EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000019430 (Gene tree)
Gene ID: 103137664
Gene Symbol: tomm20a
Alias: -
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 54548 bases
Position: chrKI519652.1:2357641-2412188
Accession: 103137664
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000029805	Tudor-knot	PF11717.8	2.7e-10	1	1
ENSPFOP00000019553	Tudor-knot	PF11717.8	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000019575	-	4152	-	ENSPFOP00000019553	1287 (aa)	-	A0A087YNF0
ENSPFOT00000022123	-	8078	-	ENSPFOP00000029805	1295 (aa)	XP_007551569	A0A096MEG4

Gene Model

Click here to download ENSPFOG00000019430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000019430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000019430	tomm20a	85	74.279	ENSG00000054267	ARID4B	89	74.519	Homo_sapiens
ENSPFOG00000019430	tomm20a	100	85.258	ENSAPOG00000010823	tomm20a	100	84.574	Acanthochromis_polyacanthus
ENSPFOG00000019430	tomm20a	93	91.962	ENSACIG00000006313	tomm20a	100	91.962	Amphilophus_citrinellus
ENSPFOG00000019430	tomm20a	100	85.334	ENSAOCG00000003330	tomm20a	100	84.271	Amphiprion_ocellaris
ENSPFOG00000019430	tomm20a	100	85.258	ENSAPEG00000024018	tomm20a	100	84.195	Amphiprion_percula
ENSPFOG00000019430	tomm20a	100	83.689	ENSATEG00000014930	tomm20a	100	83.765	Anabas_testudineus
ENSPFOG00000019430	tomm20a	100	49.856	ENSAPLG00000004422	ARID4B	99	49.927	Anas_platyrhynchos
ENSPFOG00000019430	tomm20a	54	60.815	ENSACAG00000001289	ARID4B	99	52.042	Anolis_carolinensis
ENSPFOG00000019430	tomm20a	54	61.326	ENSANAG00000038088	ARID4B	99	51.198	Aotus_nancymaae
ENSPFOG00000019430	tomm20a	93	81.473	ENSACLG00000023521	tomm20a	100	79.335	Astatotilapia_calliptera
ENSPFOG00000019430	tomm20a	82	90.256	ENSAMXG00000003657	tomm20a	90	76.998	Astyanax_mexicanus
ENSPFOG00000019430	tomm20a	100	51.597	ENSBTAG00000000222	ARID4B	99	51.805	Bos_taurus
ENSPFOG00000019430	tomm20a	54	61.978	ENSCJAG00000018055	ARID4B	99	50.043	Callithrix_jacchus
ENSPFOG00000019430	tomm20a	56	60.411	ENSCAFG00000011439	ARID4B	54	61.506	Canis_familiaris
ENSPFOG00000019430	tomm20a	55	59.834	ENSCAFG00020027130	ARID4B	54	60.931	Canis_lupus_dingo
ENSPFOG00000019430	tomm20a	99	50.885	ENSCPOG00000034766	ARID4B	99	51.156	Cavia_porcellus
ENSPFOG00000019430	tomm20a	55	59.946	ENSCCAG00000021520	ARID4B	54	60.809	Cebus_capucinus
ENSPFOG00000019430	tomm20a	100	51.129	ENSCATG00000042166	ARID4B	99	51.422	Cercocebus_atys
ENSPFOG00000019430	tomm20a	100	50.660	ENSCSAG00000010069	ARID4B	99	51.311	Chlorocebus_sabaeus
ENSPFOG00000019430	tomm20a	100	49.672	ENSCANG00000027498	ARID4B	99	49.888	Colobus_angolensis_palliatus
ENSPFOG00000019430	tomm20a	100	50.840	ENSCGRG00001014397	Arid4b	99	51.345	Cricetulus_griseus_chok1gshd
ENSPFOG00000019430	tomm20a	99	50.805	ENSCGRG00000004910	Arid4b	99	51.311	Cricetulus_griseus_crigri
ENSPFOG00000019430	tomm20a	99	78.224	ENSCSEG00000012928	tomm20a	98	77.101	Cynoglossus_semilaevis
