EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000018325 (Gene tree)
Gene ID: 103140933
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1B-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 4113 bases
Position: chrKI519613.1:5104928-5109040
Accession: 103140933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000018429	RRM_1	PF00076.22	2.8e-33	1	2
ENSPFOP00000018429	RRM_1	PF00076.22	2.8e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000018451	-	2210	XM_007556306	ENSPFOP00000018429	279 (aa)	XP_007556368	A0A087YK76

Gene Model

Click here to download ENSPFOG00000018325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000018325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000018325	-	83	41.065	ENSPFOG00000017700	srsf5b	55	49.711
ENSPFOG00000018325	-	65	68.132	ENSPFOG00000019792	srsf9	73	67.582
ENSPFOG00000018325	-	70	40.845	ENSPFOG00000022993	srsf5a	65	40.278
ENSPFOG00000018325	-	70	38.389	ENSPFOG00000006437	srsf6a	54	37.915
ENSPFOG00000018325	-	65	87.293	ENSPFOG00000009643	-	98	87.293
ENSPFOG00000018325	-	70	44.221	ENSPFOG00000001306	srsf4	53	44.000
ENSPFOG00000018325	-	69	87.565	ENSPFOG00000009640	-	79	87.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000018325	-	86	85.714	ENSG00000136450	SRSF1	94	86.911	Homo_sapiens
ENSPFOG00000018325	-	69	87.565	ENSAPOG00000002748	-	79	87.310	Acanthochromis_polyacanthus
ENSPFOG00000018325	-	70	92.462	ENSAPOG00000008542	-	81	92.118	Acanthochromis_polyacanthus
ENSPFOG00000018325	-	70	84.536	ENSAMEG00000002635	SRSF1	79	87.879	Ailuropoda_melanoleuca
ENSPFOG00000018325	-	69	87.047	ENSACIG00000008091	srsf1a	84	86.802	Amphilophus_citrinellus
ENSPFOG00000018325	-	70	92.462	ENSAOCG00000000337	-	82	92.118	Amphiprion_ocellaris
ENSPFOG00000018325	-	69	87.565	ENSAOCG00000010671	-	84	87.310	Amphiprion_ocellaris
ENSPFOG00000018325	-	69	87.565	ENSAPEG00000009915	-	84	87.310	Amphiprion_percula
ENSPFOG00000018325	-	70	92.462	ENSAPEG00000023352	-	81	92.118	Amphiprion_percula
ENSPFOG00000018325	-	69	87.565	ENSATEG00000022403	-	79	87.310	Anabas_testudineus
ENSPFOG00000018325	-	73	89.216	ENSATEG00000021567	-	97	91.102	Anabas_testudineus
ENSPFOG00000018325	-	70	88.660	ENSACAG00000005542	-	79	88.889	Anolis_carolinensis
ENSPFOG00000018325	-	71	60.606	ENSANAG00000025417	-	75	62.626	Aotus_nancymaae
ENSPFOG00000018325	-	86	85.714	ENSANAG00000020583	-	96	82.857	Aotus_nancymaae
ENSPFOG00000018325	-	84	83.817	ENSAMXG00000035996	srsf1a	81	88.725	Astyanax_mexicanus
ENSPFOG00000018325	-	86	85.714	ENSBTAG00000014766	SRSF1	79	89.899	Bos_taurus
ENSPFOG00000018325	-	70	82.474	ENSCJAG00000008111	-	88	82.828	Callithrix_jacchus
ENSPFOG00000018325	-	86	85.714	ENSCJAG00000041713	-	96	82.857	Callithrix_jacchus
ENSPFOG00000018325	-	86	85.714	ENSCAFG00000017430	SRSF1	78	89.899	Canis_familiaris
