EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000019219 (Gene tree)
Gene ID: 103156144
Gene Symbol: smg7
Alias: -
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 15328 bases
Position: chrKI520076.1:373913-389240
Accession: 103156144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000019343	EST1	PF10374.9	2.2e-24	1	1
ENSPFOP00000019343	EST1_DNA_bind	PF10373.9	2.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000019365	-	5863	XM_007578093	ENSPFOP00000019343	1187 (aa)	XP_007578155	A0A087YMU0

Gene Model

Click here to download ENSPFOG00000019219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000019219's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000019219	smg7	99	62.862	ENSG00000116698	SMG7	86	91.824	Homo_sapiens
ENSPFOG00000019219	smg7	90	87.073	ENSAPOG00000009611	smg7	96	87.073	Acanthochromis_polyacanthus
ENSPFOG00000019219	smg7	99	60.927	ENSAMEG00000002357	SMG7	100	62.606	Ailuropoda_melanoleuca
ENSPFOG00000019219	smg7	97	76.186	ENSACIG00000015152	smg7	100	76.810	Amphilophus_citrinellus
ENSPFOG00000019219	smg7	100	84.775	ENSAOCG00000013538	smg7	100	85.619	Amphiprion_ocellaris
ENSPFOG00000019219	smg7	100	84.788	ENSAPEG00000007851	smg7	100	85.631	Amphiprion_percula
ENSPFOG00000019219	smg7	100	81.645	ENSATEG00000006931	smg7	100	81.728	Anabas_testudineus
ENSPFOG00000019219	smg7	75	64.597	ENSAPLG00000015811	SMG7	99	60.841	Anas_platyrhynchos
ENSPFOG00000019219	smg7	99	63.473	ENSACAG00000014989	SMG7	99	62.908	Anolis_carolinensis
ENSPFOG00000019219	smg7	99	64.498	ENSANAG00000028114	SMG7	85	90.446	Aotus_nancymaae
ENSPFOG00000019219	smg7	100	82.681	ENSACLG00000022079	smg7	100	82.319	Astatotilapia_calliptera
ENSPFOG00000019219	smg7	100	73.895	ENSAMXG00000020809	smg7	100	73.978	Astyanax_mexicanus
ENSPFOG00000019219	smg7	99	62.881	ENSBTAG00000008003	SMG7	99	61.709	Bos_taurus
ENSPFOG00000019219	smg7	99	64.115	ENSCJAG00000005135	SMG7	85	91.613	Callithrix_jacchus
ENSPFOG00000019219	smg7	99	62.314	ENSCAFG00000013276	SMG7	97	61.921	Canis_familiaris
ENSPFOG00000019219	smg7	99	63.547	ENSCAFG00020015475	SMG7	89	87.805	Canis_lupus_dingo
ENSPFOG00000019219	smg7	100	62.911	ENSCHIG00000018192	SMG7	99	62.798	Capra_hircus
ENSPFOG00000019219	smg7	99	62.862	ENSTSYG00000002667	SMG7	80	91.613	Carlito_syrichta
ENSPFOG00000019219	smg7	99	62.387	ENSCPOG00000008906	SMG7	99	61.755	Cavia_porcellus
ENSPFOG00000019219	smg7	99	61.913	ENSCCAG00000028596	SMG7	85	90.446	Cebus_capucinus
ENSPFOG00000019219	smg7	99	63.110	ENSCATG00000011063	SMG7	85	90.446	Cercocebus_atys
ENSPFOG00000019219	smg7	99	63.366	ENSCLAG00000010751	SMG7	99	63.336	Chinchilla_lanigera
ENSPFOG00000019219	smg7	99	63.193	ENSCSAG00000012654	SMG7	97	63.079	Chlorocebus_sabaeus
ENSPFOG00000019219	smg7	87	59.375	ENSCHOG00000010522	SMG7	89	59.375	Choloepus_hoffmanni
ENSPFOG00000019219	smg7	99	65.486	ENSCPBG00000015724	SMG7	99	65.045	Chrysemys_picta_bellii
ENSPFOG00000019219	smg7	99	61.889	ENSCANG00000015680	SMG7	85	90.446	Colobus_angolensis_palliatus
ENSPFOG00000019219	smg7	99	62.675	ENSCGRG00001013705	Smg7	99	62.758	Cricetulus_griseus_chok1gshd
