EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000018999 (Gene tree)
Gene ID: 103135399
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein MEX3B
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 7067 bases
Position: chrKI519635.1:1679119-1686185
Accession: 103135399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000019110	KH_1	PF00013.29	1.5e-25	1	2
ENSPFOP00000019110	KH_1	PF00013.29	1.5e-25	2	2
ENSPFOP00000029213	KH_1	PF00013.29	1.8e-25	1	2
ENSPFOP00000029213	KH_1	PF00013.29	1.8e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000028021	-	2262	-	ENSPFOP00000029213	623 (aa)	-	A0A096MCS2
ENSPFOT00000019132	-	2349	-	ENSPFOP00000019110	680 (aa)	XP_007548156	A0A087YM57

Gene Model

Click here to download ENSPFOG00000018999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000018999's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000018999	-	78	46.168	ENSPFOG00000013402	MEX3D	96	44.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000018999	-	76	54.167	ENSAPOG00000006457	mex3b	97	52.391	Acanthochromis_polyacanthus
ENSPFOG00000018999	-	99	83.117	ENSAPOG00000024248	-	100	83.405	Acanthochromis_polyacanthus
ENSPFOG00000018999	-	71	78.161	ENSACIG00000005655	-	95	71.455	Amphilophus_citrinellus
ENSPFOG00000018999	-	76	54.262	ENSACIG00000017783	mex3b	89	52.083	Amphilophus_citrinellus
ENSPFOG00000018999	-	81	51.663	ENSAOCG00000023903	mex3b	91	50.586	Amphiprion_ocellaris
ENSPFOG00000018999	-	99	82.973	ENSAOCG00000021347	-	100	83.550	Amphiprion_ocellaris
ENSPFOG00000018999	-	99	82.828	ENSAPEG00000003579	-	100	83.405	Amphiprion_percula
ENSPFOG00000018999	-	81	51.859	ENSAPEG00000000263	mex3b	91	50.586	Amphiprion_percula
ENSPFOG00000018999	-	76	52.408	ENSATEG00000012352	mex3b	91	52.060	Anabas_testudineus
ENSPFOG00000018999	-	99	76.301	ENSATEG00000015187	-	100	77.168	Anabas_testudineus
ENSPFOG00000018999	-	99	78.120	ENSACLG00000017634	-	100	79.148	Astatotilapia_calliptera
ENSPFOG00000018999	-	76	51.248	ENSACLG00000025776	mex3b	91	50.654	Astatotilapia_calliptera
ENSPFOG00000018999	-	76	52.559	ENSAMXG00000033615	mex3b	90	51.822	Astyanax_mexicanus
ENSPFOG00000018999	-	50	61.981	ENSCPOG00000008241	MEX3B	64	64.333	Cavia_porcellus
ENSPFOG00000018999	-	76	51.462	ENSCPBG00000007809	MEX3B	89	51.072	Chrysemys_picta_bellii
ENSPFOG00000018999	-	87	74.587	ENSCSEG00000006809	-	90	74.376	Cynoglossus_semilaevis
ENSPFOG00000018999	-	73	50.693	ENSCSEG00000005852	mex3b	89	50.097	Cynoglossus_semilaevis
ENSPFOG00000018999	-	100	65.938	ENSCSEG00000011533	-	99	65.844	Cynoglossus_semilaevis
ENSPFOG00000018999	-	100	88.546	ENSCVAG00000006043	-	100	88.106	Cyprinodon_variegatus
ENSPFOG00000018999	-	76	52.918	ENSDARG00000058369	mex3b	90	52.400	Danio_rerio