ENSPFOG00000018325	-	86	85.714	ENSCAFG00020025632	-	78	89.899	Canis_lupus_dingo
ENSPFOG00000018325	-	70	89.691	ENSCHIG00000010787	SRSF1	79	89.899	Capra_hircus
ENSPFOG00000018325	-	86	85.714	ENSTSYG00000013899	-	96	82.857	Carlito_syrichta
ENSPFOG00000018325	-	86	85.714	ENSCPOG00000032681	-	79	89.899	Cavia_porcellus
ENSPFOG00000018325	-	86	85.714	ENSCCAG00000029484	-	96	82.857	Cebus_capucinus
ENSPFOG00000018325	-	86	85.714	ENSCATG00000042294	-	96	82.857	Cercocebus_atys
ENSPFOG00000018325	-	86	85.714	ENSCLAG00000014707	-	79	89.899	Chinchilla_lanigera
ENSPFOG00000018325	-	86	84.898	ENSCSAG00000005642	-	78	88.889	Chlorocebus_sabaeus
ENSPFOG00000018325	-	70	89.691	ENSCHOG00000001899	SRSF1	79	89.899	Choloepus_hoffmanni
ENSPFOG00000018325	-	86	85.306	ENSCPBG00000009851	-	79	89.394	Chrysemys_picta_bellii
ENSPFOG00000018325	-	86	85.714	ENSCANG00000029726	-	96	82.857	Colobus_angolensis_palliatus
ENSPFOG00000018325	-	86	85.714	ENSCGRG00001000670	Srsf1	78	89.899	Cricetulus_griseus_chok1gshd
ENSPFOG00000018325	-	86	85.714	ENSCGRG00000005590	Srsf1	79	89.899	Cricetulus_griseus_crigri
ENSPFOG00000018325	-	69	87.692	ENSCSEG00000014272	-	80	87.940	Cynoglossus_semilaevis
ENSPFOG00000018325	-	70	83.732	ENSCSEG00000009973	-	81	83.568	Cynoglossus_semilaevis
ENSPFOG00000018325	-	88	98.785	ENSCVAG00000005458	-	100	98.785	Cyprinodon_variegatus
ENSPFOG00000018325	-	69	87.565	ENSCVAG00000018617	-	79	87.310	Cyprinodon_variegatus
ENSPFOG00000018325	-	70	86.341	ENSDARG00000057691	srsf1a	100	86.528	Danio_rerio
ENSPFOG00000018325	-	70	89.796	ENSDARG00000017843	srsf1b	81	90.000	Danio_rerio
ENSPFOG00000018325	-	86	85.714	ENSDNOG00000011737	-	78	89.899	Dasypus_novemcinctus
ENSPFOG00000018325	-	86	85.714	ENSDORG00000015082	Srsf1	79	89.899	Dipodomys_ordii
ENSPFOG00000018325	-	65	88.462	ENSETEG00000005349	-	63	88.525	Echinops_telfairi
ENSPFOG00000018325	-	86	85.714	ENSEASG00005002922	-	78	89.899	Equus_asinus_asinus
ENSPFOG00000018325	-	70	89.691	ENSECAG00000016654	SRSF1	79	89.899	Equus_caballus
ENSPFOG00000018325	-	65	89.560	ENSEEUG00000009255	-	62	89.617	Erinaceus_europaeus
ENSPFOG00000018325	-	70	88.265	ENSELUG00000021646	srsf1a	79	88.000	Esox_lucius
ENSPFOG00000018325	-	86	85.714	ENSFCAG00000002250	-	91	89.617	Felis_catus
ENSPFOG00000018325	-	66	85.821	ENSFALG00000005062	-	78	69.697	Ficedula_albicollis
ENSPFOG00000018325	-	86	85.714	ENSFDAG00000010646	-	79	89.899	Fukomys_damarensis
ENSPFOG00000018325	-	69	87.565	ENSFHEG00000003174	srsf1a	84	87.310	Fundulus_heteroclitus
ENSPFOG00000018325	-	81	83.556	ENSGMOG00000014787	-	81	83.756	Gadus_morhua
ENSPFOG00000018325	-	70	89.175	ENSGALG00000005525	SRSF1	79	89.394	Gallus_gallus
ENSPFOG00000018325	-	70	86.082	ENSGACG00000020621	srsf1b	80	84.848	Gasterosteus_aculeatus
ENSPFOG00000018325	-	86	85.306	ENSGAGG00000022965	-	78	89.394	Gopherus_agassizii
