EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPFOG00000019217 (Gene tree)
Gene ID
103147535
Gene Symbol
puf60b
Alias
-
Full Name
poly-U binding splicing factor b
Gene Type
protein_coding
Species
Poecilia_formosa
Status
putative
Strand
Minus strand
Length
14779 bases
Position
chrKI519794.1:98486-113264
Accession
ZDB-GENE-040625-116
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPFOP00000019333RRM_1PF00076.221.1e-4412
ENSPFOP00000019333RRM_1PF00076.221.1e-4422
ENSPFOP00000025543RRM_1PF00076.228.6e-4412
ENSPFOP00000025543RRM_1PF00076.228.6e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPFOT00000019355-2337-ENSPFOP00000019333552 (aa)-A0A087YMT0
ENSPFOT00000028563-2152-ENSPFOP00000025543506 (aa)-A0A096M2A2
Gene Model
Click here to download ENSPFOG00000019217's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000019217's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPFOG00000019217puf60b9979.231ENSPFOG00000011118-10081.250
ENSPFOG00000019217puf60b5832.432ENSPFOG00000013307celf3b5332.323
ENSPFOG00000019217puf60b5337.255ENSPFOG00000006433-6937.255
ENSPFOG00000019217puf60b5336.275ENSPFOG00000010799u2af2a6438.235
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPFOG00000019217puf60b10084.630ENSG00000179950PUF6010084.837Homo_sapiens
ENSPFOG00000019217puf60b9997.222ENSAPOG00000001713puf60b10097.338Acanthochromis_polyacanthus
ENSPFOG00000019217puf60b10080.038ENSAMEG00000006406PUF609381.973Ailuropoda_melanoleuca
ENSPFOG00000019217puf60b9894.737ENSACIG00000021705puf60b10098.051Amphilophus_citrinellus
ENSPFOG00000019217puf60b9876.258ENSACIG00000003263-9977.670Amphilophus_citrinellus
ENSPFOG00000019217puf60b9997.410ENSAOCG00000005395puf60b10097.661Amphiprion_ocellaris
ENSPFOG00000019217puf60b9981.503ENSAOCG00000015558-10083.302Amphiprion_ocellaris
ENSPFOG00000019217puf60b9877.154ENSAPEG00000001836-9978.088Amphiprion_percula
ENSPFOG00000019217puf60b9994.841ENSAPEG00000011923puf60b9994.841Amphiprion_percula
ENSPFOG00000019217puf60b9995.010ENSATEG00000001730puf60b10097.719Anabas_testudineus
ENSPFOG00000019217puf60b9979.576ENSATEG00000006303-10081.973Anabas_testudineus
ENSPFOG00000019217puf60b9982.732ENSAPLG00000010150PUF6010084.820Anas_platyrhynchos
ENSPFOG00000019217puf60b9981.818ENSACAG00000001645PUF609784.091Anolis_carolinensis
ENSPFOG00000019217puf60b9984.510ENSANAG00000018626PUF6010084.645Aotus_nancymaae
ENSPFOG00000019217puf60b9897.984ENSACLG00000004462puf60b10098.051Astatotilapia_calliptera
ENSPFOG00000019217puf60b9987.549ENSAMXG00000036570puf60a9887.747Astyanax_mexicanus
ENSPFOG00000019217puf60b9880.196ENSAMXG00000041030puf60b10081.404Astyanax_mexicanus
ENSPFOG00000019217puf60b10085.019ENSBTAG00000037493PUF6010083.738Bos_taurus