ENSPFOG00000018999	-	75	51.367	ENSEBUG00000013015	mex3b	65	72.901	Eptatretus_burgeri
ENSPFOG00000018999	-	75	51.753	ENSEBUG00000007080	mex3b	88	52.183	Eptatretus_burgeri
ENSPFOG00000018999	-	76	49.811	ENSELUG00000002503	mex3b	91	49.434	Esox_lucius
ENSPFOG00000018999	-	99	88.321	ENSFHEG00000022740	-	100	89.343	Fundulus_heteroclitus
ENSPFOG00000018999	-	76	67.871	ENSGMOG00000005826	-	100	69.291	Gadus_morhua
ENSPFOG00000018999	-	94	98.279	ENSGAFG00000013694	-	98	98.279	Gambusia_affinis
ENSPFOG00000018999	-	76	72.568	ENSGACG00000007490	-	100	74.319	Gasterosteus_aculeatus
ENSPFOG00000018999	-	76	52.295	ENSGAGG00000022839	MEX3B	89	52.305	Gopherus_agassizii
ENSPFOG00000018999	-	99	78.363	ENSHBUG00000010552	-	100	79.386	Haplochromis_burtoni
ENSPFOG00000018999	-	76	51.056	ENSHBUG00000022683	mex3b	91	50.467	Haplochromis_burtoni
ENSPFOG00000018999	-	76	49.701	ENSHCOG00000007290	mex3b	63	69.549	Hippocampus_comes
ENSPFOG00000018999	-	99	67.244	ENSHCOG00000010812	-	100	67.244	Hippocampus_comes
ENSPFOG00000018999	-	76	50.870	ENSIPUG00000023356	mex3b	90	50.288	Ictalurus_punctatus
ENSPFOG00000018999	-	100	82.895	ENSKMAG00000021181	MEX3B	100	83.721	Kryptolebias_marmoratus
ENSPFOG00000018999	-	87	75.285	ENSLBEG00000007607	-	92	75.733	Labrus_bergylta
ENSPFOG00000018999	-	54	66.327	ENSLBEG00000015131	mex3b	82	64.261	Labrus_bergylta
ENSPFOG00000018999	-	76	50.497	ENSLACG00000015887	MEX3B	90	51.181	Latimeria_chalumnae
ENSPFOG00000018999	-	76	51.445	ENSLOCG00000012858	mex3b	90	50.784	Lepisosteus_oculatus
ENSPFOG00000018999	-	99	77.574	ENSMAMG00000001370	-	100	78.984	Mastacembelus_armatus
ENSPFOG00000018999	-	76	52.124	ENSMAMG00000011325	mex3b	91	51.796	Mastacembelus_armatus
ENSPFOG00000018999	-	76	51.056	ENSMZEG00005003082	mex3b	91	50.467	Maylandia_zebra
ENSPFOG00000018999	-	99	78.120	ENSMZEG00005004908	-	100	79.148	Maylandia_zebra
ENSPFOG00000018999	-	86	74.397	ENSMMOG00000000120	-	100	75.510	Mola_mola
ENSPFOG00000018999	-	73	50.704	ENSMMOG00000015373	mex3b	88	50.513	Mola_mola
ENSPFOG00000018999	-	76	50.190	ENSMALG00000010929	mex3b	70	49.219	Monopterus_albus
ENSPFOG00000018999	-	86	78.738	ENSMALG00000009589	-	92	79.636	Monopterus_albus
ENSPFOG00000018999	-	84	75.376	ENSNBRG00000012485	-	97	74.812	Neolamprologus_brichardi
ENSPFOG00000018999	-	76	51.056	ENSNBRG00000000526	mex3b	89	50.467	Neolamprologus_brichardi
ENSPFOG00000018999	-	50	65.552	ENSODEG00000015600	MEX3B	56	67.110	Octodon_degus
ENSPFOG00000018999	-	84	77.138	ENSONIG00000015037	-	99	78.253	Oreochromis_niloticus
ENSPFOG00000018999	-	76	51.056	ENSONIG00000003391	mex3b	91	50.467	Oreochromis_niloticus
ENSPFOG00000018999	-	76	48.308	ENSOCUG00000011603	MEX3B	91	48.868	Oryctolagus_cuniculus