ENSPFOG00000018325	-	86	85.714	ENSGGOG00000004386	SRSF1	96	82.857	Gorilla_gorilla
ENSPFOG00000018325	-	71	85.930	ENSHBUG00000016788	srsf1a	84	85.714	Haplochromis_burtoni
ENSPFOG00000018325	-	59	91.463	ENSHGLG00000000600	-	78	91.667	Heterocephalus_glaber_female
ENSPFOG00000018325	-	59	91.463	ENSHGLG00000000669	-	78	91.667	Heterocephalus_glaber_female
ENSPFOG00000018325	-	86	85.714	ENSHGLG00100016906	-	79	89.899	Heterocephalus_glaber_male
ENSPFOG00000018325	-	70	82.412	ENSHCOG00000018918	srsf1a	79	84.236	Hippocampus_comes
ENSPFOG00000018325	-	82	81.590	ENSIPUG00000017039	srsf1a	80	88.119	Ictalurus_punctatus
ENSPFOG00000018325	-	70	89.744	ENSIPUG00000008750	srsf1b	80	89.447	Ictalurus_punctatus
ENSPFOG00000018325	-	86	85.714	ENSSTOG00000000243	-	91	89.617	Ictidomys_tridecemlineatus
ENSPFOG00000018325	-	86	85.714	ENSJJAG00000000102	-	79	89.899	Jaculus_jaculus
ENSPFOG00000018325	-	69	87.565	ENSKMAG00000019232	srsf1a	79	87.310	Kryptolebias_marmoratus
ENSPFOG00000018325	-	70	85.930	ENSLBEG00000015294	-	82	86.700	Labrus_bergylta
ENSPFOG00000018325	-	69	87.565	ENSLBEG00000020864	-	84	87.310	Labrus_bergylta
ENSPFOG00000018325	-	72	85.000	ENSLACG00000014160	srsf1a	76	85.294	Latimeria_chalumnae
ENSPFOG00000018325	-	70	88.660	ENSLOCG00000005994	srsf1a	79	88.384	Lepisosteus_oculatus
ENSPFOG00000018325	-	70	89.691	ENSLAFG00000025743	SRSF1	79	89.899	Loxodonta_africana
ENSPFOG00000018325	-	86	85.714	ENSMFAG00000040003	-	96	82.857	Macaca_fascicularis
ENSPFOG00000018325	-	86	85.714	ENSMMUG00000004725	SRSF1	96	82.857	Macaca_mulatta
ENSPFOG00000018325	-	70	86.598	ENSMMUG00000003260	-	94	86.224	Macaca_mulatta
ENSPFOG00000018325	-	86	85.714	ENSMNEG00000027680	-	96	82.857	Macaca_nemestrina
ENSPFOG00000018325	-	70	86.082	ENSMNEG00000015983	-	78	86.364	Macaca_nemestrina
ENSPFOG00000018325	-	70	84.536	ENSMLEG00000015243	-	77	85.354	Mandrillus_leucophaeus
ENSPFOG00000018325	-	70	89.691	ENSMLEG00000040509	SRSF1	79	89.899	Mandrillus_leucophaeus
ENSPFOG00000018325	-	70	90.206	ENSMAMG00000019687	-	80	90.404	Mastacembelus_armatus
ENSPFOG00000018325	-	69	87.565	ENSMAMG00000018454	-	79	87.310	Mastacembelus_armatus
ENSPFOG00000018325	-	70	90.206	ENSMAMG00000019691	-	96	89.270	Mastacembelus_armatus
ENSPFOG00000018325	-	86	85.714	ENSMAUG00000021845	Srsf1	79	89.899	Mesocricetus_auratus
ENSPFOG00000018325	-	86	85.714	ENSMICG00000013639	-	96	82.857	Microcebus_murinus
ENSPFOG00000018325	-	86	85.714	ENSMOCG00000001996	Srsf1	79	89.899	Microtus_ochrogaster
ENSPFOG00000018325	-	69	87.047	ENSMMOG00000014354	srsf1a	84	86.802	Mola_mola
ENSPFOG00000018325	-	65	89.560	ENSMODG00000014781	-	63	89.071	Monodelphis_domestica
ENSPFOG00000018325	-	72	75.124	ENSMALG00000007763	-	79	78.788	Monopterus_albus
ENSPFOG00000018325	-	69	87.047	ENSMALG00000017129	-	76	86.802	Monopterus_albus
ENSPFOG00000018325	-	86	85.714	MGP_CAROLIEiJ_G0016943	Srsf1	91	89.617	Mus_caroli
