EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000018653 (Gene tree)
Gene ID: 103156185
Gene Symbol: dkc1
Alias: -
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 8123 bases
Position: chrKI520078.1:320507-328629
Accession: 103156185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000018771	TruB_N	PF01509.18	6.5e-20	1	1
ENSPFOP00000018771	PUA	PF01472.20	4.9e-17	1	1
ENSPFOP00000018771	DKCLD	PF08068.12	3.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000018793	-	2215	-	ENSPFOP00000018771	500 (aa)	XP_007578215	A0A087YL68

Gene Model

Click here to download ENSPFOG00000018653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000018653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000018653	dkc1	86	80.952	ENSG00000130826	DKC1	99	87.805	Homo_sapiens
ENSPFOG00000018653	dkc1	97	87.959	ENSAPOG00000007799	dkc1	89	90.044	Acanthochromis_polyacanthus
ENSPFOG00000018653	dkc1	85	81.693	ENSAMEG00000002776	DKC1	86	81.693	Ailuropoda_melanoleuca
ENSPFOG00000018653	dkc1	93	88.387	ENSACIG00000022614	dkc1	87	90.278	Amphilophus_citrinellus
ENSPFOG00000018653	dkc1	97	87.347	ENSAOCG00000013159	dkc1	88	90.741	Amphiprion_ocellaris
ENSPFOG00000018653	dkc1	97	87.347	ENSAPEG00000002284	dkc1	88	90.741	Amphiprion_percula
ENSPFOG00000018653	dkc1	93	86.837	ENSATEG00000013682	dkc1	86	87.982	Anabas_testudineus
ENSPFOG00000018653	dkc1	86	82.151	ENSACAG00000015600	DKC1	75	82.151	Anolis_carolinensis
ENSPFOG00000018653	dkc1	86	80.952	ENSANAG00000022732	DKC1	86	80.952	Aotus_nancymaae
ENSPFOG00000018653	dkc1	92	87.716	ENSACLG00000015605	dkc1	88	89.171	Astatotilapia_calliptera
ENSPFOG00000018653	dkc1	90	85.275	ENSAMXG00000017108	dkc1	85	87.037	Astyanax_mexicanus
ENSPFOG00000018653	dkc1	85	81.050	ENSBTAG00000013045	DKC1	88	80.180	Bos_taurus
ENSPFOG00000018653	dkc1	81	64.619	WBGene00010478	K01G5.5	97	61.432	Caenorhabditis_elegans
ENSPFOG00000018653	dkc1	85	81.136	ENSCJAG00000004210	DKC1	85	81.136	Callithrix_jacchus
ENSPFOG00000018653	dkc1	88	71.493	ENSCAFG00000009311	-	95	67.629	Canis_familiaris
ENSPFOG00000018653	dkc1	89	79.195	ENSCAFG00000019620	-	80	83.738	Canis_familiaris
ENSPFOG00000018653	dkc1	85	71.560	ENSCAFG00020009379	-	83	71.560	Canis_lupus_dingo
ENSPFOG00000018653	dkc1	89	79.195	ENSCAFG00020008918	-	80	83.738	Canis_lupus_dingo
ENSPFOG00000018653	dkc1	85	81.050	ENSCHIG00000017392	DKC1	88	80.180	Capra_hircus
ENSPFOG00000018653	dkc1	86	79.157	ENSTSYG00000007681	DKC1	89	77.516	Carlito_syrichta
ENSPFOG00000018653	dkc1	79	82.064	ENSCAPG00000003342	DKC1	91	82.836	Cavia_aperea
ENSPFOG00000018653	dkc1	85	81.922	ENSCPOG00000008825	DKC1	85	81.922	Cavia_porcellus
ENSPFOG00000018653	dkc1	93	68.908	ENSCCAG00000027418	DKC1	84	71.429	Cebus_capucinus
ENSPFOG00000018653	dkc1	86	80.499	ENSCATG00000033602	DKC1	86	80.499	Cercocebus_atys