ENSPFOG00000019217puf60b8251.987WBGene00004389rnp-68952.941Caenorhabditis_elegans
ENSPFOG00000019217puf60b10084.630ENSCJAG00000021485PUF6010083.364Callithrix_jacchus
ENSPFOG00000019217puf60b10084.825ENSCAFG00000001400PUF609483.658Canis_familiaris
ENSPFOG00000019217puf60b10084.825ENSCAFG00020018754PUF6010083.551Canis_lupus_dingo
ENSPFOG00000019217puf60b10082.298ENSCHIG00000001618PUF608784.440Capra_hircus
ENSPFOG00000019217puf60b10083.397ENSTSYG00000011912PUF6010085.029Carlito_syrichta
ENSPFOG00000019217puf60b10079.923ENSCPOG00000014613PUF609479.473Cavia_porcellus
ENSPFOG00000019217puf60b10084.825ENSCCAG00000007744PUF6010083.551Cebus_capucinus
ENSPFOG00000019217puf60b10084.630ENSCATG00000035405PUF6010083.364Cercocebus_atys
ENSPFOG00000019217puf60b10084.825ENSCLAG00000009154PUF609384.250Chinchilla_lanigera
ENSPFOG00000019217puf60b9882.726ENSCSAG00000008878PUF6010084.837Chlorocebus_sabaeus
ENSPFOG00000019217puf60b9981.905ENSCPBG00000005595PUF609983.804Chrysemys_picta_bellii
ENSPFOG00000019217puf60b9948.375ENSCING00000008436-9946.904Ciona_intestinalis
ENSPFOG00000019217puf60b6161.994ENSCING00000002156-8762.500Ciona_intestinalis
ENSPFOG00000019217puf60b9553.817ENSCSAVG00000001385-9953.950Ciona_savignyi
ENSPFOG00000019217puf60b9549.482ENSCSAVG00000004765-9748.571Ciona_savignyi
ENSPFOG00000019217puf60b8083.855ENSCANG00000041843PUF6010084.123Colobus_angolensis_palliatus
ENSPFOG00000019217puf60b10085.019ENSCGRG00001017442Puf609384.440Cricetulus_griseus_chok1gshd
ENSPFOG00000019217puf60b10082.298ENSCGRG00000003717Puf609384.440Cricetulus_griseus_crigri
ENSPFOG00000019217puf60b9978.740ENSCSEG00000014845-9079.528Cynoglossus_semilaevis
ENSPFOG00000019217puf60b9994.605ENSCSEG00000019887puf60b9496.970Cynoglossus_semilaevis
ENSPFOG00000019217puf60b9898.992ENSCVAG00000009386puf60b10099.025Cyprinodon_variegatus
ENSPFOG00000019217puf60b8882.960ENSCVAG00000001560-9881.197Cyprinodon_variegatus
ENSPFOG00000019217puf60b9884.393ENSDARG00000032175puf60a9991.925Danio_rerio
ENSPFOG00000019217puf60b9881.373ENSDARG00000001241puf60b9998.413Danio_rerio
ENSPFOG00000019217puf60b9768.288ENSDNOG00000043278PUF609071.206Dasypus_novemcinctus
ENSPFOG00000019217puf60b10085.019ENSDORG00000004585Puf609584.440Dipodomys_ordii
ENSPFOG00000019217puf60b8366.667FBgn0028577hfp7267.843Drosophila_melanogaster
ENSPFOG00000019217puf60b10061.246ENSEBUG00000014291puf60b8462.087Eptatretus_burgeri
ENSPFOG00000019217puf60b9572.577ENSEBUG00000005470-9269.352Eptatretus_burgeri
ENSPFOG00000019217puf60b10084.825ENSEASG00005009695PUF6010083.551Equus_asinus_asinus
ENSPFOG00000019217puf60b10084.825ENSECAG00000024681PUF609884.121Equus_caballus
ENSPFOG00000019217puf60b9984.557ENSELUG00000006507puf60b10085.278Esox_lucius