ENSPFOG00000019219	smg7	99	62.469	ENSCGRG00000018401	Smg7	99	62.356	Cricetulus_griseus_crigri
ENSPFOG00000019219	smg7	99	88.663	ENSCVAG00000011842	smg7	100	88.748	Cyprinodon_variegatus
ENSPFOG00000019219	smg7	100	73.605	ENSDARG00000060767	smg7	100	74.148	Danio_rerio
ENSPFOG00000019219	smg7	99	63.101	ENSDORG00000007331	Smg7	99	63.006	Dipodomys_ordii
ENSPFOG00000019219	smg7	97	62.254	ENSETEG00000002654	SMG7	99	62.596	Echinops_telfairi
ENSPFOG00000019219	smg7	99	63.433	ENSEASG00005006524	SMG7	99	63.237	Equus_asinus_asinus
ENSPFOG00000019219	smg7	93	85.970	ENSECAG00000004313	SMG7	97	85.757	Equus_caballus
ENSPFOG00000019219	smg7	97	61.880	ENSEEUG00000002024	SMG7	94	61.591	Erinaceus_europaeus
ENSPFOG00000019219	smg7	100	74.257	ENSELUG00000010293	smg7	100	74.587	Esox_lucius
ENSPFOG00000019219	smg7	99	62.706	ENSFCAG00000010900	SMG7	99	65.865	Felis_catus
ENSPFOG00000019219	smg7	99	62.385	ENSFALG00000003047	SMG7	100	62.636	Ficedula_albicollis
ENSPFOG00000019219	smg7	99	63.289	ENSFDAG00000012121	SMG7	99	62.552	Fukomys_damarensis
ENSPFOG00000019219	smg7	100	85.894	ENSFHEG00000011073	smg7	100	85.894	Fundulus_heteroclitus
ENSPFOG00000019219	smg7	84	79.323	ENSGMOG00000004916	smg7	91	79.323	Gadus_morhua
ENSPFOG00000019219	smg7	91	67.172	ENSGALG00000004667	SMG7	99	61.450	Gallus_gallus
ENSPFOG00000019219	smg7	100	93.608	ENSGAFG00000019000	smg7	100	93.608	Gambusia_affinis
ENSPFOG00000019219	smg7	98	77.882	ENSGACG00000001634	smg7	100	78.138	Gasterosteus_aculeatus
ENSPFOG00000019219	smg7	99	62.862	ENSGGOG00000002342	SMG7	82	89.375	Gorilla_gorilla
ENSPFOG00000019219	smg7	100	82.490	ENSHBUG00000003726	smg7	100	82.319	Haplochromis_burtoni
ENSPFOG00000019219	smg7	99	62.097	ENSHGLG00000009353	SMG7	100	62.972	Heterocephalus_glaber_female
ENSPFOG00000019219	smg7	99	62.015	ENSHGLG00100009637	-	100	61.461	Heterocephalus_glaber_male
ENSPFOG00000019219	smg7	99	57.960	ENSHGLG00100004878	-	99	57.475	Heterocephalus_glaber_male
ENSPFOG00000019219	smg7	100	73.975	ENSIPUG00000016997	smg7	100	73.891	Ictalurus_punctatus
ENSPFOG00000019219	smg7	99	63.184	ENSSTOG00000000401	SMG7	99	63.071	Ictidomys_tridecemlineatus
ENSPFOG00000019219	smg7	99	63.254	ENSJJAG00000012351	Smg7	99	63.140	Jaculus_jaculus
ENSPFOG00000019219	smg7	97	78.504	ENSKMAG00000004900	smg7	100	78.590	Kryptolebias_marmoratus
ENSPFOG00000019219	smg7	62	62.331	ENSLBEG00000005220	-	75	73.534	Labrus_bergylta
ENSPFOG00000019219	smg7	99	78.224	ENSLBEG00000002983	smg7	99	78.727	Labrus_bergylta
ENSPFOG00000019219	smg7	100	65.528	ENSLACG00000000972	SMG7	100	65.714	Latimeria_chalumnae
ENSPFOG00000019219	smg7	99	68.555	ENSLOCG00000002010	smg7	99	68.473	Lepisosteus_oculatus
ENSPFOG00000019219	smg7	99	63.071	ENSLAFG00000008186	SMG7	99	62.781	Loxodonta_africana
ENSPFOG00000019219	smg7	99	63.516	ENSMFAG00000031653	SMG7	85	90.446	Macaca_fascicularis
ENSPFOG00000019219	smg7	99	63.854	ENSMMUG00000018458	SMG7	99	63.742	Macaca_mulatta
ENSPFOG00000019219	smg7	99	62.015	ENSMNEG00000034798	SMG7	85	90.446	Macaca_nemestrina
ENSPFOG00000019219	smg7	99	63.110	ENSMLEG00000037170	SMG7	100	63.714	Mandrillus_leucophaeus