ENSPFOG00000018653	dkc1	85	80.866	ENSCLAG00000000720	DKC1	88	80.000	Chinchilla_lanigera
ENSPFOG00000018653	dkc1	86	80.726	ENSCSAG00000006706	DKC1	86	80.726	Chlorocebus_sabaeus
ENSPFOG00000018653	dkc1	85	81.524	ENSCPBG00000005858	DKC1	86	85.222	Chrysemys_picta_bellii
ENSPFOG00000018653	dkc1	80	79.699	ENSCING00000004599	-	83	75.917	Ciona_intestinalis
ENSPFOG00000018653	dkc1	78	80.307	ENSCSAVG00000010047	-	88	79.241	Ciona_savignyi
ENSPFOG00000018653	dkc1	86	80.726	ENSCANG00000027987	DKC1	86	80.726	Colobus_angolensis_palliatus
ENSPFOG00000018653	dkc1	86	80.952	ENSCGRG00001014574	-	86	80.952	Cricetulus_griseus_chok1gshd
ENSPFOG00000018653	dkc1	77	65.885	ENSCGRG00001016789	-	79	66.577	Cricetulus_griseus_chok1gshd
ENSPFOG00000018653	dkc1	86	80.952	ENSCGRG00000016075	-	86	80.952	Cricetulus_griseus_crigri
ENSPFOG00000018653	dkc1	98	55.193	ENSCGRG00000014809	-	87	59.028	Cricetulus_griseus_crigri
ENSPFOG00000018653	dkc1	93	86.724	ENSCSEG00000012633	dkc1	90	87.991	Cynoglossus_semilaevis
ENSPFOG00000018653	dkc1	97	93.196	ENSCVAG00000010155	dkc1	94	92.324	Cyprinodon_variegatus
ENSPFOG00000018653	dkc1	86	89.815	ENSDARG00000016484	dkc1	87	88.662	Danio_rerio
ENSPFOG00000018653	dkc1	86	80.726	ENSDNOG00000004218	DKC1	86	80.726	Dasypus_novemcinctus
ENSPFOG00000018653	dkc1	59	69.333	ENSDORG00000013566	-	91	71.480	Dipodomys_ordii
ENSPFOG00000018653	dkc1	86	68.037	FBgn0259937	Nop60B	88	68.000	Drosophila_melanogaster
ENSPFOG00000018653	dkc1	85	78.458	ENSETEG00000016095	DKC1	90	78.458	Echinops_telfairi
ENSPFOG00000018653	dkc1	66	76.900	ENSEBUG00000015962	dkc1	98	81.100	Eptatretus_burgeri
ENSPFOG00000018653	dkc1	85	78.571	ENSEASG00005007484	DKC1	86	78.571	Equus_asinus_asinus
ENSPFOG00000018653	dkc1	85	78.571	ENSECAG00000023524	DKC1	86	78.571	Equus_caballus
ENSPFOG00000018653	dkc1	78	86.445	ENSEEUG00000003323	DKC1	99	81.840	Erinaceus_europaeus
ENSPFOG00000018653	dkc1	90	87.965	ENSELUG00000014538	dkc1	90	87.965	Esox_lucius
ENSPFOG00000018653	dkc1	84	80.920	ENSFCAG00000006577	DKC1	86	80.920	Felis_catus
ENSPFOG00000018653	dkc1	85	81.963	ENSFALG00000011496	DKC1	86	80.889	Ficedula_albicollis
ENSPFOG00000018653	dkc1	94	76.033	ENSFDAG00000002516	DKC1	94	76.082	Fukomys_damarensis
ENSPFOG00000018653	dkc1	89	94.855	ENSFHEG00000004627	dkc1	90	94.667	Fundulus_heteroclitus
ENSPFOG00000018653	dkc1	78	89.514	ENSGMOG00000017277	dkc1	100	89.514	Gadus_morhua
ENSPFOG00000018653	dkc1	84	83.256	ENSGALG00000005054	DKC1	86	81.348	Gallus_gallus
ENSPFOG00000018653	dkc1	100	98.400	ENSGAFG00000011486	dkc1	86	98.400	Gambusia_affinis
ENSPFOG00000018653	dkc1	80	93.467	ENSGACG00000004373	dkc1	96	94.225	Gasterosteus_aculeatus
ENSPFOG00000018653	dkc1	85	82.217	ENSGAGG00000011330	DKC1	84	82.448	Gopherus_agassizii
ENSPFOG00000018653	dkc1	86	80.952	ENSGGOG00000001045	DKC1	86	80.952	Gorilla_gorilla
