00000017804	rif1	67	51.748	ENSCLAG00000001517	RIF1	61	51.661	Chinchilla_lanigera
ENSPFOG00000017804	rif1	70	51.647	ENSCSAG00000016089	RIF1	65	51.647	Chlorocebus_sabaeus
ENSPFOG00000017804	rif1	63	50.667	ENSCHOG00000007187	RIF1	60	50.667	Choloepus_hoffmanni
ENSPFOG00000017804	rif1	73	51.807	ENSCPBG00000025885	RIF1	72	51.727	Chrysemys_picta_bellii
ENSPFOG00000017804	rif1	69	49.761	ENSCANG00000028962	RIF1	62	53.982	Colobus_angolensis_palliatus
ENSPFOG00000017804	rif1	69	49.518	ENSCGRG00001024589	Rif1	67	49.599	Cricetulus_griseus_chok1gshd
ENSPFOG00000017804	rif1	67	50.896	ENSCGRG00000010713	Rif1	67	51.106	Cricetulus_griseus_crigri
ENSPFOG00000017804	rif1	97	56.689	ENSCSEG00000003945	rif1	99	56.998	Cynoglossus_semilaevis
ENSPFOG00000017804	rif1	99	67.804	ENSCVAG00000022479	rif1	100	67.928	Cyprinodon_variegatus
ENSPFOG00000017804	rif1	74	49.922	ENSDNOG00000011194	RIF1	67	50.000	Dasypus_novemcinctus
ENSPFOG00000017804	rif1	61	54.867	ENSETEG00000012421	RIF1	59	54.867	Echinops_telfairi
ENSPFOG00000017804	rif1	57	68.197	ENSEASG00005023434	RIF1	56	68.197	Equus_asinus_asinus
ENSPFOG00000017804	rif1	66	52.308	ENSECAG00000012679	RIF1	62	52.227	Equus_caballus
ENSPFOG00000017804	rif1	75	61.361	ENSELUG00000006826	rif1	64	61.972	Esox_lucius
ENSPFOG00000017804	rif1	70	51.220	ENSFCAG00000029742	RIF1	66	51.799	Felis_catus
ENSPFOG00000017804	rif1	67	51.305	ENSFDAG00000006538	RIF1	63	51.371	Fukomys_damarensis
ENSPFOG00000017804	rif1	99	73.258	ENSFHEG00000013721	rif1	99	73.342	Fundulus_heteroclitus
ENSPFOG00000017804	rif1	70	59.920	ENSGMOG00000003517	rif1	100	60.331	Gadus_morhua
ENSPFOG00000017804	rif1	51	48.594	ENSGALG00000012484	RIF1	56	49.034	Gallus_gallus
ENSPFOG00000017804	rif1	96	92.714	ENSGAFG00000017196	rif1	99	92.714	Gambusia_affinis
ENSPFOG00000017804	rif1	81	46.631	ENSGAGG00000012595	RIF1	72	49.633	Gopherus_agassizii
ENSPFOG00000017804	rif1	55	58.739	ENSGGOG00000040178	RIF1	55	59.270	Gorilla_gorilla
ENSPFOG00000017804	rif1	99	63.719	ENSHBUG00000007125	rif1	100	63.905	Haplochromis_burtoni
ENSPFOG00000017804	rif1	65	51.347	ENSHGLG00100009807	RIF1	61	51.412	Heterocephalus_glaber_male
ENSPFOG00000017804	rif1	99	64.328	ENSHCOG00000015943	rif1	90	64.418	Hippocampus_comes
ENSPFOG00000017804	rif1	78	57.834	ENSIPUG00000021703	rif1	79	57.031	Ictalurus_punctatus
ENSPFOG00000017804	rif1	70	51.413	ENSSTOG00000020712	RIF1	63	51.453	Ictidomys_tridecemlineatus
ENSPFOG00000017804	rif1	52	49.439	ENSJJAG00000023000	Rif1	51	49.439	Jaculus_jaculus
ENSPFOG00000017804	rif1	99	62.900	ENSKMAG00000002852	rif1	99	62.988	Kryptolebias_marmoratus
ENSPFOG00000017804	rif1	98	66.510	ENSLBEG00000023196	rif1	89	67.106	Labrus_bergylta
ENSPFOG00000017804	rif1	82	58.859	ENSLOCG00000002657	rif1	83	59.760	Lepisosteus_oculatus
ENSPFOG00000017804	rif1	69	51.174	ENSLAFG00000009796	RIF1	66	51.174	Loxodonta_africana
ENSPFOG00000017804	rif1	70	51.566	ENSMFAG00000032233	RIF1	65	51.566	Macaca_fascicularis
ENSPFOG00000017804	rif1	69	51.566	ENSMMUG00000008611	RIF1	65	51.566	Macaca_mulatta