ENSPFOG00000019219	smg7	88	80.961	ENSMAMG00000018733	smg7	86	81.604	Mastacembelus_armatus
ENSPFOG00000019219	smg7	100	82.931	ENSMZEG00005015247	smg7	100	81.660	Maylandia_zebra
ENSPFOG00000019219	smg7	89	66.327	ENSMGAG00000001561	SMG7	99	60.779	Meleagris_gallopavo
ENSPFOG00000019219	smg7	99	63.201	ENSMAUG00000019484	Smg7	99	63.006	Mesocricetus_auratus
ENSPFOG00000019219	smg7	99	64.096	ENSMICG00000007145	SMG7	81	91.613	Microcebus_murinus
ENSPFOG00000019219	smg7	99	62.768	ENSMOCG00000020748	Smg7	99	62.593	Microtus_ochrogaster
ENSPFOG00000019219	smg7	94	85.930	ENSMMOG00000001524	smg7	99	73.808	Mola_mola
ENSPFOG00000019219	smg7	92	61.483	ENSMODG00000007139	SMG7	99	61.752	Monodelphis_domestica
ENSPFOG00000019219	smg7	100	83.041	ENSMALG00000000061	smg7	94	83.375	Monopterus_albus
ENSPFOG00000019219	smg7	99	63.201	MGP_CAROLIEiJ_G0014704	Smg7	99	62.841	Mus_caroli
ENSPFOG00000019219	smg7	99	62.871	ENSMUSG00000042772	Smg7	99	62.758	Mus_musculus
ENSPFOG00000019219	smg7	99	63.119	MGP_PahariEiJ_G0027940	Smg7	99	62.923	Mus_pahari
ENSPFOG00000019219	smg7	99	62.954	MGP_SPRETEiJ_G0015511	Smg7	99	62.841	Mus_spretus
ENSPFOG00000019219	smg7	98	61.881	ENSMPUG00000011732	SMG7	97	61.965	Mustela_putorius_furo
ENSPFOG00000019219	smg7	99	62.748	ENSMLUG00000015417	SMG7	99	62.552	Myotis_lucifugus
ENSPFOG00000019219	smg7	99	62.058	ENSNGAG00000009836	Smg7	100	60.475	Nannospalax_galili
ENSPFOG00000019219	smg7	98	72.950	ENSNBRG00000024343	smg7	99	68.866	Neolamprologus_brichardi
ENSPFOG00000019219	smg7	99	63.027	ENSNLEG00000018018	SMG7	100	63.629	Nomascus_leucogenys
ENSPFOG00000019219	smg7	71	65.341	ENSMEUG00000004681	SMG7	73	65.341	Notamacropus_eugenii
ENSPFOG00000019219	smg7	96	58.298	ENSOPRG00000013942	SMG7	96	58.742	Ochotona_princeps
ENSPFOG00000019219	smg7	99	63.201	ENSODEG00000010390	SMG7	99	63.254	Octodon_degus
ENSPFOG00000019219	smg7	100	79.333	ENSONIG00000000277	smg7	100	79.299	Oreochromis_niloticus
ENSPFOG00000019219	smg7	99	62.000	ENSOANG00000000994	SMG7	100	61.833	Ornithorhynchus_anatinus
ENSPFOG00000019219	smg7	99	61.258	ENSOCUG00000005887	SMG7	93	60.809	Oryctolagus_cuniculus
ENSPFOG00000019219	smg7	100	79.530	ENSORLG00000007314	smg7	100	80.034	Oryzias_latipes
ENSPFOG00000019219	smg7	100	79.614	ENSORLG00020015779	smg7	100	80.117	Oryzias_latipes_hni
ENSPFOG00000019219	smg7	100	79.950	ENSORLG00015012289	smg7	100	79.950	Oryzias_latipes_hsok
ENSPFOG00000019219	smg7	100	80.453	ENSOMEG00000002328	smg7	100	80.117	Oryzias_melastigma
ENSPFOG00000019219	smg7	97	61.662	ENSOGAG00000003107	SMG7	93	61.414	Otolemur_garnettii
ENSPFOG00000019219	smg7	99	62.963	ENSOARG00000001352	SMG7	100	60.434	Ovis_aries
ENSPFOG00000019219	smg7	99	61.932	ENSPPAG00000031619	SMG7	90	87.273	Pan_paniscus
ENSPFOG00000019219	smg7	99	62.305	ENSPPRG00000011222	SMG7	99	61.380	Panthera_pardus
ENSPFOG00000019219	smg7	97	62.997	ENSPTIG00000007242	SMG7	100	62.881	Panthera_tigris_altaica
ENSPFOG00000019219	smg7	99	61.932	ENSPTRG00000001764	SMG7	85	90.446	Pan_troglodytes
ENSPFOG00000019219	smg7	99	63.110	ENSPANG00000004520	SMG7	99	62.097	Papio_anubis
