EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000017861 (Gene tree)
Gene ID: 103130812
Gene Symbol: smfn
Alias: -
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 13773 bases
Position: chrKI520288.1:117107-130879
Accession: 103130812
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000027502	RNase_T	PF00929.24	1.3e-34	1	1
ENSPFOP00000023162	RNase_T	PF00929.24	1.9e-34	1	1
ENSPFOP00000017956	RNase_T	PF00929.24	3.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000023489	-	922	-	ENSPFOP00000027502	203 (aa)	-	A0A096M7W1
ENSPFOT00000017978	-	2733	-	ENSPFOP00000017956	280 (aa)	XP_007542380	A0A087YIV3
ENSPFOT00000028581	-	2495	-	ENSPFOP00000023162	227 (aa)	-	A0A096LVH1

Gene Model

Click here to download ENSPFOG00000017861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000017861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000017861	smfn	99	79.000	ENSG00000076043	REXO2	99	79.032	Homo_sapiens
ENSPFOG00000017861	smfn	57	87.826	ENSAPOG00000011971	smfn	99	87.826	Acanthochromis_polyacanthus
ENSPFOG00000017861	smfn	99	80.000	ENSAMEG00000013263	REXO2	85	79.602	Ailuropoda_melanoleuca
ENSPFOG00000017861	smfn	91	84.239	ENSACIG00000023553	smfn	100	83.871	Amphilophus_citrinellus
ENSPFOG00000017861	smfn	66	86.466	ENSAOCG00000011565	smfn	81	86.466	Amphiprion_ocellaris
ENSPFOG00000017861	smfn	99	87.065	ENSAPEG00000012435	smfn	99	68.459	Amphiprion_percula
ENSPFOG00000017861	smfn	99	85.075	ENSATEG00000015385	smfn	97	69.203	Anabas_testudineus
ENSPFOG00000017861	smfn	95	76.166	ENSAPLG00000005045	REXO2	94	76.562	Anas_platyrhynchos
ENSPFOG00000017861	smfn	90	70.492	ENSACAG00000011631	REXO2	86	70.492	Anolis_carolinensis
ENSPFOG00000017861	smfn	57	64.655	ENSANAG00000027457	-	98	59.441	Aotus_nancymaae
ENSPFOG00000017861	smfn	99	79.500	ENSANAG00000020834	REXO2	85	79.104	Aotus_nancymaae
ENSPFOG00000017861	smfn	99	84.500	ENSACLG00000024566	smfn	95	86.188	Astatotilapia_calliptera
ENSPFOG00000017861	smfn	99	80.000	ENSBTAG00000005843	REXO2	85	79.602	Bos_taurus
ENSPFOG00000017861	smfn	87	49.153	WBGene00007429	C08B6.8	88	53.623	Caenorhabditis_elegans
ENSPFOG00000017861	smfn	99	78.500	ENSCJAG00000012434	REXO2	85	78.109	Callithrix_jacchus
ENSPFOG00000017861	smfn	97	80.203	ENSCAFG00000013511	REXO2	85	78.607	Canis_familiaris
ENSPFOG00000017861	smfn	99	80.000	ENSCAFG00020002513	REXO2	85	79.602	Canis_lupus_dingo
ENSPFOG00000017861	smfn	99	80.000	ENSCHIG00000009264	REXO2	85	79.602	Capra_hircus
ENSPFOG00000017861	smfn	95	68.750	ENSTSYG00000027948	-	99	68.394	Carlito_syrichta
ENSPFOG00000017861	smfn	99	79.500	ENSTSYG00000002237	REXO2	85	79.104	Carlito_syrichta
ENSPFOG00000017861	smfn	91	80.000	ENSCAPG00000006093	REXO2	99	79.570	Cavia_aperea
ENSPFOG00000017861	smfn	99	79.500	ENSCPOG00000010548	REXO2	97	72.052	Cavia_porcellus
ENSPFOG00000017861	smfn	99	79.500	ENSCCAG00000034979	REXO2	85	79.104	Cebus_capucinus