ENSPFOG00000018653	dkc1	95	90.188	ENSHBUG00000012436	dkc1	90	90.487	Haplochromis_burtoni
ENSPFOG00000018653	dkc1	80	85.500	ENSHGLG00000000649	DKC1	85	80.135	Heterocephalus_glaber_female
ENSPFOG00000018653	dkc1	80	85.500	ENSHGLG00100001153	DKC1	86	80.135	Heterocephalus_glaber_male
ENSPFOG00000018653	dkc1	96	86.515	ENSHCOG00000021099	dkc1	88	88.839	Hippocampus_comes
ENSPFOG00000018653	dkc1	89	85.120	ENSIPUG00000010309	dkc1	85	85.973	Ictalurus_punctatus
ENSPFOG00000018653	dkc1	86	80.090	ENSSTOG00000001074	-	91	80.090	Ictidomys_tridecemlineatus
ENSPFOG00000018653	dkc1	86	69.300	ENSSTOG00000011904	-	82	69.300	Ictidomys_tridecemlineatus
ENSPFOG00000018653	dkc1	86	74.014	ENSSTOG00000020149	-	85	74.014	Ictidomys_tridecemlineatus
ENSPFOG00000018653	dkc1	56	71.942	ENSJJAG00000010086	-	92	71.942	Jaculus_jaculus
ENSPFOG00000018653	dkc1	90	90.179	ENSKMAG00000008010	dkc1	90	89.800	Kryptolebias_marmoratus
ENSPFOG00000018653	dkc1	91	90.330	ENSLBEG00000019122	dkc1	93	88.962	Labrus_bergylta
ENSPFOG00000018653	dkc1	86	81.336	ENSLACG00000014025	DKC1	90	86.364	Latimeria_chalumnae
ENSPFOG00000018653	dkc1	90	86.813	ENSLOCG00000013713	dkc1	88	89.387	Lepisosteus_oculatus
ENSPFOG00000018653	dkc1	85	80.952	ENSLAFG00000000221	DKC1	87	80.089	Loxodonta_africana
ENSPFOG00000018653	dkc1	86	80.769	ENSMFAG00000032398	DKC1	74	80.769	Macaca_fascicularis
ENSPFOG00000018653	dkc1	86	80.726	ENSMMUG00000005768	DKC1	86	80.726	Macaca_mulatta
ENSPFOG00000018653	dkc1	86	80.726	ENSMNEG00000034503	DKC1	86	80.726	Macaca_nemestrina
ENSPFOG00000018653	dkc1	86	80.726	ENSMLEG00000034422	DKC1	86	80.726	Mandrillus_leucophaeus
ENSPFOG00000018653	dkc1	82	93.932	ENSMAMG00000005427	dkc1	91	94.568	Mastacembelus_armatus
ENSPFOG00000018653	dkc1	95	90.397	ENSMZEG00005014503	dkc1	90	90.708	Maylandia_zebra
ENSPFOG00000018653	dkc1	76	85.897	ENSMGAG00000009238	DKC1	89	83.212	Meleagris_gallopavo
ENSPFOG00000018653	dkc1	55	71.480	ENSMAUG00000016454	-	91	71.480	Mesocricetus_auratus
ENSPFOG00000018653	dkc1	80	84.750	ENSMICG00000038751	-	80	84.750	Microcebus_murinus
ENSPFOG00000018653	dkc1	79	73.350	ENSMICG00000002818	-	99	76.099	Microcebus_murinus
ENSPFOG00000018653	dkc1	55	69.314	ENSMOCG00000001169	-	91	69.314	Microtus_ochrogaster
ENSPFOG00000018653	dkc1	84	90.758	ENSMMOG00000020348	dkc1	88	91.646	Mola_mola
ENSPFOG00000018653	dkc1	80	85.714	ENSMODG00000009243	DKC1	69	86.146	Monodelphis_domestica
ENSPFOG00000018653	dkc1	88	91.364	ENSMALG00000009454	dkc1	85	91.244	Monopterus_albus
ENSPFOG00000018653	dkc1	86	69.196	MGP_CAROLIEiJ_G0033191	Dkc1	86	81.102	Mus_caroli
ENSPFOG00000018653	dkc1	85	80.638	ENSMUSG00000031403	Dkc1	86	80.638	Mus_musculus
ENSPFOG00000018653	dkc1	84	81.193	MGP_PahariEiJ_G0031735	Dkc1	85	81.193	Mus_pahari
ENSPFOG00000018653	dkc1	85	80.638	MGP_SPRETEiJ_G0034351	Dkc1	86	80.638	Mus_spretus