ENSPFOG00000019217puf60b9888.600ENSELUG00000018443-10087.925Esox_lucius
ENSPFOG00000019217puf60b10084.825ENSFCAG00000001045PUF6010085.029Felis_catus
ENSPFOG00000019217puf60b9973.624ENSFALG00000001136PUF609876.281Ficedula_albicollis
ENSPFOG00000019217puf60b10084.825ENSFDAG00000017177PUF609384.250Fukomys_damarensis
ENSPFOG00000019217puf60b9480.408ENSFHEG00000021687PUF6010083.402Fundulus_heteroclitus
ENSPFOG00000019217puf60b9899.798ENSFHEG00000020046puf60b10099.810Fundulus_heteroclitus
ENSPFOG00000019217puf60b9981.569ENSGMOG00000006392puf60b10082.061Gadus_morhua
ENSPFOG00000019217puf60b6189.504ENSGALG00000039901PUF609390.533Gallus_gallus
ENSPFOG00000019217puf60b9880.723ENSGAFG00000004334-9980.903Gambusia_affinis
ENSPFOG00000019217puf60b10099.638ENSGAFG00000021040puf60b10099.805Gambusia_affinis
ENSPFOG00000019217puf60b9971.012ENSGACG00000001484-10072.179Gasterosteus_aculeatus
ENSPFOG00000019217puf60b9981.310ENSGACG00000004717puf60b9884.393Gasterosteus_aculeatus
ENSPFOG00000019217puf60b9984.646ENSGAGG00000013289PUF609383.396Gopherus_agassizii
ENSPFOG00000019217puf60b10084.630ENSGGOG00000004646PUF6010083.364Gorilla_gorilla
ENSPFOG00000019217puf60b9883.702ENSHBUG00000009634-10083.300Haplochromis_burtoni
ENSPFOG00000019217puf60b9897.984ENSHBUG00000015118puf60b10098.051Haplochromis_burtoni
ENSPFOG00000019217puf60b10084.825ENSHGLG00000006111PUF609384.250Heterocephalus_glaber_female
ENSPFOG00000019217puf60b10084.825ENSHGLG00100012362PUF609384.250Heterocephalus_glaber_male
ENSPFOG00000019217puf60b9892.070ENSHCOG00000015541puf60b10093.071Hippocampus_comes
ENSPFOG00000019217puf60b9665.422ENSHCOG00000000378-9966.102Hippocampus_comes
ENSPFOG00000019217puf60b9985.347ENSIPUG00000002453puf60a9984.950Ictalurus_punctatus
ENSPFOG00000019217puf60b9881.800ENSIPUG00000004660puf60b9981.818Ictalurus_punctatus
ENSPFOG00000019217puf60b10082.109ENSSTOG00000025037PUF609484.250Ictidomys_tridecemlineatus
ENSPFOG00000019217puf60b10085.019ENSJJAG00000001076Puf609384.440Jaculus_jaculus
ENSPFOG00000019217puf60b9875.577ENSKMAG00000010106-10078.352Kryptolebias_marmoratus
ENSPFOG00000019217puf60b9896.101ENSKMAG00000016745puf60b10099.415Kryptolebias_marmoratus
ENSPFOG00000019217puf60b9990.909ENSLBEG00000012505puf60b10094.027Labrus_bergylta
ENSPFOG00000019217puf60b7180.054ENSLACG00000005456PUF6010078.016Latimeria_chalumnae
ENSPFOG00000019217puf60b9985.605ENSLOCG00000010106puf60b10088.636Lepisosteus_oculatus
ENSPFOG00000019217puf60b10081.168ENSLAFG00000022929PUF609483.302Loxodonta_africana
ENSPFOG00000019217puf60b10084.630ENSMFAG00000043373PUF6010083.364Macaca_fascicularis
ENSPFOG00000019217puf60b10084.630ENSMMUG00000013558PUF6010083.364Macaca_mulatta
ENSPFOG00000019217puf60b10084.630ENSMNEG00000031099PUF6010083.364Macaca_nemestrina