ENSPFOG00000017861	smfn	99	79.000	ENSCATG00000015278	REXO2	93	71.806	Cercocebus_atys
ENSPFOG00000017861	smfn	99	79.500	ENSCLAG00000011195	REXO2	97	72.368	Chinchilla_lanigera
ENSPFOG00000017861	smfn	99	79.000	ENSCSAG00000002754	REXO2	93	71.806	Chlorocebus_sabaeus
ENSPFOG00000017861	smfn	97	78.680	ENSCHOG00000000642	-	84	78.283	Choloepus_hoffmanni
ENSPFOG00000017861	smfn	51	84.466	ENSCHOG00000013497	REXO2	74	84.466	Choloepus_hoffmanni
ENSPFOG00000017861	smfn	70	73.944	ENSCPBG00000009359	REXO2	99	73.427	Chrysemys_picta_bellii
ENSPFOG00000017861	smfn	90	57.692	ENSCING00000009858	-	99	53.659	Ciona_intestinalis
ENSPFOG00000017861	smfn	99	79.000	ENSCANG00000034756	REXO2	93	71.806	Colobus_angolensis_palliatus
ENSPFOG00000017861	smfn	97	79.695	ENSCGRG00001013673	-	97	79.293	Cricetulus_griseus_chok1gshd
ENSPFOG00000017861	smfn	97	78.173	ENSCGRG00001010922	-	97	77.778	Cricetulus_griseus_chok1gshd
ENSPFOG00000017861	smfn	99	79.000	ENSCGRG00001019814	-	85	78.607	Cricetulus_griseus_chok1gshd
ENSPFOG00000017861	smfn	99	79.000	ENSCGRG00000006235	Rexo2	85	78.607	Cricetulus_griseus_crigri
ENSPFOG00000017861	smfn	94	84.293	ENSCSEG00000007214	smfn	79	78.636	Cynoglossus_semilaevis
ENSPFOG00000017861	smfn	90	89.071	ENSCVAG00000012008	smfn	99	89.071	Cyprinodon_variegatus
ENSPFOG00000017861	smfn	97	79.695	ENSDARG00000009806	smfn	88	71.983	Danio_rerio
ENSPFOG00000017861	smfn	85	83.721	ENSDNOG00000046533	REXO2	84	82.286	Dasypus_novemcinctus
ENSPFOG00000017861	smfn	99	79.500	ENSDORG00000011255	Rexo2	85	79.104	Dipodomys_ordii
ENSPFOG00000017861	smfn	95	63.021	ENSDORG00000025142	-	87	61.307	Dipodomys_ordii
ENSPFOG00000017861	smfn	86	55.172	FBgn0039115	CG10214	88	53.191	Drosophila_melanogaster
ENSPFOG00000017861	smfn	88	77.095	ENSEBUG00000013964	REXO2	61	77.095	Eptatretus_burgeri
ENSPFOG00000017861	smfn	97	81.218	ENSEASG00005006674	REXO2	97	72.489	Equus_asinus_asinus
ENSPFOG00000017861	smfn	97	81.218	ENSECAG00000005988	REXO2	97	72.489	Equus_caballus
ENSPFOG00000017861	smfn	98	80.303	ENSELUG00000020072	smfn	86	67.050	Esox_lucius
ENSPFOG00000017861	smfn	99	80.000	ENSFCAG00000018632	REXO2	85	79.602	Felis_catus
ENSPFOG00000017861	smfn	93	76.064	ENSFALG00000010044	REXO2	93	76.471	Ficedula_albicollis
ENSPFOG00000017861	smfn	99	79.500	ENSFDAG00000011764	REXO2	97	72.052	Fukomys_damarensis
ENSPFOG00000017861	smfn	92	81.818	ENSGMOG00000006370	smfn	98	81.053	Gadus_morhua
ENSPFOG00000017861	smfn	97	78.061	ENSGALG00000035980	REXO2	86	77.000	Gallus_gallus
ENSPFOG00000017861	smfn	99	97.015	ENSGAFG00000015349	smfn	99	95.341	Gambusia_affinis
ENSPFOG00000017861	smfn	96	86.154	ENSGACG00000020096	smfn	96	86.154	Gasterosteus_aculeatus
ENSPFOG00000017861	smfn	99	76.617	ENSGAGG00000021126	REXO2	88	75.862	Gopherus_agassizii
ENSPFOG00000017861	smfn	99	79.000	ENSGGOG00000023267	REXO2	85	78.607	Gorilla_gorilla