ENSPFOG00000018653	dkc1	92	78.043	ENSMPUG00000016136	DKC1	84	77.778	Mustela_putorius_furo
ENSPFOG00000018653	dkc1	89	75.803	ENSMLUG00000011918	DKC1	89	75.803	Myotis_lucifugus
ENSPFOG00000018653	dkc1	55	71.841	ENSNGAG00000015724	-	92	71.841	Nannospalax_galili
ENSPFOG00000018653	dkc1	79	95.960	ENSNBRG00000005638	dkc1	80	95.960	Neolamprologus_brichardi
ENSPFOG00000018653	dkc1	86	80.726	ENSNLEG00000014323	DKC1	86	80.726	Nomascus_leucogenys
ENSPFOG00000018653	dkc1	81	81.931	ENSMEUG00000001066	DKC1	96	76.484	Notamacropus_eugenii
ENSPFOG00000018653	dkc1	70	79.310	ENSOPRG00000005248	DKC1	69	79.310	Ochotona_princeps
ENSPFOG00000018653	dkc1	55	71.480	ENSODEG00000000549	-	91	71.480	Octodon_degus
ENSPFOG00000018653	dkc1	80	87.250	ENSODEG00000011816	-	86	82.609	Octodon_degus
ENSPFOG00000018653	dkc1	93	90.578	ENSONIG00000013889	dkc1	86	92.379	Oreochromis_niloticus
ENSPFOG00000018653	dkc1	56	63.576	ENSOANG00000022295	-	86	62.783	Ornithorhynchus_anatinus
ENSPFOG00000018653	dkc1	84	83.683	ENSOANG00000008713	-	90	82.798	Ornithorhynchus_anatinus
ENSPFOG00000018653	dkc1	85	80.000	ENSOCUG00000012646	DKC1	86	80.000	Oryctolagus_cuniculus
ENSPFOG00000018653	dkc1	91	86.652	ENSORLG00000018748	dkc1	85	87.760	Oryzias_latipes
ENSPFOG00000018653	dkc1	89	88.090	ENSOMEG00000005786	dkc1	82	90.377	Oryzias_melastigma
ENSPFOG00000018653	dkc1	86	78.714	ENSOGAG00000003399	DKC1	86	78.714	Otolemur_garnettii
ENSPFOG00000018653	dkc1	85	81.279	ENSOARG00000003047	DKC1	88	80.405	Ovis_aries
ENSPFOG00000018653	dkc1	85	80.682	ENSPPAG00000023820	DKC1	86	81.179	Pan_paniscus
ENSPFOG00000018653	dkc1	84	80.920	ENSPPRG00000009104	DKC1	86	80.920	Panthera_pardus
ENSPFOG00000018653	dkc1	84	82.979	ENSPTIG00000017469	DKC1	85	82.979	Panthera_tigris_altaica
ENSPFOG00000018653	dkc1	86	80.952	ENSPTRG00000022449	DKC1	86	80.952	Pan_troglodytes
ENSPFOG00000018653	dkc1	86	80.952	ENSPTRG00000043416	-	74	80.952	Pan_troglodytes
ENSPFOG00000018653	dkc1	86	80.726	ENSPANG00000011978	DKC1	86	80.726	Papio_anubis
ENSPFOG00000018653	dkc1	86	86.636	ENSPKIG00000008443	dkc1	92	86.239	Paramormyrops_kingsleyae
ENSPFOG00000018653	dkc1	72	88.827	ENSPSIG00000013765	DKC1	86	88.827	Pelodiscus_sinensis
ENSPFOG00000018653	dkc1	93	78.261	ENSPMGG00000004097	dkc1	73	87.626	Periophthalmus_magnuspinnatus
ENSPFOG00000018653	dkc1	65	85.135	ENSPEMG00000013348	Dkc1	83	84.916	Peromyscus_maniculatus_bairdii
ENSPFOG00000018653	dkc1	80	86.466	ENSPCIG00000016706	DKC1	67	86.466	Phascolarctos_cinereus
ENSPFOG00000018653	dkc1	100	100.000	ENSPLAG00000003272	dkc1	90	100.000	Poecilia_latipinna
ENSPFOG00000018653	dkc1	100	99.400	ENSPMEG00000010413	dkc1	100	99.400	Poecilia_mexicana
ENSPFOG00000018653	dkc1	100	99.200	ENSPREG00000004100	dkc1	94	96.050	Poecilia_reticulata