ENSPFOG00000019430	tomm20a	100	87.825	ENSCVAG00000003244	tomm20a	100	87.443	Cyprinodon_variegatus
ENSPFOG00000019430	tomm20a	100	66.081	ENSDARG00000090656	tomm20a	99	65.349	Danio_rerio
ENSPFOG00000019430	tomm20a	99	51.357	ENSDORG00000006422	Arid4b	99	51.154	Dipodomys_ordii
ENSPFOG00000019430	tomm20a	89	57.647	ENSETEG00000005596	ARID4B	93	56.941	Echinops_telfairi
ENSPFOG00000019430	tomm20a	64	55.611	ENSELUG00000018441	tomm20a	91	54.042	Esox_lucius
ENSPFOG00000019430	tomm20a	100	88.464	ENSFHEG00000003798	tomm20a	100	88.388	Fundulus_heteroclitus
ENSPFOG00000019430	tomm20a	90	73.541	ENSGMOG00000018747	tomm20a	91	74.118	Gadus_morhua
ENSPFOG00000019430	tomm20a	99	76.520	ENSGACG00000004298	tomm20a	100	77.110	Gasterosteus_aculeatus
ENSPFOG00000019430	tomm20a	90	69.070	ENSGAGG00000020544	ARID4B	97	50.714	Gopherus_agassizii
ENSPFOG00000019430	tomm20a	100	50.512	ENSGGOG00000022080	ARID4B	99	51.119	Gorilla_gorilla
ENSPFOG00000019430	tomm20a	100	81.465	ENSHBUG00000020369	tomm20a	100	81.617	Haplochromis_burtoni
ENSPFOG00000019430	tomm20a	97	83.043	ENSHCOG00000010376	tomm20a	100	81.957	Hippocampus_comes
ENSPFOG00000019430	tomm20a	100	63.014	ENSIPUG00000014234	arid4b	99	61.668	Ictalurus_punctatus
ENSPFOG00000019430	tomm20a	100	51.262	ENSJJAG00000021368	Arid4b	99	51.371	Jaculus_jaculus
ENSPFOG00000019430	tomm20a	92	73.879	ENSKMAG00000010987	tomm20a	98	78.860	Kryptolebias_marmoratus
ENSPFOG00000019430	tomm20a	100	61.427	ENSLOCG00000015899	tomm20a	99	61.337	Lepisosteus_oculatus
ENSPFOG00000019430	tomm20a	54	61.264	ENSLAFG00000014295	ARID4B	99	50.598	Loxodonta_africana
ENSPFOG00000019430	tomm20a	100	50.587	ENSMFAG00000044016	ARID4B	99	51.311	Macaca_fascicularis
ENSPFOG00000019430	tomm20a	100	50.587	ENSMMUG00000007141	ARID4B	99	51.311	Macaca_mulatta
ENSPFOG00000019430	tomm20a	99	50.479	ENSMLEG00000033583	ARID4B	99	51.317	Mandrillus_leucophaeus
ENSPFOG00000019430	tomm20a	93	82.011	ENSMAMG00000017134	tomm20a	99	81.856	Mastacembelus_armatus
ENSPFOG00000019430	tomm20a	100	81.617	ENSMZEG00005009879	tomm20a	100	81.465	Maylandia_zebra
ENSPFOG00000019430	tomm20a	100	50.536	ENSMGAG00000011896	ARID4B	99	50.627	Meleagris_gallopavo
ENSPFOG00000019430	tomm20a	100	50.845	ENSMICG00000016358	ARID4B	99	51.758	Microcebus_murinus
ENSPFOG00000019430	tomm20a	92	94.667	ENSMMOG00000000561	tomm20a	98	85.371	Mola_mola
ENSPFOG00000019430	tomm20a	100	83.765	ENSMALG00000005205	tomm20a	100	82.698	Monopterus_albus
ENSPFOG00000019430	tomm20a	93	87.736	ENSNBRG00000019684	tomm20a	100	89.858	Neolamprologus_brichardi
ENSPFOG00000019430	tomm20a	100	51.126	ENSNLEG00000002665	ARID4B	99	51.347	Nomascus_leucogenys
ENSPFOG00000019430	tomm20a	100	51.804	ENSODEG00000005373	ARID4B	99	51.683	Octodon_degus
ENSPFOG00000019430	tomm20a	100	78.294	ENSORLG00000012510	tomm20a	100	77.913	Oryzias_latipes
ENSPFOG00000019430	tomm20a	91	85.885	ENSORLG00020013988	tomm20a	100	86.824	Oryzias_latipes_hni
ENSPFOG00000019430	tomm20a	91	86.058	ENSORLG00015022835	tomm20a	100	86.525	Oryzias_latipes_hsok