ENSPFOG00000018325	-	86	85.714	ENSMUSG00000018379	Srsf1	91	89.617	Mus_musculus
ENSPFOG00000018325	-	86	85.714	MGP_PahariEiJ_G0018074	Srsf1	79	89.899	Mus_pahari
ENSPFOG00000018325	-	86	85.714	MGP_SPRETEiJ_G0017790	Srsf1	91	89.617	Mus_spretus
ENSPFOG00000018325	-	70	89.691	ENSMPUG00000015369	SRSF1	79	89.899	Mustela_putorius_furo
ENSPFOG00000018325	-	72	83.085	ENSMLUG00000023995	-	79	83.333	Myotis_lucifugus
ENSPFOG00000018325	-	70	89.691	ENSMLUG00000011040	SRSF1	79	89.899	Myotis_lucifugus
ENSPFOG00000018325	-	70	89.691	ENSNGAG00000011395	Srsf1	79	89.899	Nannospalax_galili
ENSPFOG00000018325	-	87	78.099	ENSNBRG00000008041	srsf1b	80	76.263	Neolamprologus_brichardi
ENSPFOG00000018325	-	86	85.714	ENSNLEG00000008088	-	96	82.857	Nomascus_leucogenys
ENSPFOG00000018325	-	86	85.714	ENSODEG00000011481	-	79	89.899	Octodon_degus
ENSPFOG00000018325	-	83	87.879	ENSONIG00000004860	-	81	88.889	Oreochromis_niloticus
ENSPFOG00000018325	-	69	87.047	ENSONIG00000013160	-	78	86.802	Oreochromis_niloticus
ENSPFOG00000018325	-	82	69.915	ENSOCUG00000010894	-	76	72.165	Oryctolagus_cuniculus
ENSPFOG00000018325	-	69	87.565	ENSORLG00000004580	srsf1a	79	87.310	Oryzias_latipes
ENSPFOG00000018325	-	69	87.565	ENSORLG00020009456	srsf1a	84	87.310	Oryzias_latipes_hni
ENSPFOG00000018325	-	69	87.565	ENSORLG00015014384	srsf1a	84	87.310	Oryzias_latipes_hsok
ENSPFOG00000018325	-	63	87.429	ENSOMEG00000004106	srsf1a	72	87.151	Oryzias_melastigma
ENSPFOG00000018325	-	74	89.320	ENSOGAG00000025950	-	79	89.899	Otolemur_garnettii
ENSPFOG00000018325	-	70	85.052	ENSOARG00000008323	SRSF1	78	84.848	Ovis_aries
ENSPFOG00000018325	-	86	85.714	ENSPPAG00000043403	-	96	82.857	Pan_paniscus
ENSPFOG00000018325	-	86	85.714	ENSPPRG00000004238	-	91	89.617	Panthera_pardus
ENSPFOG00000018325	-	86	85.714	ENSPTRG00000049077	SRSF1	96	82.857	Pan_troglodytes
ENSPFOG00000018325	-	86	85.714	ENSPANG00000022305	-	96	82.857	Papio_anubis
ENSPFOG00000018325	-	87	66.939	ENSPANG00000030275	-	75	64.141	Papio_anubis
ENSPFOG00000018325	-	70	87.245	ENSPKIG00000007204	srsf1a	85	87.000	Paramormyrops_kingsleyae
ENSPFOG00000018325	-	70	89.175	ENSPKIG00000012857	srsf1b	80	88.889	Paramormyrops_kingsleyae
ENSPFOG00000018325	-	70	82.143	ENSPSIG00000009000	-	74	91.971	Pelodiscus_sinensis
ENSPFOG00000018325	-	69	84.974	ENSPMGG00000013112	-	83	84.264	Periophthalmus_magnuspinnatus
ENSPFOG00000018325	-	71	85.787	ENSPMGG00000005467	-	79	87.302	Periophthalmus_magnuspinnatus
ENSPFOG00000018325	-	86	85.714	ENSPEMG00000021416	Srsf1	79	89.899	Peromyscus_maniculatus_bairdii
ENSPFOG00000018325	-	70	89.691	ENSPCIG00000006076	-	80	89.394	Phascolarctos_cinereus
ENSPFOG00000018325	-	88	100.000	ENSPLAG00000008416	srsf1b	100	100.000	Poecilia_latipinna
ENSPFOG00000018325	-	88	100.000	ENSPMEG00000002388	-	100	100.000	Poecilia_mexicana