ENSPFOG00000018653	dkc1	86	80.952	ENSPPYG00000020892	DKC1	86	80.952	Pongo_abelii
ENSPFOG00000018653	dkc1	75	85.561	ENSPCAG00000015034	DKC1	73	85.561	Procavia_capensis
ENSPFOG00000018653	dkc1	86	80.045	ENSPCOG00000026874	DKC1	86	80.045	Propithecus_coquereli
ENSPFOG00000018653	dkc1	86	81.439	ENSPVAG00000009222	DKC1	86	81.439	Pteropus_vampyrus
ENSPFOG00000018653	dkc1	92	87.712	ENSPNYG00000020063	dkc1	88	88.764	Pundamilia_nyererei
ENSPFOG00000018653	dkc1	87	85.747	ENSPNAG00000005780	dkc1	86	86.143	Pygocentrus_nattereri
ENSPFOG00000018653	dkc1	89	76.344	ENSRNOG00000055562	Dkc1	86	78.231	Rattus_norvegicus
ENSPFOG00000018653	dkc1	86	80.726	ENSRBIG00000028457	DKC1	74	80.726	Rhinopithecus_bieti
ENSPFOG00000018653	dkc1	86	80.726	ENSRROG00000044780	DKC1	86	80.726	Rhinopithecus_roxellana
ENSPFOG00000018653	dkc1	79	70.127	YLR175W	-	85	67.143	Saccharomyces_cerevisiae
ENSPFOG00000018653	dkc1	86	80.952	ENSSBOG00000033746	DKC1	85	80.952	Saimiri_boliviensis_boliviensis
ENSPFOG00000018653	dkc1	86	80.690	ENSSHAG00000002463	DKC1	92	80.690	Sarcophilus_harrisii
ENSPFOG00000018653	dkc1	89	85.088	ENSSFOG00015009585	dkc1	85	86.667	Scleropages_formosus
ENSPFOG00000018653	dkc1	90	87.665	ENSSMAG00000002552	dkc1	89	87.665	Scophthalmus_maximus
ENSPFOG00000018653	dkc1	93	89.032	ENSSDUG00000009963	dkc1	90	90.287	Seriola_dumerili
ENSPFOG00000018653	dkc1	93	87.716	ENSSLDG00000019342	dkc1	87	90.300	Seriola_lalandi_dorsalis
ENSPFOG00000018653	dkc1	85	75.854	ENSSARG00000001822	DKC1	87	76.659	Sorex_araneus
ENSPFOG00000018653	dkc1	83	83.373	ENSSPUG00000018907	DKC1	87	78.947	Sphenodon_punctatus
ENSPFOG00000018653	dkc1	93	89.079	ENSSPAG00000002585	dkc1	82	90.762	Stegastes_partitus
ENSPFOG00000018653	dkc1	79	85.894	ENSSSCG00000012823	DKC1	88	81.754	Sus_scrofa
ENSPFOG00000018653	dkc1	89	78.166	ENSTGUG00000006781	DKC1	99	78.821	Taeniopygia_guttata
ENSPFOG00000018653	dkc1	95	84.615	ENSTRUG00000004413	dkc1	90	88.444	Takifugu_rubripes
ENSPFOG00000018653	dkc1	90	70.410	ENSTNIG00000002582	dkc1	91	70.323	Tetraodon_nigroviridis
ENSPFOG00000018653	dkc1	57	80.936	ENSTBEG00000011262	DKC1	85	80.259	Tupaia_belangeri
ENSPFOG00000018653	dkc1	55	85.921	ENSTTRG00000008089	DKC1	55	85.921	Tursiops_truncatus
ENSPFOG00000018653	dkc1	94	76.858	ENSUAMG00000022721	DKC1	89	82.227	Ursus_americanus
ENSPFOG00000018653	dkc1	94	76.433	ENSUMAG00000016899	DKC1	96	84.518	Ursus_maritimus
ENSPFOG00000018653	dkc1	90	65.111	ENSVVUG00000021671	-	76	69.830	Vulpes_vulpes
ENSPFOG00000018653	dkc1	89	78.194	ENSVVUG00000020734	-	72	82.339	Vulpes_vulpes
ENSPFOG00000018653	dkc1	98	79.430	ENSXETG00000032517	DKC1	91	81.489	Xenopus_tropicalis
ENSPFOG00000018653	dkc1	94	94.456	ENSXCOG00000005498	dkc1	93	95.632	Xiphophorus_couchianus
ENSPFOG00000018653	dkc1	100	97.600	ENSXMAG00000004919	dkc1	100	97.600	Xiphophorus_maculatus