ENSPFOG00000019219	smg7	100	68.136	ENSPKIG00000007242	smg7	100	68.193	Paramormyrops_kingsleyae
ENSPFOG00000019219	smg7	99	64.262	ENSPSIG00000012201	SMG7	99	63.870	Pelodiscus_sinensis
ENSPFOG00000019219	smg7	62	58.081	ENSPMGG00000021833	smg7	92	57.143	Periophthalmus_magnuspinnatus
ENSPFOG00000019219	smg7	99	63.119	ENSPEMG00000011315	Smg7	99	62.923	Peromyscus_maniculatus_bairdii
ENSPFOG00000019219	smg7	99	64.667	ENSPCIG00000003786	SMG7	89	91.250	Phascolarctos_cinereus
ENSPFOG00000019219	smg7	100	95.535	ENSPLAG00000001446	smg7	100	95.535	Poecilia_latipinna
ENSPFOG00000019219	smg7	97	95.304	ENSPMEG00000005218	smg7	99	95.304	Poecilia_mexicana
ENSPFOG00000019219	smg7	88	93.372	ENSPREG00000019039	smg7	92	92.891	Poecilia_reticulata
ENSPFOG00000019219	smg7	99	61.932	ENSPPYG00000000427	SMG7	99	62.015	Pongo_abelii
ENSPFOG00000019219	smg7	95	54.836	ENSPCAG00000008360	SMG7	86	69.651	Procavia_capensis
ENSPFOG00000019219	smg7	99	62.862	ENSPCOG00000011996	SMG7	76	91.613	Propithecus_coquereli
ENSPFOG00000019219	smg7	91	58.840	ENSPVAG00000000851	SMG7	89	59.021	Pteropus_vampyrus
ENSPFOG00000019219	smg7	100	82.529	ENSPNYG00000007643	smg7	100	82.358	Pundamilia_nyererei
ENSPFOG00000019219	smg7	100	74.503	ENSPNAG00000011374	smg7	98	78.680	Pygocentrus_nattereri
ENSPFOG00000019219	smg7	99	63.149	ENSRNOG00000027962	Smg7	99	64.532	Rattus_norvegicus
ENSPFOG00000019219	smg7	99	63.027	ENSRBIG00000036316	SMG7	100	63.629	Rhinopithecus_bieti
ENSPFOG00000019219	smg7	99	63.433	ENSRROG00000035719	SMG7	100	63.629	Rhinopithecus_roxellana
ENSPFOG00000019219	smg7	99	63.162	ENSSBOG00000023454	SMG7	86	91.824	Saimiri_boliviensis_boliviensis
ENSPFOG00000019219	smg7	99	61.838	ENSSHAG00000013147	SMG7	99	61.818	Sarcophilus_harrisii
ENSPFOG00000019219	smg7	100	70.917	ENSSFOG00015017252	smg7	100	70.917	Scleropages_formosus
ENSPFOG00000019219	smg7	100	82.496	ENSSMAG00000006067	smg7	100	81.339	Scophthalmus_maximus
ENSPFOG00000019219	smg7	61	88.154	ENSSDUG00000017543	smg7	100	80.877	Seriola_dumerili
ENSPFOG00000019219	smg7	99	62.026	ENSSPUG00000002064	SMG7	99	61.500	Sphenodon_punctatus
ENSPFOG00000019219	smg7	99	78.057	ENSSPAG00000008733	smg7	99	78.308	Stegastes_partitus
ENSPFOG00000019219	smg7	99	63.154	ENSSSCG00000015558	SMG7	99	63.154	Sus_scrofa
ENSPFOG00000019219	smg7	91	67.513	ENSTGUG00000003928	SMG7	100	61.392	Taeniopygia_guttata
ENSPFOG00000019219	smg7	100	72.727	ENSTNIG00000002802	smg7	100	72.570	Tetraodon_nigroviridis
ENSPFOG00000019219	smg7	78	65.714	ENSTBEG00000003220	SMG7	75	65.714	Tupaia_belangeri
ENSPFOG00000019219	smg7	96	62.403	ENSTTRG00000014778	SMG7	94	62.199	Tursiops_truncatus
ENSPFOG00000019219	smg7	97	58.818	ENSUAMG00000017473	SMG7	100	58.818	Ursus_americanus
ENSPFOG00000019219	smg7	97	61.387	ENSUMAG00000016389	SMG7	100	61.387	Ursus_maritimus
ENSPFOG00000019219	smg7	99	62.717	ENSVVUG00000008976	SMG7	99	65.865	Vulpes_vulpes
ENSPFOG00000019219	smg7	99	57.561	ENSXETG00000012528	smg7	99	57.749	Xenopus_tropicalis
ENSPFOG00000019219	smg7	100	93.429	ENSXMAG00000007123	smg7	100	93.429	Xiphophorus_maculatus