EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000019030 (Gene tree)
Gene ID: 103138255
Gene Symbol: rpusd4
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 4768 bases
Position: chrKI519612.1:6861444-6866211
Accession: ZDB-GENE-040801-238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000019143	PseudoU_synth_2	PF00849.22	8.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000019165	-	2516	-	ENSPFOP00000019143	380 (aa)	-	A0A087YM90

Gene Model

Click here to download ENSPFOG00000019030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000019030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000019030	rpusd4	84	51.376	ENSG00000165526	RPUSD4	85	51.376	Homo_sapiens
ENSPFOG00000019030	rpusd4	99	70.712	ENSAPOG00000011024	rpusd4	93	70.712	Acanthochromis_polyacanthus
ENSPFOG00000019030	rpusd4	91	48.857	ENSAMEG00000000127	-	90	48.857	Ailuropoda_melanoleuca
ENSPFOG00000019030	rpusd4	59	55.882	ENSAMEG00000005953	-	96	55.882	Ailuropoda_melanoleuca
ENSPFOG00000019030	rpusd4	87	72.508	ENSACIG00000003533	rpusd4	95	72.508	Amphilophus_citrinellus
ENSPFOG00000019030	rpusd4	99	70.899	ENSAOCG00000015409	rpusd4	92	70.899	Amphiprion_ocellaris
ENSPFOG00000019030	rpusd4	99	70.899	ENSAPEG00000018935	rpusd4	92	70.899	Amphiprion_percula
ENSPFOG00000019030	rpusd4	99	69.867	ENSATEG00000008059	rpusd4	91	69.867	Anabas_testudineus
ENSPFOG00000019030	rpusd4	74	50.000	ENSAPLG00000013250	RPUSD4	98	50.000	Anas_platyrhynchos
ENSPFOG00000019030	rpusd4	91	47.429	ENSACAG00000000189	RPUSD4	93	47.429	Anolis_carolinensis
ENSPFOG00000019030	rpusd4	90	48.563	ENSANAG00000024050	RPUSD4	90	48.563	Aotus_nancymaae
ENSPFOG00000019030	rpusd4	99	71.429	ENSACLG00000020996	rpusd4	95	71.429	Astatotilapia_calliptera
ENSPFOG00000019030	rpusd4	89	57.771	ENSAMXG00000031479	rpusd4	95	57.771	Astyanax_mexicanus
ENSPFOG00000019030	rpusd4	89	49.123	ENSBTAG00000020900	RPUSD4	87	49.123	Bos_taurus
ENSPFOG00000019030	rpusd4	91	48.011	ENSCJAG00000042850	RPUSD4	86	48.011	Callithrix_jacchus
ENSPFOG00000019030	rpusd4	81	52.412	ENSCAFG00000010488	RPUSD4	90	50.000	Canis_familiaris
ENSPFOG00000019030	rpusd4	81	52.412	ENSCAFG00020010621	RPUSD4	90	50.000	Canis_lupus_dingo
ENSPFOG00000019030	rpusd4	87	49.249	ENSCHIG00000009975	RPUSD4	87	48.397	Capra_hircus
ENSPFOG00000019030	rpusd4	91	49.714	ENSTSYG00000008456	RPUSD4	90	49.714	Carlito_syrichta
ENSPFOG00000019030	rpusd4	64	48.178	ENSCAPG00000006040	RPUSD4	93	48.178	Cavia_aperea
ENSPFOG00000019030	rpusd4	95	48.907	ENSCPOG00000014971	RPUSD4	93	48.907	Cavia_porcellus
ENSPFOG00000019030	rpusd4	91	47.727	ENSCCAG00000027838	RPUSD4	92	47.727	Cebus_capucinus
ENSPFOG00000019030	rpusd4	91	48.011	ENSCATG00000041570	RPUSD4	90	48.011	Cercocebus_atys