ENSPFOG00000017804	rif1	70	51.566	ENSMNEG00000031616	RIF1	65	51.566	Macaca_nemestrina
ENSPFOG00000017804	rif1	70	51.486	ENSMLEG00000042945	RIF1	65	51.486	Mandrillus_leucophaeus
ENSPFOG00000017804	rif1	68	69.279	ENSMAMG00000001745	rif1	66	70.064	Mastacembelus_armatus
ENSPFOG00000017804	rif1	96	74.109	ENSMZEG00005020920	rif1	99	74.484	Maylandia_zebra
ENSPFOG00000017804	rif1	71	51.037	ENSMGAG00000012732	RIF1	76	50.957	Meleagris_gallopavo
ENSPFOG00000017804	rif1	75	50.778	ENSMICG00000046127	RIF1	63	51.206	Microcebus_murinus
ENSPFOG00000017804	rif1	66	49.393	ENSMOCG00000009381	Rif1	64	49.393	Microtus_ochrogaster
ENSPFOG00000017804	rif1	99	54.784	ENSMMOG00000006519	rif1	99	54.582	Mola_mola
ENSPFOG00000017804	rif1	70	50.037	ENSMODG00000003703	RIF1	69	50.037	Monodelphis_domestica
ENSPFOG00000017804	rif1	98	63.573	ENSMALG00000016759	rif1	99	63.382	Monopterus_albus
ENSPFOG00000017804	rif1	52	50.924	MGP_CAROLIEiJ_G0023555	Rif1	64	51.165	Mus_caroli
ENSPFOG00000017804	rif1	67	51.237	ENSMUSG00000036202	Rif1	64	51.397	Mus_musculus
ENSPFOG00000017804	rif1	53	47.327	MGP_PahariEiJ_G0025006	Rif1	64	47.877	Mus_pahari
ENSPFOG00000017804	rif1	52	51.724	MGP_SPRETEiJ_G0024476	Rif1	64	52.125	Mus_spretus
ENSPFOG00000017804	rif1	67	51.424	ENSMPUG00000000371	RIF1	63	51.266	Mustela_putorius_furo
ENSPFOG00000017804	rif1	55	48.156	ENSMLUG00000003376	RIF1	59	48.056	Myotis_lucifugus
ENSPFOG00000017804	rif1	53	51.270	ENSNGAG00000009268	Rif1	68	51.469	Nannospalax_galili
ENSPFOG00000017804	rif1	86	72.390	ENSNBRG00000014257	rif1	100	61.837	Neolamprologus_brichardi
ENSPFOG00000017804	rif1	68	50.833	ENSNLEG00000010955	RIF1	62	50.991	Nomascus_leucogenys
ENSPFOG00000017804	rif1	54	64.286	ENSMEUG00000007601	-	53	64.286	Notamacropus_eugenii
ENSPFOG00000017804	rif1	72	47.464	ENSODEG00000003950	RIF1	69	47.488	Octodon_degus
ENSPFOG00000017804	rif1	99	63.599	ENSONIG00000013657	rif1	100	64.511	Oreochromis_niloticus
ENSPFOG00000017804	rif1	57	55.535	ENSOANG00000006078	-	55	56.030	Ornithorhynchus_anatinus
ENSPFOG00000017804	rif1	53	50.710	ENSOCUG00000017435	RIF1	51	51.020	Oryctolagus_cuniculus
ENSPFOG00000017804	rif1	99	57.329	ENSORLG00020001302	rif1	99	56.131	Oryzias_latipes_hni
ENSPFOG00000017804	rif1	99	57.363	ENSORLG00015000009	rif1	99	56.910	Oryzias_latipes_hsok
ENSPFOG00000017804	rif1	99	56.838	ENSOMEG00000021513	rif1	63	66.508	Oryzias_melastigma
ENSPFOG00000017804	rif1	70	51.603	ENSOGAG00000006141	RIF1	63	51.603	Otolemur_garnettii
ENSPFOG00000017804	rif1	70	51.420	ENSOARG00000008930	RIF1	67	51.341	Ovis_aries
ENSPFOG00000017804	rif1	66	51.241	ENSPPAG00000023754	RIF1	62	51.435	Pan_paniscus
ENSPFOG00000017804	rif1	69	51.677	ENSPPRG00000003618	RIF1	65	51.479	Panthera_pardus
ENSPFOG00000017804	rif1	69	51.677	ENSPTIG00000020652	RIF1	65	51.479	Panthera_tigris_altaica
ENSPFOG00000017804	rif1	65	51.406	ENSPTRG00000012534	RIF1	62	51.515	Pan_troglodytes
ENSPFOG00000017804	rif1	70	51.566	ENSPANG00000008525	RIF1	65	51.566	Papio_anubis