ENSPFOG00000018999	-	99	79.884	ENSORLG00000004985	-	100	79.595	Oryzias_latipes
ENSPFOG00000018999	-	99	80.087	ENSORLG00020020174	-	100	80.378	Oryzias_latipes_hni
ENSPFOG00000018999	-	99	80.233	ENSORLG00015008649	-	100	80.523	Oryzias_latipes_hsok
ENSPFOG00000018999	-	99	81.686	ENSOMEG00000023339	-	100	81.977	Oryzias_melastigma
ENSPFOG00000018999	-	76	51.154	ENSPKIG00000018385	mex3b	93	49.721	Paramormyrops_kingsleyae
ENSPFOG00000018999	-	76	53.700	ENSPKIG00000019969	-	95	50.797	Paramormyrops_kingsleyae
ENSPFOG00000018999	-	76	51.340	ENSPSIG00000007979	MEX3B	89	51.710	Pelodiscus_sinensis
ENSPFOG00000018999	-	76	52.087	ENSPMGG00000015808	mex3b	91	50.800	Periophthalmus_magnuspinnatus
ENSPFOG00000018999	-	84	69.962	ENSPMGG00000017559	-	97	68.051	Periophthalmus_magnuspinnatus
ENSPFOG00000018999	-	75	42.278	ENSPMAG00000000125	mex3b	99	42.773	Petromyzon_marinus
ENSPFOG00000018999	-	100	99.706	ENSPLAG00000002303	-	100	99.706	Poecilia_latipinna
ENSPFOG00000018999	-	100	99.559	ENSPMEG00000006448	-	100	99.559	Poecilia_mexicana
ENSPFOG00000018999	-	100	97.797	ENSPREG00000018559	-	100	97.797	Poecilia_reticulata
ENSPFOG00000018999	-	76	51.056	ENSPNYG00000019384	mex3b	88	50.467	Pundamilia_nyererei
ENSPFOG00000018999	-	99	78.216	ENSPNYG00000010418	-	100	79.240	Pundamilia_nyererei
ENSPFOG00000018999	-	64	69.123	ENSPNAG00000002109	mex3b	90	68.070	Pygocentrus_nattereri
ENSPFOG00000018999	-	50	66.783	ENSSFOG00015016308	mex3b	69	65.734	Scleropages_formosus
ENSPFOG00000018999	-	76	50.909	ENSSFOG00015016667	mex3b	87	51.111	Scleropages_formosus
ENSPFOG00000018999	-	71	80.000	ENSSMAG00000001075	-	100	82.000	Scophthalmus_maximus
ENSPFOG00000018999	-	76	51.351	ENSSMAG00000017078	mex3b	91	51.229	Scophthalmus_maximus
ENSPFOG00000018999	-	74	52.158	ENSSDUG00000013254	mex3b	91	51.132	Seriola_dumerili
ENSPFOG00000018999	-	99	81.727	ENSSDUG00000022255	-	100	83.165	Seriola_dumerili
ENSPFOG00000018999	-	74	52.158	ENSSLDG00000014620	mex3b	91	51.132	Seriola_lalandi_dorsalis
ENSPFOG00000018999	-	99	80.830	ENSSLDG00000024917	-	100	82.260	Seriola_lalandi_dorsalis
ENSPFOG00000018999	-	76	54.167	ENSSPAG00000011854	mex3b	90	51.775	Stegastes_partitus
ENSPFOG00000018999	-	93	81.364	ENSSPAG00000002581	-	96	82.576	Stegastes_partitus
ENSPFOG00000018999	-	99	74.891	ENSTRUG00000011888	-	100	76.343	Takifugu_rubripes
ENSPFOG00000018999	-	76	52.869	ENSTRUG00000000367	mex3b	92	51.025	Takifugu_rubripes
ENSPFOG00000018999	-	76	54.906	ENSTNIG00000003398	mex3b	90	54.262	Tetraodon_nigroviridis
ENSPFOG00000018999	-	76	52.490	ENSXETG00000027601	mex3b	99	48.968	Xenopus_tropicalis
ENSPFOG00000018999	-	82	87.166	ENSXCOG00000005190	-	99	86.631	Xiphophorus_couchianus
ENSPFOG00000018999	-	100	98.088	ENSXMAG00000015283	-	100	98.088	Xiphophorus_maculatus