ENSPFOG00000019030	rpusd4	95	46.547	ENSCLAG00000016553	RPUSD4	94	46.547	Chinchilla_lanigera
ENSPFOG00000019030	rpusd4	91	46.991	ENSCSAG00000002274	RPUSD4	90	46.991	Chlorocebus_sabaeus
ENSPFOG00000019030	rpusd4	71	50.365	ENSCHOG00000010249	RPUSD4	94	50.365	Choloepus_hoffmanni
ENSPFOG00000019030	rpusd4	76	52.921	ENSCPBG00000011175	RPUSD4	99	52.921	Chrysemys_picta_bellii
ENSPFOG00000019030	rpusd4	72	38.790	ENSCSAVG00000000872	-	54	38.790	Ciona_savignyi
ENSPFOG00000019030	rpusd4	91	48.732	ENSCANG00000039684	RPUSD4	90	48.732	Colobus_angolensis_palliatus
ENSPFOG00000019030	rpusd4	90	50.000	ENSCGRG00001024141	Rpusd4	89	50.000	Cricetulus_griseus_chok1gshd
ENSPFOG00000019030	rpusd4	90	50.000	ENSCGRG00000014415	Rpusd4	89	50.000	Cricetulus_griseus_crigri
ENSPFOG00000019030	rpusd4	50	56.316	ENSCSEG00000006462	-	81	56.316	Cynoglossus_semilaevis
ENSPFOG00000019030	rpusd4	100	78.534	ENSCVAG00000008761	rpusd4	96	78.534	Cyprinodon_variegatus
ENSPFOG00000019030	rpusd4	100	78.534	ENSCVAG00000000392	rpusd4	96	80.233	Cyprinodon_variegatus
ENSPFOG00000019030	rpusd4	86	56.970	ENSDARG00000012674	rpusd4	90	56.970	Danio_rerio
ENSPFOG00000019030	rpusd4	88	48.824	ENSDNOG00000020026	RPUSD4	88	48.824	Dasypus_novemcinctus
ENSPFOG00000019030	rpusd4	97	46.505	ENSDORG00000016717	Rpusd4	93	47.043	Dipodomys_ordii
ENSPFOG00000019030	rpusd4	90	50.144	ENSETEG00000013953	RPUSD4	89	50.144	Echinops_telfairi
ENSPFOG00000019030	rpusd4	91	48.295	ENSEASG00005022982	RPUSD4	90	48.295	Equus_asinus_asinus
ENSPFOG00000019030	rpusd4	91	48.580	ENSECAG00000000557	RPUSD4	90	48.580	Equus_caballus
ENSPFOG00000019030	rpusd4	68	55.191	ENSEEUG00000014036	RPUSD4	68	55.191	Erinaceus_europaeus
ENSPFOG00000019030	rpusd4	97	58.511	ENSELUG00000008075	rpusd4	97	58.511	Esox_lucius
ENSPFOG00000019030	rpusd4	91	48.011	ENSFCAG00000029789	RPUSD4	90	48.580	Felis_catus
ENSPFOG00000019030	rpusd4	87	46.386	ENSFALG00000005171	RPUSD4	96	46.386	Ficedula_albicollis
ENSPFOG00000019030	rpusd4	96	48.098	ENSFDAG00000014307	RPUSD4	95	48.098	Fukomys_damarensis
ENSPFOG00000019030	rpusd4	100	81.053	ENSFHEG00000004329	rpusd4	97	81.053	Fundulus_heteroclitus
ENSPFOG00000019030	rpusd4	87	63.636	ENSGMOG00000017726	rpusd4	97	63.473	Gadus_morhua
ENSPFOG00000019030	rpusd4	75	52.613	ENSGALG00000024326	RPUSD4	94	48.235	Gallus_gallus
ENSPFOG00000019030	rpusd4	100	92.632	ENSGAFG00000021559	rpusd4	97	92.632	Gambusia_affinis
ENSPFOG00000019030	rpusd4	89	70.501	ENSGACG00000001657	rpusd4	97	75.269	Gasterosteus_aculeatus
ENSPFOG00000019030	rpusd4	97	48.649	ENSGAGG00000000132	RPUSD4	98	48.649	Gopherus_agassizii
ENSPFOG00000019030	rpusd4	84	51.682	ENSGGOG00000016494	RPUSD4	90	49.858	Gorilla_gorilla
