EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000019841 (Gene tree)
Gene ID: 103149843
Gene Symbol: prdm12b
Alias: -
Full Name: PR domain containing 12b
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 3469 bases
Position: chrKI519616.1:5151439-5154907
Accession: ZDB-GENE-041114-172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000019968	zf-C2H2	PF00096.26	7.4e-13	1	2
ENSPFOP00000019968	zf-C2H2	PF00096.26	7.4e-13	2	2
ENSPFOP00000019968	zf-met	PF12874.7	7.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000019991	-	1245	-	ENSPFOP00000019968	369 (aa)	-	A0A087YPL5

Gene Model

Click here to download ENSPFOG00000019841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000019841's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000019841	prdm12b	68	36.364	ENSPFOG00000018630	prdm5	94	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000019841	prdm12b	93	82.216	ENSG00000130711	PRDM12	99	77.249	Homo_sapiens
ENSPFOG00000019841	prdm12b	100	88.342	ENSAPOG00000016051	prdm12b	100	88.601	Acanthochromis_polyacanthus
ENSPFOG00000019841	prdm12b	100	66.756	ENSAPOG00000018234	-	100	66.756	Acanthochromis_polyacanthus
ENSPFOG00000019841	prdm12b	91	80.896	ENSAMEG00000016234	PRDM12	99	81.493	Ailuropoda_melanoleuca
ENSPFOG00000019841	prdm12b	100	78.796	ENSACIG00000005193	-	100	78.796	Amphilophus_citrinellus
ENSPFOG00000019841	prdm12b	100	88.127	ENSACIG00000019578	prdm12b	100	89.446	Amphilophus_citrinellus
ENSPFOG00000019841	prdm12b	100	87.696	ENSAOCG00000015040	prdm12b	100	87.958	Amphiprion_ocellaris
ENSPFOG00000019841	prdm12b	100	72.589	ENSAPEG00000022849	-	99	73.096	Amphiprion_percula
ENSPFOG00000019841	prdm12b	100	88.391	ENSAPEG00000015092	prdm12b	100	89.182	Amphiprion_percula
ENSPFOG00000019841	prdm12b	100	77.778	ENSATEG00000014595	-	98	81.686	Anabas_testudineus
ENSPFOG00000019841	prdm12b	94	81.429	ENSANAG00000020616	PRDM12	99	81.429	Aotus_nancymaae
ENSPFOG00000019841	prdm12b	100	75.940	ENSACLG00000007631	-	100	76.131	Astatotilapia_calliptera
ENSPFOG00000019841	prdm12b	100	86.631	ENSACLG00000011876	prdm12b	100	86.631	Astatotilapia_calliptera
ENSPFOG00000019841	prdm12b	100	81.649	ENSAMXG00000033665	prdm12b	100	81.649	Astyanax_mexicanus
ENSPFOG00000019841	prdm12b	100	81.769	ENSAMXG00000008540	PRDM12	100	81.769	Astyanax_mexicanus
ENSPFOG00000019841	prdm12b	93	81.924	ENSBTAG00000023797	PRDM12	99	78.016	Bos_taurus
ENSPFOG00000019841	prdm12b	93	82.216	ENSCJAG00000020540	PRDM12	99	78.437	Callithrix_jacchus
ENSPFOG00000019841	prdm12b	82	82.392	ENSCAFG00000023076	PRDM12	99	77.477	Canis_familiaris
ENSPFOG00000019841	prdm12b	93	82.216	ENSCAFG00020024046	PRDM12	99	77.867	Canis_lupus_dingo
ENSPFOG00000019841	prdm12b	93	82.216	ENSCHIG00000025005	PRDM12	99	78.284	Capra_hircus
ENSPFOG00000019841	prdm12b	88	82.407	ENSCPOG00000005901	PRDM12	95	82.407	Cavia_porcellus
ENSPFOG00000019841	prdm12b	93	82.216	ENSCCAG00000037485	PRDM12	99	77.540	Cebus_capucinus