ENSPFOG00000018325	-	69	87.565	ENSPREG00000009667	srsf1a	79	87.310	Poecilia_reticulata
ENSPFOG00000018325	-	86	85.714	ENSPPYG00000008240	SRSF1	79	89.899	Pongo_abelii
ENSPFOG00000018325	-	70	89.691	ENSPCAG00000005199	SRSF1	79	89.899	Procavia_capensis
ENSPFOG00000018325	-	71	71.859	ENSPCOG00000025736	-	94	71.717	Propithecus_coquereli
ENSPFOG00000018325	-	86	85.714	ENSPCOG00000023654	-	96	82.857	Propithecus_coquereli
ENSPFOG00000018325	-	84	84.388	ENSPNAG00000022241	srsf1a	80	88.000	Pygocentrus_nattereri
ENSPFOG00000018325	-	70	87.113	ENSPNAG00000014601	srsf1b	80	86.869	Pygocentrus_nattereri
ENSPFOG00000018325	-	70	89.691	ENSRNOG00000050323	Srsf1	79	89.899	Rattus_norvegicus
ENSPFOG00000018325	-	86	85.714	ENSRBIG00000034445	-	96	82.857	Rhinopithecus_bieti
ENSPFOG00000018325	-	86	85.714	ENSRROG00000041506	-	96	82.857	Rhinopithecus_roxellana
ENSPFOG00000018325	-	86	85.714	ENSSBOG00000025377	-	96	82.857	Saimiri_boliviensis_boliviensis
ENSPFOG00000018325	-	70	89.691	ENSSHAG00000002552	-	80	89.394	Sarcophilus_harrisii
ENSPFOG00000018325	-	70	88.144	ENSSFOG00015004800	srsf1a	79	87.879	Scleropages_formosus
ENSPFOG00000018325	-	70	89.000	ENSSMAG00000009719	-	80	88.725	Scophthalmus_maximus
ENSPFOG00000018325	-	69	87.047	ENSSMAG00000007018	-	79	86.802	Scophthalmus_maximus
ENSPFOG00000018325	-	86	75.207	ENSSDUG00000003929	-	84	82.000	Seriola_dumerili
ENSPFOG00000018325	-	69	87.565	ENSSDUG00000011303	-	84	87.310	Seriola_dumerili
ENSPFOG00000018325	-	69	87.565	ENSSLDG00000010543	-	79	87.310	Seriola_lalandi_dorsalis
ENSPFOG00000018325	-	70	79.487	ENSSLDG00000016868	-	78	77.387	Seriola_lalandi_dorsalis
ENSPFOG00000018325	-	82	75.652	ENSSLDG00000016895	-	77	83.243	Seriola_lalandi_dorsalis
ENSPFOG00000018325	-	65	89.560	ENSSARG00000010949	-	62	89.617	Sorex_araneus
ENSPFOG00000018325	-	86	85.306	ENSSPUG00000000804	-	92	89.071	Sphenodon_punctatus
ENSPFOG00000018325	-	70	89.904	ENSSPAG00000014152	-	82	89.151	Stegastes_partitus
ENSPFOG00000018325	-	69	88.083	ENSSPAG00000022562	-	79	87.817	Stegastes_partitus
ENSPFOG00000018325	-	86	85.714	ENSSSCG00000017626	-	79	89.899	Sus_scrofa
ENSPFOG00000018325	-	69	86.528	ENSTRUG00000003691	srsf1a	79	86.294	Takifugu_rubripes
ENSPFOG00000018325	-	69	86.528	ENSTNIG00000016223	srsf1a	79	86.294	Tetraodon_nigroviridis
ENSPFOG00000018325	-	65	87.912	ENSTBEG00000015378	-	62	87.978	Tupaia_belangeri
ENSPFOG00000018325	-	70	89.691	ENSUAMG00000009858	SRSF1	79	89.899	Ursus_americanus
ENSPFOG00000018325	-	86	85.714	ENSUMAG00000000455	-	78	89.899	Ursus_maritimus
ENSPFOG00000018325	-	70	89.175	ENSVPAG00000010094	SRSF1	79	89.394	Vicugna_pacos
ENSPFOG00000018325	-	86	85.714	ENSVVUG00000011882	-	78	89.899	Vulpes_vulpes
ENSPFOG00000018325	-	76	81.690	ENSXETG00000008954	srsf1	81	82.488	Xenopus_tropicalis
ENSPFOG00000018325	-	69	87.565	ENSXMAG00000011766	srsf1a	79	87.310	Xiphophorus_maculatus