ENSPFOG00000019030	rpusd4	99	71.693	ENSHBUG00000022838	rpusd4	95	71.693	Haplochromis_burtoni
ENSPFOG00000019030	rpusd4	96	48.370	ENSHGLG00000002285	RPUSD4	94	48.370	Heterocephalus_glaber_female
ENSPFOG00000019030	rpusd4	96	48.370	ENSHGLG00100006385	RPUSD4	94	48.370	Heterocephalus_glaber_male
ENSPFOG00000019030	rpusd4	99	66.400	ENSHCOG00000006612	rpusd4	94	66.400	Hippocampus_comes
ENSPFOG00000019030	rpusd4	94	55.402	ENSIPUG00000023879	rusd4	91	55.402	Ictalurus_punctatus
ENSPFOG00000019030	rpusd4	90	50.145	ENSSTOG00000025280	RPUSD4	92	50.145	Ictidomys_tridecemlineatus
ENSPFOG00000019030	rpusd4	91	49.014	ENSJJAG00000018673	Rpusd4	94	49.014	Jaculus_jaculus
ENSPFOG00000019030	rpusd4	99	68.684	ENSKMAG00000021805	rpusd4	95	68.684	Kryptolebias_marmoratus
ENSPFOG00000019030	rpusd4	97	67.866	ENSLBEG00000020394	rpusd4	93	74.405	Labrus_bergylta
ENSPFOG00000019030	rpusd4	87	51.343	ENSLACG00000011028	RPUSD4	87	49.451	Latimeria_chalumnae
ENSPFOG00000019030	rpusd4	98	42.670	ENSLOCG00000003124	rpusd4	99	42.670	Lepisosteus_oculatus
ENSPFOG00000019030	rpusd4	90	50.430	ENSLAFG00000005211	RPUSD4	100	44.108	Loxodonta_africana
ENSPFOG00000019030	rpusd4	91	48.295	ENSMFAG00000039513	RPUSD4	90	48.295	Macaca_fascicularis
ENSPFOG00000019030	rpusd4	91	48.011	ENSMMUG00000007933	RPUSD4	90	48.011	Macaca_mulatta
ENSPFOG00000019030	rpusd4	91	48.580	ENSMNEG00000027414	RPUSD4	90	48.580	Macaca_nemestrina
ENSPFOG00000019030	rpusd4	84	50.459	ENSMLEG00000042461	RPUSD4	85	50.459	Mandrillus_leucophaeus
ENSPFOG00000019030	rpusd4	97	72.011	ENSMAMG00000023839	rpusd4	94	72.011	Mastacembelus_armatus
ENSPFOG00000019030	rpusd4	99	71.429	ENSMZEG00005011999	rpusd4	95	71.429	Maylandia_zebra
ENSPFOG00000019030	rpusd4	74	51.220	ENSMGAG00000000840	RPUSD4	99	47.432	Meleagris_gallopavo
ENSPFOG00000019030	rpusd4	90	49.855	ENSMAUG00000010280	Rpusd4	89	49.855	Mesocricetus_auratus
ENSPFOG00000019030	rpusd4	90	49.138	ENSMICG00000015979	RPUSD4	90	52.941	Microcebus_murinus
ENSPFOG00000019030	rpusd4	87	49.102	ENSMOCG00000000661	Rpusd4	86	49.102	Microtus_ochrogaster
ENSPFOG00000019030	rpusd4	85	71.517	ENSMMOG00000021731	rpusd4	95	71.517	Mola_mola
ENSPFOG00000019030	rpusd4	85	51.682	ENSMODG00000004521	RPUSD4	81	51.682	Monodelphis_domestica
ENSPFOG00000019030	rpusd4	81	72.816	ENSMALG00000005839	rpusd4	98	70.370	Monopterus_albus
ENSPFOG00000019030	rpusd4	89	49.415	MGP_CAROLIEiJ_G0031954	Rpusd4	88	49.415	Mus_caroli
ENSPFOG00000019030	rpusd4	96	48.257	ENSMUSG00000032044	Rpusd4	95	48.257	Mus_musculus
ENSPFOG00000019030	rpusd4	89	49.415	MGP_PahariEiJ_G0014819	Rpusd4	88	49.415	Mus_pahari
ENSPFOG00000019030	rpusd4	89	49.706	MGP_SPRETEiJ_G0033078	Rpusd4	87	49.706	Mus_spretus