ENSPFOG00000019841	prdm12b	93	82.216	ENSCATG00000020327	PRDM12	99	77.540	Cercocebus_atys
ENSPFOG00000019841	prdm12b	92	82.059	ENSCLAG00000005499	PRDM12	90	82.059	Chinchilla_lanigera
ENSPFOG00000019841	prdm12b	93	82.216	ENSCSAG00000014756	PRDM12	99	77.600	Chlorocebus_sabaeus
ENSPFOG00000019841	prdm12b	100	80.323	ENSCPBG00000022628	PRDM12	99	80.323	Chrysemys_picta_bellii
ENSPFOG00000019841	prdm12b	93	81.924	ENSCGRG00001015005	Prdm12	99	77.454	Cricetulus_griseus_chok1gshd
ENSPFOG00000019841	prdm12b	100	77.806	ENSCVAG00000000944	-	100	77.806	Cyprinodon_variegatus
ENSPFOG00000019841	prdm12b	100	95.174	ENSCVAG00000017166	prdm12b	100	95.174	Cyprinodon_variegatus
ENSPFOG00000019841	prdm12b	100	82.447	ENSDARG00000007430	prdm12b	100	82.447	Danio_rerio
ENSPFOG00000019841	prdm12b	93	81.871	ENSDNOG00000042302	PRDM12	99	78.167	Dasypus_novemcinctus
ENSPFOG00000019841	prdm12b	86	66.369	ENSEBUG00000016780	prdm12b	74	67.857	Eptatretus_burgeri
ENSPFOG00000019841	prdm12b	94	81.429	ENSEASG00005008472	PRDM12	99	78.284	Equus_asinus_asinus
ENSPFOG00000019841	prdm12b	94	81.197	ENSECAG00000005933	PRDM12	99	78.284	Equus_caballus
ENSPFOG00000019841	prdm12b	100	82.275	ENSELUG00000013674	PRDM12	100	83.862	Esox_lucius
ENSPFOG00000019841	prdm12b	100	81.432	ENSELUG00000009905	prdm12b	100	81.432	Esox_lucius
ENSPFOG00000019841	prdm12b	93	82.216	ENSFCAG00000043086	PRDM12	99	77.807	Felis_catus
ENSPFOG00000019841	prdm12b	100	80.863	ENSFALG00000001445	PRDM12	89	80.533	Ficedula_albicollis
ENSPFOG00000019841	prdm12b	100	94.947	ENSFHEG00000003944	prdm12b	100	94.947	Fundulus_heteroclitus
ENSPFOG00000019841	prdm12b	100	75.126	ENSFHEG00000007746	-	100	75.126	Fundulus_heteroclitus
ENSPFOG00000019841	prdm12b	100	82.850	ENSGMOG00000011797	prdm12b	100	81.984	Gadus_morhua
ENSPFOG00000019841	prdm12b	100	80.863	ENSGALG00000003895	PRDM12	99	80.863	Gallus_gallus
ENSPFOG00000019841	prdm12b	100	94.723	ENSGAFG00000010827	prdm12b	99	94.723	Gambusia_affinis
ENSPFOG00000019841	prdm12b	100	89.037	ENSGACG00000016713	prdm12b	99	89.037	Gasterosteus_aculeatus
ENSPFOG00000019841	prdm12b	100	80.323	ENSGAGG00000014083	PRDM12	99	80.323	Gopherus_agassizii
ENSPFOG00000019841	prdm12b	93	81.924	ENSGGOG00000010568	PRDM12	99	77.188	Gorilla_gorilla
ENSPFOG00000019841	prdm12b	100	75.940	ENSHBUG00000022537	-	93	76.131	Haplochromis_burtoni
ENSPFOG00000019841	prdm12b	100	89.655	ENSHBUG00000022878	prdm12b	100	89.920	Haplochromis_burtoni
ENSPFOG00000019841	prdm12b	92	82.353	ENSHGLG00000013939	PRDM12	99	77.660	Heterocephalus_glaber_female
ENSPFOG00000019841	prdm12b	100	72.251	ENSHCOG00000021167	-	100	72.251	Hippocampus_comes
ENSPFOG00000019841	prdm12b	91	86.377	ENSHCOG00000003663	prdm12b	100	81.612	Hippocampus_comes
ENSPFOG00000019841	prdm12b	100	79.839	ENSIPUG00000019544	PRDM12	100	79.839	Ictalurus_punctatus
ENSPFOG00000019841	prdm12b	100	82.888	ENSIPUG00000017053	prdm12b	100	83.200	Ictalurus_punctatus