ENSPFOG00000019430	tomm20a	100	78.839	ENSOMEG00000000521	tomm20a	100	79.068	Oryzias_melastigma
ENSPFOG00000019430	tomm20a	99	52.399	ENSOARG00000003481	ARID4B	97	51.855	Ovis_aries
ENSPFOG00000019430	tomm20a	56	59.623	ENSPPAG00000031651	ARID4B	99	51.230	Pan_paniscus
ENSPFOG00000019430	tomm20a	100	51.592	ENSPPRG00000013739	ARID4B	99	51.937	Panthera_pardus
ENSPFOG00000019430	tomm20a	100	52.458	ENSPTIG00000012520	ARID4B	99	52.727	Panthera_tigris_altaica
ENSPFOG00000019430	tomm20a	100	50.365	ENSPTRG00000002129	ARID4B	99	51.305	Pan_troglodytes
ENSPFOG00000019430	tomm20a	84	45.400	ENSPTRG00000048786	-	95	44.755	Pan_troglodytes
ENSPFOG00000019430	tomm20a	99	50.184	ENSPANG00000013611	ARID4B	99	51.013	Papio_anubis
ENSPFOG00000019430	tomm20a	57	57.682	ENSPMGG00000001596	tomm20a	89	79.070	Periophthalmus_magnuspinnatus
ENSPFOG00000019430	tomm20a	90	75.787	ENSPCIG00000029756	ARID4B	99	51.855	Phascolarctos_cinereus
ENSPFOG00000019430	tomm20a	100	99.228	ENSPLAG00000010554	tomm20a	100	99.228	Poecilia_latipinna
ENSPFOG00000019430	tomm20a	100	97.430	ENSPMEG00000003093	tomm20a	100	97.430	Poecilia_mexicana
ENSPFOG00000019430	tomm20a	100	97.224	ENSPREG00000007996	tomm20a	100	97.224	Poecilia_reticulata
ENSPFOG00000019430	tomm20a	100	50.622	ENSPPYG00000000098	ARID4B	99	51.230	Pongo_abelii
ENSPFOG00000019430	tomm20a	94	53.671	ENSPVAG00000015159	ARID4B	99	50.778	Pteropus_vampyrus
ENSPFOG00000019430	tomm20a	99	76.547	ENSPNYG00000013988	tomm20a	100	76.394	Pundamilia_nyererei
ENSPFOG00000019430	tomm20a	100	66.116	ENSPNAG00000000523	tomm20a	92	65.651	Pygocentrus_nattereri
ENSPFOG00000019430	tomm20a	99	47.584	ENSRBIG00000042029	ARID4B	96	48.434	Rhinopithecus_bieti
ENSPFOG00000019430	tomm20a	100	51.347	ENSRROG00000045203	ARID4B	99	51.461	Rhinopithecus_roxellana
ENSPFOG00000019430	tomm20a	79	51.476	ENSSHAG00000015214	ARID4B	99	50.970	Sarcophilus_harrisii
ENSPFOG00000019430	tomm20a	75	48.761	ENSSFOG00015008923	tomm20a	98	48.975	Scleropages_formosus
ENSPFOG00000019430	tomm20a	100	60.883	ENSSFOG00015000132	arid4b	99	60.793	Scleropages_formosus
ENSPFOG00000019430	tomm20a	100	80.749	ENSSMAG00000010430	tomm20a	100	81.573	Scophthalmus_maximus
ENSPFOG00000019430	tomm20a	100	85.301	ENSSDUG00000003019	tomm20a	100	84.844	Seriola_dumerili
ENSPFOG00000019430	tomm20a	100	84.867	ENSSPAG00000007358	tomm20a	100	83.954	Stegastes_partitus
ENSPFOG00000019430	tomm20a	56	60.548	ENSSSCG00000010156	ARID4B	62	61.978	Sus_scrofa
ENSPFOG00000019430	tomm20a	69	69.357	ENSTRUG00000002893	tomm20a	100	69.029	Takifugu_rubripes
ENSPFOG00000019430	tomm20a	70	69.287	ENSTBEG00000003961	ARID4B	67	69.042	Tupaia_belangeri
ENSPFOG00000019430	tomm20a	100	52.360	ENSTTRG00000002228	ARID4B	99	51.755	Tursiops_truncatus
ENSPFOG00000019430	tomm20a	54	58.403	ENSVVUG00000008154	ARID4B	53	59.058	Vulpes_vulpes
ENSPFOG00000019430	tomm20a	100	96.528	ENSXMAG00000006538	tomm20a	100	96.528	Xiphophorus_maculatus