ENSPFOG00000017804	rif1	63	55.423	ENSPKIG00000004267	rif1	65	55.548	Paramormyrops_kingsleyae
ENSPFOG00000017804	rif1	80	61.585	ENSPMGG00000016141	rif1	94	60.256	Periophthalmus_magnuspinnatus
ENSPFOG00000017804	rif1	68	50.320	ENSPEMG00000000446	Rif1	65	50.199	Peromyscus_maniculatus_bairdii
ENSPFOG00000017804	rif1	53	51.825	ENSPCIG00000009185	RIF1	64	52.054	Phascolarctos_cinereus
ENSPFOG00000017804	rif1	99	94.348	ENSPLAG00000017945	rif1	99	94.348	Poecilia_latipinna
ENSPFOG00000017804	rif1	90	98.910	ENSPMEG00000006897	-	100	98.910	Poecilia_mexicana
ENSPFOG00000017804	rif1	100	92.188	ENSPREG00000018052	rif1	100	92.188	Poecilia_reticulata
ENSPFOG00000017804	rif1	68	51.566	ENSPPYG00000012846	RIF1	62	51.435	Pongo_abelii
ENSPFOG00000017804	rif1	65	52.293	ENSPCOG00000027888	RIF1	62	52.212	Propithecus_coquereli
ENSPFOG00000017804	rif1	58	60.327	ENSPVAG00000014276	RIF1	57	60.327	Pteropus_vampyrus
ENSPFOG00000017804	rif1	96	74.765	ENSPNYG00000012940	rif1	99	74.765	Pundamilia_nyererei
ENSPFOG00000017804	rif1	88	63.333	ENSPNAG00000016685	rif1	80	59.885	Pygocentrus_nattereri
ENSPFOG00000017804	rif1	67	49.476	ENSRNOG00000054901	Rif1	64	49.281	Rattus_norvegicus
ENSPFOG00000017804	rif1	69	50.557	ENSRBIG00000003704	RIF1	63	50.512	Rhinopithecus_bieti
ENSPFOG00000017804	rif1	67	51.535	ENSRROG00000028206	RIF1	62	51.530	Rhinopithecus_roxellana
ENSPFOG00000017804	rif1	66	55.556	ENSSBOG00000029530	RIF1	64	54.255	Saimiri_boliviensis_boliviensis
ENSPFOG00000017804	rif1	67	50.752	ENSSHAG00000018552	RIF1	65	50.752	Sarcophilus_harrisii
ENSPFOG00000017804	rif1	68	63.124	ENSSFOG00015021539	rif1	80	61.143	Scleropages_formosus
ENSPFOG00000017804	rif1	99	67.123	ENSSMAG00000011704	rif1	94	71.386	Scophthalmus_maximus
ENSPFOG00000017804	rif1	94	73.109	ENSSDUG00000015632	rif1	62	73.886	Seriola_dumerili
ENSPFOG00000017804	rif1	99	62.766	ENSSLDG00000019531	rif1	99	62.888	Seriola_lalandi_dorsalis
ENSPFOG00000017804	rif1	51	51.692	ENSSPUG00000003062	RIF1	52	51.003	Sphenodon_punctatus
ENSPFOG00000017804	rif1	65	74.849	ENSSPAG00000018359	rif1	99	74.849	Stegastes_partitus
ENSPFOG00000017804	rif1	69	50.704	ENSSSCG00000016395	RIF1	63	51.554	Sus_scrofa
ENSPFOG00000017804	rif1	99	57.646	ENSTRUG00000015808	rif1	99	56.343	Takifugu_rubripes
ENSPFOG00000017804	rif1	99	55.313	ENSTNIG00000011538	rif1	99	55.476	Tetraodon_nigroviridis
ENSPFOG00000017804	rif1	58	53.878	ENSTBEG00000016082	RIF1	55	53.878	Tupaia_belangeri
ENSPFOG00000017804	rif1	68	51.212	ENSTTRG00000011190	RIF1	64	51.134	Tursiops_truncatus
ENSPFOG00000017804	rif1	56	49.008	ENSUAMG00000026385	RIF1	59	49.057	Ursus_americanus
ENSPFOG00000017804	rif1	67	51.165	ENSUMAG00000000337	RIF1	63	51.084	Ursus_maritimus
ENSPFOG00000017804	rif1	75	48.162	ENSVPAG00000002162	RIF1	68	48.087	Vicugna_pacos
ENSPFOG00000017804	rif1	77	50.865	ENSVVUG00000011293	RIF1	64	50.786	Vulpes_vulpes
ENSPFOG00000017804	rif1	63	44.283	ENSXETG00000004530	rif1	70	47.447	Xenopus_tropicalis
ENSPFOG00000017804	rif1	97	85.349	ENSXMAG00000000506	rif1	99	85.170	Xiphophorus_maculatus