ENSPFOG00000019030	rpusd4	91	49.429	ENSMPUG00000006608	RPUSD4	90	49.429	Mustela_putorius_furo
ENSPFOG00000019030	rpusd4	87	49.398	ENSMLUG00000017328	-	85	49.398	Myotis_lucifugus
ENSPFOG00000019030	rpusd4	67	50.000	ENSMLUG00000029348	-	99	50.000	Myotis_lucifugus
ENSPFOG00000019030	rpusd4	90	51.009	ENSNGAG00000020847	Rpusd4	89	51.009	Nannospalax_galili
ENSPFOG00000019030	rpusd4	87	74.398	ENSNBRG00000005207	rpusd4	95	74.398	Neolamprologus_brichardi
ENSPFOG00000019030	rpusd4	91	48.864	ENSNLEG00000007465	RPUSD4	90	48.864	Nomascus_leucogenys
ENSPFOG00000019030	rpusd4	88	51.479	ENSMEUG00000004370	RPUSD4	88	51.479	Notamacropus_eugenii
ENSPFOG00000019030	rpusd4	90	49.275	ENSODEG00000004577	RPUSD4	88	49.275	Octodon_degus
ENSPFOG00000019030	rpusd4	99	72.149	ENSONIG00000018879	rpusd4	95	72.149	Oreochromis_niloticus
ENSPFOG00000019030	rpusd4	77	49.329	ENSOANG00000007247	RPUSD4	95	49.169	Ornithorhynchus_anatinus
ENSPFOG00000019030	rpusd4	97	48.787	ENSOCUG00000017039	RPUSD4	93	48.787	Oryctolagus_cuniculus
ENSPFOG00000019030	rpusd4	94	66.389	ENSORLG00000002750	rpusd4	93	67.908	Oryzias_latipes
ENSPFOG00000019030	rpusd4	97	66.125	ENSORLG00020002044	rpusd4	90	66.125	Oryzias_latipes_hni
ENSPFOG00000019030	rpusd4	97	65.489	ENSORLG00015020034	rpusd4	90	65.489	Oryzias_latipes_hsok
ENSPFOG00000019030	rpusd4	96	69.399	ENSOMEG00000004861	rpusd4	88	69.399	Oryzias_melastigma
ENSPFOG00000019030	rpusd4	87	51.051	ENSOGAG00000008922	RPUSD4	89	50.143	Otolemur_garnettii
ENSPFOG00000019030	rpusd4	87	49.249	ENSOARG00000012238	RPUSD4	87	48.397	Ovis_aries
ENSPFOG00000019030	rpusd4	84	51.376	ENSPPAG00000042883	RPUSD4	84	49.575	Pan_paniscus
ENSPFOG00000019030	rpusd4	91	48.580	ENSPPRG00000003081	RPUSD4	90	48.580	Panthera_pardus
ENSPFOG00000019030	rpusd4	91	48.580	ENSPTIG00000012059	RPUSD4	88	50.799	Panthera_tigris_altaica
ENSPFOG00000019030	rpusd4	84	51.376	ENSPTRG00000004454	RPUSD4	90	49.575	Pan_troglodytes
ENSPFOG00000019030	rpusd4	91	48.295	ENSPANG00000015040	RPUSD4	90	48.295	Papio_anubis
ENSPFOG00000019030	rpusd4	97	53.369	ENSPKIG00000023986	rpusd4	93	53.369	Paramormyrops_kingsleyae
ENSPFOG00000019030	rpusd4	78	52.174	ENSPSIG00000014268	RPUSD4	93	52.174	Pelodiscus_sinensis
ENSPFOG00000019030	rpusd4	90	65.988	ENSPMGG00000002806	rpusd4	94	65.789	Periophthalmus_magnuspinnatus
ENSPFOG00000019030	rpusd4	89	44.152	ENSPEMG00000000278	Rpusd4	87	44.152	Peromyscus_maniculatus_bairdii
ENSPFOG00000019030	rpusd4	81	39.706	ENSPMAG00000008183	rpusd4	97	39.706	Petromyzon_marinus
ENSPFOG00000019030	rpusd4	89	51.613	ENSPCIG00000010212	RPUSD4	91	51.613	Phascolarctos_cinereus
ENSPFOG00000019030	rpusd4	100	98.947	ENSPLAG00000016848	rpusd4	97	98.947	Poecilia_latipinna