ENSPFOG00000017861	smfn	99	61.500	ENSHBUG00000020097	REXO2	84	59.633	Haplochromis_burtoni
ENSPFOG00000017861	smfn	97	80.203	ENSHGLG00000013556	REXO2	97	71.616	Heterocephalus_glaber_female
ENSPFOG00000017861	smfn	97	80.711	ENSHGLG00100005257	REXO2	97	72.052	Heterocephalus_glaber_male
ENSPFOG00000017861	smfn	89	78.333	ENSHCOG00000007122	smfn	98	78.333	Hippocampus_comes
ENSPFOG00000017861	smfn	96	83.590	ENSIPUG00000020440	rexo2	73	82.828	Ictalurus_punctatus
ENSPFOG00000017861	smfn	99	79.500	ENSSTOG00000012465	REXO2	85	79.208	Ictidomys_tridecemlineatus
ENSPFOG00000017861	smfn	99	56.716	ENSJJAG00000022605	-	81	56.716	Jaculus_jaculus
ENSPFOG00000017861	smfn	99	79.500	ENSJJAG00000013710	-	85	79.104	Jaculus_jaculus
ENSPFOG00000017861	smfn	95	85.492	ENSKMAG00000016795	smfn	100	69.965	Kryptolebias_marmoratus
ENSPFOG00000017861	smfn	92	81.183	ENSLBEG00000006021	smfn	98	81.183	Labrus_bergylta
ENSPFOG00000017861	smfn	98	69.154	ENSLACG00000018623	REXO2	83	68.473	Latimeria_chalumnae
ENSPFOG00000017861	smfn	99	81.188	ENSLOCG00000002389	smfn	96	81.188	Lepisosteus_oculatus
ENSPFOG00000017861	smfn	97	80.203	ENSLAFG00000012451	REXO2	85	78.607	Loxodonta_africana
ENSPFOG00000017861	smfn	99	79.000	ENSMFAG00000041155	REXO2	93	71.806	Macaca_fascicularis
ENSPFOG00000017861	smfn	99	79.000	ENSMMUG00000012269	REXO2	93	71.806	Macaca_mulatta
ENSPFOG00000017861	smfn	99	79.000	ENSMNEG00000033379	REXO2	93	71.806	Macaca_nemestrina
ENSPFOG00000017861	smfn	99	79.000	ENSMLEG00000036571	REXO2	93	71.806	Mandrillus_leucophaeus
ENSPFOG00000017861	smfn	100	85.714	ENSMAMG00000021209	smfn	99	69.395	Mastacembelus_armatus
ENSPFOG00000017861	smfn	99	84.500	ENSMZEG00005020730	REXO2	86	79.646	Maylandia_zebra
ENSPFOG00000017861	smfn	99	84.500	ENSMZEG00005023224	-	86	79.646	Maylandia_zebra
ENSPFOG00000017861	smfn	78	75.625	ENSMGAG00000003026	REXO2	99	75.155	Meleagris_gallopavo
ENSPFOG00000017861	smfn	99	79.000	ENSMAUG00000014576	Rexo2	85	78.607	Mesocricetus_auratus
ENSPFOG00000017861	smfn	99	79.500	ENSMICG00000010094	REXO2	85	79.104	Microcebus_murinus
ENSPFOG00000017861	smfn	99	79.000	ENSMOCG00000009016	Rexo2	85	78.607	Microtus_ochrogaster
ENSPFOG00000017861	smfn	99	82.587	ENSMMOG00000006430	smfn	77	81.250	Mola_mola
ENSPFOG00000017861	smfn	99	79.000	ENSMODG00000013913	REXO2	99	70.513	Monodelphis_domestica
ENSPFOG00000017861	smfn	99	83.582	ENSMALG00000018130	smfn	67	76.824	Monopterus_albus
ENSPFOG00000017861	smfn	99	78.000	MGP_CAROLIEiJ_G0032166	Rexo2	84	78.000	Mus_caroli
ENSPFOG00000017861	smfn	99	78.000	ENSMUSG00000032026	Rexo2	84	78.000	Mus_musculus
ENSPFOG00000017861	smfn	99	78.000	MGP_PahariEiJ_G0015034	Rexo2	84	78.000	Mus_pahari
ENSPFOG00000017861	smfn	99	78.000	MGP_SPRETEiJ_G0033305	Rexo2	84	78.000	Mus_spretus
ENSPFOG00000017861	smfn	99	80.000	ENSMPUG00000003947	REXO2	85	79.602	Mustela_putorius_furo
ENSPFOG00000017861	smfn	99	79.000	ENSMLUG00000009030	REXO2	85	78.607	Myotis_lucifugus