ENSPFOG00000019217puf60b9885.516ENSMLEG00000040009PUF6010084.837Mandrillus_leucophaeus
ENSPFOG00000019217puf60b9980.962ENSMAMG00000019476-10082.955Mastacembelus_armatus
ENSPFOG00000019217puf60b9993.605ENSMAMG00000010394puf60b10093.738Mastacembelus_armatus
ENSPFOG00000019217puf60b9897.984ENSMZEG00005018515puf60b10098.051Maylandia_zebra
ENSPFOG00000019217puf60b9980.769ENSMZEG00005019425-10082.353Maylandia_zebra
ENSPFOG00000019217puf60b9982.732ENSMGAG00000013070PUF609390.855Meleagris_gallopavo
ENSPFOG00000019217puf60b6888.385ENSMAUG00000014267-9087.432Mesocricetus_auratus
ENSPFOG00000019217puf60b9471.047ENSMAUG00000018549-9570.287Mesocricetus_auratus
ENSPFOG00000019217puf60b10082.109ENSMICG00000012226PUF6010083.551Microcebus_murinus
ENSPFOG00000019217puf60b10085.019ENSMOCG00000018780Puf609384.440Microtus_ochrogaster
ENSPFOG00000019217puf60b9894.932ENSMMOG00000004217puf60b10098.246Mola_mola
ENSPFOG00000019217puf60b9976.238ENSMMOG00000018059-9976.376Mola_mola
ENSPFOG00000019217puf60b10084.630ENSMODG00000009161PUF609583.463Monodelphis_domestica
ENSPFOG00000019217puf60b9979.576ENSMALG00000000200-10081.214Monopterus_albus
ENSPFOG00000019217puf60b9986.756ENSMALG00000006797puf60b10089.544Monopterus_albus
ENSPFOG00000019217puf60b10085.409MGP_CAROLIEiJ_G0019910Puf609384.820Mus_caroli
ENSPFOG00000019217puf60b10085.409ENSMUSG00000002524Puf609384.820Mus_musculus
ENSPFOG00000019217puf60b10085.409MGP_PahariEiJ_G0019920Puf609384.820Mus_pahari
ENSPFOG00000019217puf60b10085.409MGP_SPRETEiJ_G0020812Puf609384.820Mus_spretus
ENSPFOG00000019217puf60b10081.921ENSMPUG00000008137PUF609284.061Mustela_putorius_furo
ENSPFOG00000019217puf60b9981.373ENSMLUG00000013032-9880.196Myotis_lucifugus
ENSPFOG00000019217puf60b10081.544ENSMLUG00000000238-9383.681Myotis_lucifugus
ENSPFOG00000019217puf60b10085.019ENSNGAG00000000712Puf6010085.221Nannospalax_galili
ENSPFOG00000019217puf60b8291.629ENSNBRG00000013047puf60b9797.362Neolamprologus_brichardi
ENSPFOG00000019217puf60b9980.769ENSNBRG00000017223-10082.353Neolamprologus_brichardi
ENSPFOG00000019217puf60b10084.630ENSNLEG00000002156PUF609884.061Nomascus_leucogenys
ENSPFOG00000019217puf60b6793.863ENSOPRG00000002147PUF607293.863Ochotona_princeps
ENSPFOG00000019217puf60b9660.317ENSODEG00000015513-9762.089Octodon_degus
ENSPFOG00000019217puf60b7188.288ENSODEG00000014024-9188.288Octodon_degus
ENSPFOG00000019217puf60b9980.460ENSONIG00000014030-10081.818Oreochromis_niloticus
ENSPFOG00000019217puf60b9994.626ENSONIG00000006247puf60b9898.073Oreochromis_niloticus
ENSPFOG00000019217puf60b9768.047ENSOANG00000006962PUF609870.099Ornithorhynchus_anatinus
ENSPFOG00000019217puf60b9998.207ENSORLG00000012279puf60b10098.441Oryzias_latipes
