EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000019173 (Gene tree)
Gene ID: 103133919
Gene Symbol: npm1a
Alias: -
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 5855 bases
Position: chrKI519624.1:2098343-2104197
Accession: 103133919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000021611	Nucleoplasmin	PF03066.15	7.6e-33	1	1
ENSPFOP00000019288	Nucleoplasmin	PF03066.15	1.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000019310	-	2377	-	ENSPFOP00000019288	299 (aa)	XP_007545966	A0A087YMN5
ENSPFOT00000026778	-	2359	-	ENSPFOP00000021611	293 (aa)	-	A0A096LR20

Gene Model

Click here to download ENSPFOG00000019173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000019173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000019173	npm1a	97	40.667	ENSPFOG00000018357	npm1b	96	40.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000019173	npm1a	100	68.954	ENSAPOG00000002813	npm1a	100	66.113	Acanthochromis_polyacanthus
ENSPFOG00000019173	npm1a	94	71.886	ENSACIG00000014201	npm1a	100	71.530	Amphilophus_citrinellus
ENSPFOG00000019173	npm1a	89	64.286	ENSAOCG00000004978	npm1a	100	64.286	Amphiprion_ocellaris
ENSPFOG00000019173	npm1a	100	68.092	ENSAPEG00000008594	npm1a	100	68.421	Amphiprion_percula
ENSPFOG00000019173	npm1a	100	68.269	ENSATEG00000008885	npm1a	99	68.506	Anabas_testudineus
ENSPFOG00000019173	npm1a	95	66.667	ENSACLG00000008376	npm1a	94	66.316	Astatotilapia_calliptera
ENSPFOG00000019173	npm1a	99	52.560	ENSAMXG00000010155	npm1a	99	55.137	Astyanax_mexicanus
ENSPFOG00000019173	npm1a	100	56.655	ENSCSEG00000011165	npm1a	96	74.675	Cynoglossus_semilaevis
ENSPFOG00000019173	npm1a	100	71.523	ENSCVAG00000008960	npm1a	100	70.530	Cyprinodon_variegatus
ENSPFOG00000019173	npm1a	98	61.224	ENSDARG00000014329	npm1a	95	69.872	Danio_rerio
ENSPFOG00000019173	npm1a	93	36.000	ENSEBUG00000012753	npm1a	86	36.601	Eptatretus_burgeri
ENSPFOG00000019173	npm1a	100	63.907	ENSELUG00000013705	npm1a	100	63.907	Esox_lucius
ENSPFOG00000019173	npm1a	100	73.422	ENSFHEG00000012496	npm1a	100	73.090	Fundulus_heteroclitus
ENSPFOG00000019173	npm1a	100	85.762	ENSGAFG00000013059	npm1a	100	85.430	Gambusia_affinis
ENSPFOG00000019173	npm1a	99	67.797	ENSGACG00000020319	npm1a	99	66.327	Gasterosteus_aculeatus
ENSPFOG00000019173	npm1a	99	68.770	ENSHBUG00000000776	npm1a	100	68.770	Haplochromis_burtoni
ENSPFOG00000019173	npm1a	100	53.074	ENSHCOG00000001059	npm1a	99	51.645	Hippocampus_comes
ENSPFOG00000019173	npm1a	98	59.539	ENSIPUG00000019452	npm1	99	58.882	Ictalurus_punctatus
ENSPFOG00000019173	npm1a	100	72.575	ENSKMAG00000010709	npm1a	100	69.231	Kryptolebias_marmoratus
ENSPFOG00000019173	npm1a	100	67.763	ENSLBEG00000008793	npm1a	100	66.447	Labrus_bergylta
ENSPFOG00000019173	npm1a	85	52.347	ENSLOCG00000009683	npm1a	100	52.347	Lepisosteus_oculatus
ENSPFOG00000019173	npm1a	100	67.657	ENSMAMG00000009344	npm1a	83	67.657	Mastacembelus_armatus
ENSPFOG00000019173	npm1a	99	66.772	ENSMZEG00005013717	npm1a	100	67.722	Maylandia_zebra
ENSPFOG00000019173	npm1a	95	67.368	ENSMMOG00000007980	npm1a	100	67.368	Mola_mola
ENSPFOG00000019173	npm1a	100	65.686	ENSMALG00000001146	npm1a	100	67.647	Monopterus_albus
ENSPFOG00000019173	npm1a	99	65.938	ENSNBRG00000013172	npm1a	100	64.465	Neolamprologus_brichardi
ENSPFOG00000019173	npm1a	99	65.333	ENSONIG00000001860	npm1a	98	67.110	Oreochromis_niloticus
ENSPFOG00000019173	npm1a	100	67.442	ENSORLG00000010179	npm1a	100	67.110	Oryzias_latipes
ENSPFOG00000019173	npm1a	100	68.333	ENSORLG00020020817	npm1a	100	67.667	Oryzias_latipes_hni
ENSPFOG00000019173	npm1a	100	67.774	ENSORLG00015003439	npm1a	100	67.110	Oryzias_latipes_hsok
ENSPFOG00000019173	npm1a	100	68.771	ENSOMEG00000007083	npm1a	100	66.777	Oryzias_melastigma
ENSPFOG00000019173	npm1a	100	54.369	ENSPKIG00000023943	npm1a	100	54.369	Paramormyrops_kingsleyae
ENSPFOG00000019173	npm1a	100	59.524	ENSPMGG00000011716	npm1a	100	59.524	Periophthalmus_magnuspinnatus
ENSPFOG00000019173	npm1a	100	97.010	ENSPLAG00000001093	npm1a	100	97.010	Poecilia_latipinna
ENSPFOG00000019173	npm1a	100	100.000	ENSPMEG00000012523	npm1a	100	100.000	Poecilia_mexicana
ENSPFOG00000019173	npm1a	100	91.362	ENSPREG00000001647	npm1a	100	90.698	Poecilia_reticulata
ENSPFOG00000019173	npm1a	99	70.192	ENSPNYG00000019321	npm1a	100	70.833	Pundamilia_nyererei
ENSPFOG00000019173	npm1a	99	57.426	ENSPNAG00000026891	npm1a	99	58.940	Pygocentrus_nattereri
ENSPFOG00000019173	npm1a	100	58.224	ENSSFOG00015007074	npm1a	100	57.895	Scleropages_formosus
ENSPFOG00000019173	npm1a	100	67.987	ENSSMAG00000019090	npm1a	100	67.327	Scophthalmus_maximus
ENSPFOG00000019173	npm1a	100	68.977	ENSSDUG00000015609	npm1a	100	69.307	Seriola_dumerili
ENSPFOG00000019173	npm1a	100	69.536	ENSSLDG00000017849	npm1a	100	69.536	Seriola_lalandi_dorsalis
ENSPFOG00000019173	npm1a	100	64.286	ENSSPAG00000021660	npm1a	100	62.585	Stegastes_partitus
ENSPFOG00000019173	npm1a	100	67.532	ENSTRUG00000024003	npm1a	100	68.506	Takifugu_rubripes
ENSPFOG00000019173	npm1a	100	68.000	ENSTNIG00000010773	npm1a	100	66.667	Tetraodon_nigroviridis
ENSPFOG00000019173	npm1a	93	84.452	ENSXCOG00000005958	npm1a	100	82.686	Xiphophorus_couchianus
ENSPFOG00000019173	npm1a	100	88.449	ENSXMAG00000000396	npm1a	100	88.449	Xiphophorus_maculatus