ENSPFOG00000017861	smfn	97	80.203	ENSNGAG00000008819	Rexo2	97	79.798	Nannospalax_galili
ENSPFOG00000017861	smfn	91	83.696	ENSNBRG00000006529	smfn	98	83.333	Neolamprologus_brichardi
ENSPFOG00000017861	smfn	53	52.703	ENSNBRG00000015319	-	92	52.703	Neolamprologus_brichardi
ENSPFOG00000017861	smfn	99	79.000	ENSNLEG00000029745	REXO2	85	78.607	Nomascus_leucogenys
ENSPFOG00000017861	smfn	99	78.500	ENSMEUG00000011558	REXO2	92	78.500	Notamacropus_eugenii
ENSPFOG00000017861	smfn	97	56.345	ENSOPRG00000011076	REXO2	85	55.224	Ochotona_princeps
ENSPFOG00000017861	smfn	91	80.000	ENSODEG00000009750	-	99	79.570	Octodon_degus
ENSPFOG00000017861	smfn	87	65.537	ENSODEG00000016046	-	89	64.804	Octodon_degus
ENSPFOG00000017861	smfn	99	85.000	ENSONIG00000001954	smfn	97	80.088	Oreochromis_niloticus
ENSPFOG00000017861	smfn	98	78.392	ENSOANG00000001754	REXO2	85	77.228	Ornithorhynchus_anatinus
ENSPFOG00000017861	smfn	97	80.711	ENSOCUG00000004274	REXO2	79	80.711	Oryctolagus_cuniculus
ENSPFOG00000017861	smfn	99	81.592	ENSORLG00000005119	smfn	85	67.528	Oryzias_latipes
ENSPFOG00000017861	smfn	99	82.090	ENSORLG00020010121	smfn	71	77.578	Oryzias_latipes_hni
ENSPFOG00000017861	smfn	99	82.587	ENSORLG00015015699	smfn	85	68.266	Oryzias_latipes_hsok
ENSPFOG00000017861	smfn	70	75.352	ENSOMEG00000008940	-	99	75.352	Oryzias_melastigma
ENSPFOG00000017861	smfn	99	78.109	ENSOMEG00000016878	REXO2	80	73.991	Oryzias_melastigma
ENSPFOG00000017861	smfn	99	79.500	ENSOGAG00000016860	REXO2	85	79.104	Otolemur_garnettii
ENSPFOG00000017861	smfn	97	81.218	ENSOARG00000001040	REXO2	94	80.000	Ovis_aries
ENSPFOG00000017861	smfn	99	79.000	ENSPPAG00000039849	REXO2	85	78.607	Pan_paniscus
ENSPFOG00000017861	smfn	99	80.000	ENSPPRG00000007255	REXO2	85	79.602	Panthera_pardus
ENSPFOG00000017861	smfn	91	80.541	ENSPTIG00000015578	REXO2	99	80.108	Panthera_tigris_altaica
ENSPFOG00000017861	smfn	99	79.000	ENSPTRG00000004306	REXO2	85	78.607	Pan_troglodytes
ENSPFOG00000017861	smfn	99	79.000	ENSPANG00000010675	REXO2	93	71.806	Papio_anubis
ENSPFOG00000017861	smfn	97	81.218	ENSPKIG00000000911	smfn	95	66.667	Paramormyrops_kingsleyae
ENSPFOG00000017861	smfn	97	79.695	ENSPSIG00000005151	REXO2	97	62.222	Pelodiscus_sinensis
ENSPFOG00000017861	smfn	92	82.888	ENSPMGG00000007442	smfn	99	82.888	Periophthalmus_magnuspinnatus
ENSPFOG00000017861	smfn	97	65.482	ENSPEMG00000001421	Rexo2	84	64.179	Peromyscus_maniculatus_bairdii
ENSPFOG00000017861	smfn	56	74.561	ENSPMAG00000001022	REXO2	98	74.561	Petromyzon_marinus
ENSPFOG00000017861	smfn	97	80.203	ENSPCIG00000011227	REXO2	53	80.203	Phascolarctos_cinereus
ENSPFOG00000017861	smfn	92	94.942	ENSPLAG00000007327	REXO2	98	94.942	Poecilia_latipinna
ENSPFOG00000017861	smfn	100	99.286	ENSPMEG00000017343	smfn	100	99.286	Poecilia_mexicana
ENSPFOG00000017861	smfn	100	96.786	ENSPREG00000016438	smfn	100	96.786	Poecilia_reticulata