ENSPFOG00000019217puf60b9879.960ENSORLG00000028655-9981.888Oryzias_latipes
ENSPFOG00000019217puf60b9980.038ENSORLG00020018144-9981.818Oryzias_latipes_hni
ENSPFOG00000019217puf60b9994.990ENSORLG00020007333puf6010098.441Oryzias_latipes_hni
ENSPFOG00000019217puf60b9980.000ENSORLG00015016833-9981.629Oryzias_latipes_hsok
ENSPFOG00000019217puf60b9994.626ENSORLG00015007718puf60b10098.058Oryzias_latipes_hsok
ENSPFOG00000019217puf60b9982.574ENSOMEG00000022185-9981.784Oryzias_melastigma
ENSPFOG00000019217puf60b9895.161ENSOMEG00000001643puf60b10095.717Oryzias_melastigma
ENSPFOG00000019217puf60b10082.109ENSOGAG00000006259PUF609384.250Otolemur_garnettii
ENSPFOG00000019217puf60b9981.418ENSOARG00000016235PUF609882.634Ovis_aries
ENSPFOG00000019217puf60b10084.630ENSPPAG00000029933PUF6010083.364Pan_paniscus
ENSPFOG00000019217puf60b9885.714ENSPPRG00000003257PUF6010085.029Panthera_pardus
ENSPFOG00000019217puf60b10084.630ENSPTIG00000009795PUF609981.973Panthera_tigris_altaica
ENSPFOG00000019217puf60b10084.630ENSPTRG00000020670PUF6010083.364Pan_troglodytes
ENSPFOG00000019217puf60b10084.630ENSPTRG00000043963-9884.061Pan_troglodytes
ENSPFOG00000019217puf60b10084.630ENSPANG00000021936PUF6010083.364Papio_anubis
ENSPFOG00000019217puf60b9989.349ENSPKIG00000004295puf60a9991.940Paramormyrops_kingsleyae
ENSPFOG00000019217puf60b9989.841ENSPKIG00000012204puf60b10091.033Paramormyrops_kingsleyae
ENSPFOG00000019217puf60b9982.197ENSPSIG00000004679PUF609984.250Pelodiscus_sinensis
ENSPFOG00000019217puf60b9893.413ENSPMGG00000013444puf60b10095.560Periophthalmus_magnuspinnatus
ENSPFOG00000019217puf60b10085.019ENSPEMG00000008820Puf609384.440Peromyscus_maniculatus_bairdii
ENSPFOG00000019217puf60b9984.932ENSPCIG00000020270PUF609983.932Phascolarctos_cinereus
ENSPFOG00000019217puf60b9979.463ENSPLAG00000017025-9281.250Poecilia_latipinna
ENSPFOG00000019217puf60b98100.000ENSPLAG00000010754puf60b100100.000Poecilia_latipinna
ENSPFOG00000019217puf60b100100.000ENSPMEG00000000838puf60b100100.000Poecilia_mexicana
ENSPFOG00000019217puf60b9979.423ENSPMEG00000009767-9281.439Poecilia_mexicana
ENSPFOG00000019217puf60b9897.984ENSPREG00000005440puf60b10097.984Poecilia_reticulata
ENSPFOG00000019217puf60b7583.886ENSPPYG00000018951-9582.464Pongo_abelii
ENSPFOG00000019217puf60b7585.545ENSPCAG00000014837PUF6010084.123Procavia_capensis
ENSPFOG00000019217puf60b10084.630ENSPCOG00000027981PUF6010083.364Propithecus_coquereli
ENSPFOG00000019217puf60b9396.203ENSPVAG00000016167PUF608196.203Pteropus_vampyrus
ENSPFOG00000019217puf60b9980.769ENSPNYG00000004273-10082.353Pundamilia_nyererei
ENSPFOG00000019217puf60b9894.737ENSPNYG00000002556puf60b10098.051Pundamilia_nyererei
ENSPFOG00000019217puf60b9982.635ENSPNAG00000019415puf60b9082.236Pygocentrus_nattereri