ENSPFOG00000019030	rpusd4	100	97.895	ENSPMEG00000017534	rpusd4	97	97.895	Poecilia_mexicana
ENSPFOG00000019030	rpusd4	97	94.054	ENSPREG00000005689	rpusd4	95	94.054	Poecilia_reticulata
ENSPFOG00000019030	rpusd4	91	48.580	ENSPPYG00000004043	RPUSD4	90	48.580	Pongo_abelii
ENSPFOG00000019030	rpusd4	65	56.716	ENSPCAG00000000753	RPUSD4	72	53.514	Procavia_capensis
ENSPFOG00000019030	rpusd4	90	47.989	ENSPCOG00000020694	RPUSD4	90	47.989	Propithecus_coquereli
ENSPFOG00000019030	rpusd4	91	48.424	ENSPVAG00000000988	RPUSD4	90	48.424	Pteropus_vampyrus
ENSPFOG00000019030	rpusd4	99	71.883	ENSPNYG00000009652	rpusd4	95	71.883	Pundamilia_nyererei
ENSPFOG00000019030	rpusd4	94	57.064	ENSPNAG00000012264	rpusd4	93	57.064	Pygocentrus_nattereri
ENSPFOG00000019030	rpusd4	89	50.588	ENSRNOG00000011567	Rpusd4	87	50.588	Rattus_norvegicus
ENSPFOG00000019030	rpusd4	89	48.555	ENSRBIG00000034842	RPUSD4	90	48.011	Rhinopithecus_bieti
ENSPFOG00000019030	rpusd4	89	48.555	ENSRROG00000039753	RPUSD4	90	48.011	Rhinopithecus_roxellana
ENSPFOG00000019030	rpusd4	90	47.262	ENSSBOG00000030413	RPUSD4	90	47.262	Saimiri_boliviensis_boliviensis
ENSPFOG00000019030	rpusd4	78	53.000	ENSSHAG00000008304	RPUSD4	97	53.000	Sarcophilus_harrisii
ENSPFOG00000019030	rpusd4	87	56.757	ENSSFOG00015006203	rpusd4	89	56.757	Scleropages_formosus
ENSPFOG00000019030	rpusd4	98	66.845	ENSSMAG00000020978	rpusd4	94	66.845	Scophthalmus_maximus
ENSPFOG00000019030	rpusd4	99	69.415	ENSSDUG00000013399	rpusd4	95	69.415	Seriola_dumerili
ENSPFOG00000019030	rpusd4	99	69.415	ENSSLDG00000023507	rpusd4	95	69.415	Seriola_lalandi_dorsalis
ENSPFOG00000019030	rpusd4	96	49.051	ENSSPUG00000001401	RPUSD4	98	48.780	Sphenodon_punctatus
ENSPFOG00000019030	rpusd4	99	70.557	ENSSPAG00000012163	rpusd4	95	70.557	Stegastes_partitus
ENSPFOG00000019030	rpusd4	90	48.127	ENSSSCG00000015233	RPUSD4	89	48.127	Sus_scrofa
ENSPFOG00000019030	rpusd4	79	49.338	ENSTGUG00000000773	RPUSD4	99	49.338	Taeniopygia_guttata
ENSPFOG00000019030	rpusd4	98	65.054	ENSTRUG00000012283	rpusd4	93	65.054	Takifugu_rubripes
ENSPFOG00000019030	rpusd4	98	65.252	ENSTNIG00000014676	rpusd4	95	65.252	Tetraodon_nigroviridis
ENSPFOG00000019030	rpusd4	91	48.857	ENSTTRG00000001555	RPUSD4	90	48.857	Tursiops_truncatus
ENSPFOG00000019030	rpusd4	91	49.429	ENSUMAG00000002219	RPUSD4	90	49.429	Ursus_maritimus
ENSPFOG00000019030	rpusd4	63	47.107	ENSVPAG00000001066	RPUSD4	88	47.107	Vicugna_pacos
ENSPFOG00000019030	rpusd4	81	52.412	ENSVVUG00000020101	RPUSD4	90	50.000	Vulpes_vulpes
ENSPFOG00000019030	rpusd4	100	92.368	ENSXCOG00000004676	rpusd4	97	92.368	Xiphophorus_couchianus
ENSPFOG00000019030	rpusd4	100	92.368	ENSXMAG00000023351	rpusd4	97	92.368	Xiphophorus_maculatus