ENSPFOG00000017861	smfn	99	79.000	ENSPPYG00000003895	REXO2	85	78.607	Pongo_abelii
ENSPFOG00000017861	smfn	97	79.695	ENSPCAG00000005237	REXO2	85	78.109	Procavia_capensis
ENSPFOG00000017861	smfn	78	83.544	ENSPCOG00000027639	REXO2	83	81.988	Propithecus_coquereli
ENSPFOG00000017861	smfn	99	68.317	ENSPVAG00000005295	REXO2	85	68.317	Pteropus_vampyrus
ENSPFOG00000017861	smfn	99	84.000	ENSPNYG00000018401	smfn	83	80.275	Pundamilia_nyererei
ENSPFOG00000017861	smfn	96	81.443	ENSPNAG00000005290	smfn	82	74.775	Pygocentrus_nattereri
ENSPFOG00000017861	smfn	99	78.500	ENSRNOG00000018939	Rexo2	84	78.500	Rattus_norvegicus
ENSPFOG00000017861	smfn	99	79.000	ENSRBIG00000037809	REXO2	93	71.806	Rhinopithecus_bieti
ENSPFOG00000017861	smfn	99	79.000	ENSRROG00000038928	REXO2	93	71.806	Rhinopithecus_roxellana
ENSPFOG00000017861	smfn	88	45.161	YLR059C	REX2	78	41.014	Saccharomyces_cerevisiae
ENSPFOG00000017861	smfn	99	79.500	ENSSBOG00000028651	REXO2	85	79.104	Saimiri_boliviensis_boliviensis
ENSPFOG00000017861	smfn	99	79.000	ENSSHAG00000008008	REXO2	100	70.513	Sarcophilus_harrisii
ENSPFOG00000017861	smfn	91	80.541	ENSSFOG00015022414	smfn	98	80.541	Scleropages_formosus
ENSPFOG00000017861	smfn	99	84.080	ENSSMAG00000003168	smfn	98	67.266	Scophthalmus_maximus
ENSPFOG00000017861	smfn	99	86.070	ENSSDUG00000015624	smfn	99	67.958	Seriola_dumerili
ENSPFOG00000017861	smfn	99	86.567	ENSSLDG00000014005	smfn	99	68.310	Seriola_lalandi_dorsalis
ENSPFOG00000017861	smfn	63	86.614	ENSSARG00000014530	REXO2	100	86.614	Sorex_araneus
ENSPFOG00000017861	smfn	77	74.522	ENSSPUG00000006005	REXO2	85	74.051	Sphenodon_punctatus
ENSPFOG00000017861	smfn	91	87.027	ENSSPAG00000001530	smfn	99	87.027	Stegastes_partitus
ENSPFOG00000017861	smfn	97	81.218	ENSSSCG00000015056	REXO2	85	79.602	Sus_scrofa
ENSPFOG00000017861	smfn	98	76.263	ENSTGUG00000000121	REXO2	88	74.272	Taeniopygia_guttata
ENSPFOG00000017861	smfn	96	82.474	ENSTRUG00000021529	smfn	82	77.876	Takifugu_rubripes
ENSPFOG00000017861	smfn	94	84.211	ENSTNIG00000008588	smfn	88	83.838	Tetraodon_nigroviridis
ENSPFOG00000017861	smfn	99	79.500	ENSTBEG00000017040	REXO2	85	79.104	Tupaia_belangeri
ENSPFOG00000017861	smfn	97	80.711	ENSTTRG00000014928	REXO2	84	80.303	Tursiops_truncatus
ENSPFOG00000017861	smfn	97	74.874	ENSUAMG00000019096	REXO2	83	82.609	Ursus_americanus
ENSPFOG00000017861	smfn	99	80.000	ENSUMAG00000003770	REXO2	85	79.602	Ursus_maritimus
ENSPFOG00000017861	smfn	91	62.162	ENSVPAG00000006301	REXO2	99	61.828	Vicugna_pacos
ENSPFOG00000017861	smfn	98	80.402	ENSVVUG00000025223	REXO2	84	80.808	Vulpes_vulpes
ENSPFOG00000017861	smfn	98	77.500	ENSXETG00000012648	rexo2	97	69.198	Xenopus_tropicalis
ENSPFOG00000017861	smfn	94	94.211	ENSXCOG00000018838	smfn	95	96.237	Xiphophorus_couchianus
ENSPFOG00000017861	smfn	99	94.527	ENSXMAG00000021125	smfn	88	91.786	Xiphophorus_maculatus