ENSPFOG00000019217puf60b9987.525ENSPNAG00000019909puf60a9987.723Pygocentrus_nattereri
ENSPFOG00000019217puf60b10085.409ENSRNOG00000009960Puf609384.820Rattus_norvegicus
ENSPFOG00000019217puf60b10084.630ENSRBIG00000035274PUF6010083.364Rhinopithecus_bieti
ENSPFOG00000019217puf60b10084.630ENSRROG00000029360PUF6010083.364Rhinopithecus_roxellana
ENSPFOG00000019217puf60b9983.236ENSSBOG00000027089PUF609982.176Saimiri_boliviensis_boliviensis
ENSPFOG00000019217puf60b8981.303ENSSHAG00000006668PUF609083.579Sarcophilus_harrisii
ENSPFOG00000019217puf60b9981.868ENSSFOG00015019371puf60a9889.817Scleropages_formosus
ENSPFOG00000019217puf60b9882.669ENSSFOG00015019619puf60b9985.772Scleropages_formosus
ENSPFOG00000019217puf60b7597.980ENSSMAG00000016381puf60b7898.366Scophthalmus_maximus
ENSPFOG00000019217puf60b9879.651ENSSDUG00000007048-9783.789Seriola_dumerili
ENSPFOG00000019217puf60b9894.355ENSSDUG00000009935puf60b9996.415Seriola_dumerili
ENSPFOG00000019217puf60b9995.736ENSSLDG00000024011puf60b10095.825Seriola_lalandi_dorsalis
ENSPFOG00000019217puf60b9881.395ENSSLDG00000007366-9981.766Seriola_lalandi_dorsalis
ENSPFOG00000019217puf60b6278.788ENSSPUG00000013518PUF609278.788Sphenodon_punctatus
ENSPFOG00000019217puf60b9881.359ENSSPAG00000020285-10083.721Stegastes_partitus
ENSPFOG00000019217puf60b9995.155ENSSPAG00000012144puf60b10095.446Stegastes_partitus
ENSPFOG00000019217puf60b10084.825ENSSSCG00000038800PUF609883.725Sus_scrofa
ENSPFOG00000019217puf60b9979.924ENSTGUG00000012797-10082.510Taeniopygia_guttata
ENSPFOG00000019217puf60b9994.767ENSTRUG00000005420puf60b10094.877Takifugu_rubripes
ENSPFOG00000019217puf60b9881.690ENSTRUG00000008843-10081.087Takifugu_rubripes
ENSPFOG00000019217puf60b9976.923ENSTNIG00000003069-9979.576Tetraodon_nigroviridis
ENSPFOG00000019217puf60b9994.038ENSTNIG00000013675puf60b9997.303Tetraodon_nigroviridis
ENSPFOG00000019217puf60b7566.382ENSTBEG00000001899-10067.236Tupaia_belangeri
ENSPFOG00000019217puf60b5686.254ENSTBEG00000002751-9785.911Tupaia_belangeri
ENSPFOG00000019217puf60b9881.574ENSTTRG00000017088PUF6010084.069Tursiops_truncatus
ENSPFOG00000019217puf60b10084.825ENSUAMG00000024917PUF6010083.551Ursus_americanus
ENSPFOG00000019217puf60b10077.213ENSUMAG00000000272PUF609379.127Ursus_maritimus
ENSPFOG00000019217puf60b10084.825ENSVVUG00000022527PUF6010085.029Vulpes_vulpes
ENSPFOG00000019217puf60b9982.874ENSXETG00000012469puf609981.890Xenopus_tropicalis
ENSPFOG00000019217puf60b98100.000ENSXCOG00000012355puf60b100100.000Xiphophorus_couchianus
ENSPFOG00000019217puf60b9981.386ENSXMAG00000010507-9981.188Xiphophorus_maculatus
ENSPFOG00000019217puf60b10099.457ENSXMAG00000001862puf60b100100.000Xiphophorus_maculatus

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