EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000018357 (Gene tree)
Gene ID: 103137300
Gene Symbol: npm1b
Alias: -
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 21687 bases
Position: chrKI519649.1:455445-477131
Accession: 103137300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000018460	Nucleoplasmin	PF03066.15	7.7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000018482	-	2779	XM_007550981	ENSPFOP00000018460	297 (aa)	XP_007551043	A0A087YKA7

Gene Model

Click here to download ENSPFOG00000018357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000018357's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000018357	npm1b	96	40.816	ENSPFOG00000019173	npm1a	97	40.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000018357	npm1b	100	77.592	ENSAPOG00000004268	npm1b	100	78.595	Acanthochromis_polyacanthus
ENSPFOG00000018357	npm1b	100	77.258	ENSAOCG00000012549	npm1b	100	77.258	Amphiprion_ocellaris
ENSPFOG00000018357	npm1b	100	76.589	ENSAPEG00000000868	npm1b	100	76.254	Amphiprion_percula
ENSPFOG00000018357	npm1b	100	78.261	ENSATEG00000006254	npm1b	100	78.261	Anabas_testudineus
ENSPFOG00000018357	npm1b	98	45.098	ENSACAG00000015626	-	96	45.734	Anolis_carolinensis
ENSPFOG00000018357	npm1b	50	85.235	ENSACLG00000013812	npm1b	71	84.106	Astatotilapia_calliptera
ENSPFOG00000018357	npm1b	98	60.396	ENSAMXG00000042148	npm1b	99	61.056	Astyanax_mexicanus
ENSPFOG00000018357	npm1b	54	35.976	ENSCAFG00000023359	-	58	36.601	Canis_familiaris
ENSPFOG00000018357	npm1b	98	43.689	ENSCPBG00000021221	-	60	44.660	Chrysemys_picta_bellii
ENSPFOG00000018357	npm1b	100	71.333	ENSCSEG00000004530	npm1b	100	70.333	Cynoglossus_semilaevis
ENSPFOG00000018357	npm1b	100	90.236	ENSCVAG00000013016	npm1b	100	90.236	Cyprinodon_variegatus
ENSPFOG00000018357	npm1b	99	63.907	ENSDARG00000037675	npm1b	99	63.696	Danio_rerio
ENSPFOG00000018357	npm1b	99	62.829	ENSELUG00000022123	npm1b	99	62.829	Esox_lucius
ENSPFOG00000018357	npm1b	94	42.657	ENSFALG00000003320	-	94	43.007	Ficedula_albicollis
ENSPFOG00000018357	npm1b	100	88.629	ENSFHEG00000020794	npm1b	100	88.629	Fundulus_heteroclitus
ENSPFOG00000018357	npm1b	98	59.322	ENSGMOG00000002689	npm1b	100	60.678	Gadus_morhua
ENSPFOG00000018357	npm1b	98	43.092	ENSGALG00000002197	-	73	42.105	Gallus_gallus
ENSPFOG00000018357	npm1b	100	93.603	ENSGAFG00000017709	npm1b	100	93.603	Gambusia_affinis
ENSPFOG00000018357	npm1b	98	73.810	ENSGACG00000016706	npm1b	100	73.469	Gasterosteus_aculeatus
ENSPFOG00000018357	npm1b	98	41.935	ENSGAGG00000020250	-	100	43.871	Gopherus_agassizii
ENSPFOG00000018357	npm1b	100	80.268	ENSHBUG00000019903	npm1b	95	80.268	Haplochromis_burtoni
ENSPFOG00000018357	npm1b	100	68.000	ENSHCOG00000003895	npm1b	100	68.000	Hippocampus_comes
ENSPFOG00000018357	npm1b	99	57.143	ENSIPUG00000020165	npm1b	99	57.807	Ictalurus_punctatus
ENSPFOG00000018357	npm1b	99	83.729	ENSKMAG00000008260	npm1b	99	85.424	Kryptolebias_marmoratus
ENSPFOG00000018357	npm1b	90	44.097	ENSLACG00000001779	-	100	44.097	Latimeria_chalumnae
ENSPFOG00000018357	npm1b	94	47.475	ENSLOCG00000001942	npm1b	100	48.822	Lepisosteus_oculatus
ENSPFOG00000018357	npm1b	72	73.059	ENSMAMG00000015335	npm1b	100	73.973	Mastacembelus_armatus
ENSPFOG00000018357	npm1b	93	43.110	ENSMGAG00000001591	-	100	41.343	Meleagris_gallopavo
ENSPFOG00000018357	npm1b	81	73.251	ENSMALG00000015383	npm1b	100	74.486	Monopterus_albus
ENSPFOG00000018357	npm1b	50	85.906	ENSNBRG00000014133	npm1b	82	84.768	Neolamprologus_brichardi
ENSPFOG00000018357	npm1b	99	70.270	ENSONIG00000001397	npm1b	98	70.358	Oreochromis_niloticus
ENSPFOG00000018357	npm1b	100	63.300	ENSOMEG00000003414	npm1b	100	62.626	Oryzias_melastigma
ENSPFOG00000018357	npm1b	99	58.576	ENSPKIG00000020050	npm1b	99	58.900	Paramormyrops_kingsleyae
ENSPFOG00000018357	npm1b	96	43.960	ENSPSIG00000011204	-	92	44.558	Pelodiscus_sinensis
ENSPFOG00000018357	npm1b	88	35.821	ENSPMAG00000004930	npm1b	99	35.563	Petromyzon_marinus
ENSPFOG00000018357	npm1b	50	85.235	ENSPNYG00000001427	npm1b	71	84.106	Pundamilia_nyererei
ENSPFOG00000018357	npm1b	98	60.000	ENSPNAG00000005498	npm1b	99	60.667	Pygocentrus_nattereri
ENSPFOG00000018357	npm1b	99	57.191	ENSSFOG00015005064	npm1b	100	57.525	Scleropages_formosus
ENSPFOG00000018357	npm1b	100	73.826	ENSSMAG00000008088	npm1b	100	73.154	Scophthalmus_maximus
ENSPFOG00000018357	npm1b	100	78.595	ENSSDUG00000007726	npm1b	100	78.595	Seriola_dumerili
ENSPFOG00000018357	npm1b	100	78.930	ENSSLDG00000021396	npm1b	100	78.930	Seriola_lalandi_dorsalis
ENSPFOG00000018357	npm1b	50	48.428	ENSSPUG00000017271	-	73	50.000	Sphenodon_punctatus
ENSPFOG00000018357	npm1b	100	76.589	ENSSPAG00000011152	npm1b	100	78.595	Stegastes_partitus
ENSPFOG00000018357	npm1b	93	40.972	ENSTGUG00000014970	-	100	42.561	Taeniopygia_guttata
ENSPFOG00000018357	npm1b	100	70.764	ENSTRUG00000008105	npm1b	95	70.100	Takifugu_rubripes
ENSPFOG00000018357	npm1b	99	68.439	ENSTNIG00000013057	npm1b	100	68.439	Tetraodon_nigroviridis
ENSPFOG00000018357	npm1b	99	41.083	ENSXETG00000008403	npm1	100	41.720	Xenopus_tropicalis
ENSPFOG00000018357	npm1b	100	96.296	ENSXMAG00000001986	npm1b	100	96.296	Xiphophorus_maculatus