ENSPFOG00000019841	prdm12b	93	82.216	ENSSTOG00000005986	PRDM12	87	82.216	Ictidomys_tridecemlineatus
ENSPFOG00000019841	prdm12b	92	82.647	ENSJJAG00000005424	Prdm12	99	82.647	Jaculus_jaculus
ENSPFOG00000019841	prdm12b	94	78.632	ENSKMAG00000021205	-	93	78.632	Kryptolebias_marmoratus
ENSPFOG00000019841	prdm12b	100	81.034	ENSKMAG00000016921	prdm12b	100	82.759	Kryptolebias_marmoratus
ENSPFOG00000019841	prdm12b	100	87.105	ENSLBEG00000017769	prdm12b	100	87.632	Labrus_bergylta
ENSPFOG00000019841	prdm12b	100	78.068	ENSLBEG00000007776	-	100	78.329	Labrus_bergylta
ENSPFOG00000019841	prdm12b	100	81.030	ENSLACG00000017560	PRDM12	99	81.030	Latimeria_chalumnae
ENSPFOG00000019841	prdm12b	100	80.965	ENSLOCG00000005429	prdm12b	99	81.600	Lepisosteus_oculatus
ENSPFOG00000019841	prdm12b	93	81.341	ENSLAFG00000006979	PRDM12	92	80.571	Loxodonta_africana
ENSPFOG00000019841	prdm12b	100	76.455	ENSMFAG00000040322	PRDM12	99	76.984	Macaca_fascicularis
ENSPFOG00000019841	prdm12b	93	82.216	ENSMNEG00000037234	PRDM12	99	77.540	Macaca_nemestrina
ENSPFOG00000019841	prdm12b	100	73.815	ENSMAMG00000018988	-	100	74.250	Mastacembelus_armatus
ENSPFOG00000019841	prdm12b	100	87.798	ENSMAMG00000013212	prdm12b	100	89.390	Mastacembelus_armatus
ENSPFOG00000019841	prdm12b	100	75.561	ENSMZEG00005000415	PRDM12	100	75.750	Maylandia_zebra
ENSPFOG00000019841	prdm12b	96	81.564	ENSMGAG00000005438	PRDM12	98	81.564	Meleagris_gallopavo
ENSPFOG00000019841	prdm12b	100	77.660	ENSMAUG00000013040	Prdm12	99	77.660	Mesocricetus_auratus
ENSPFOG00000019841	prdm12b	95	81.197	ENSMICG00000015480	PRDM12	99	78.016	Microcebus_murinus
ENSPFOG00000019841	prdm12b	100	78.320	ENSMOCG00000021026	Prdm12	92	81.429	Microtus_ochrogaster
ENSPFOG00000019841	prdm12b	100	79.245	ENSMODG00000012108	PRDM12	99	79.245	Monodelphis_domestica
ENSPFOG00000019841	prdm12b	100	73.797	ENSMALG00000021901	prdm12b	99	73.797	Monopterus_albus
ENSPFOG00000019841	prdm12b	93	81.924	MGP_CAROLIEiJ_G0023414	Prdm12	99	77.926	Mus_caroli
ENSPFOG00000019841	prdm12b	93	81.924	ENSMUSG00000079466	Prdm12	99	77.926	Mus_musculus
ENSPFOG00000019841	prdm12b	93	81.924	MGP_PahariEiJ_G0024871	Prdm12	99	77.926	Mus_pahari
ENSPFOG00000019841	prdm12b	93	81.924	MGP_SPRETEiJ_G0024331	Prdm12	99	77.926	Mus_spretus
ENSPFOG00000019841	prdm12b	91	83.036	ENSNGAG00000018480	Prdm12	99	78.591	Nannospalax_galili
ENSPFOG00000019841	prdm12b	100	87.368	ENSNBRG00000006727	prdm12b	100	88.947	Neolamprologus_brichardi
ENSPFOG00000019841	prdm12b	100	73.615	ENSNBRG00000024312	-	100	73.615	Neolamprologus_brichardi
ENSPFOG00000019841	prdm12b	100	70.889	ENSMEUG00000003828	PRDM12	99	70.889	Notamacropus_eugenii
ENSPFOG00000019841	prdm12b	92	82.647	ENSOPRG00000008680	PRDM12	99	82.647	Ochotona_princeps
ENSPFOG00000019841	prdm12b	94	81.143	ENSODEG00000016282	PRDM12	63	81.143	Octodon_degus
ENSPFOG00000019841	prdm12b	63	77.682	ENSOANG00000001043	PRDM12	100	77.682	Ornithorhynchus_anatinus
ENSPFOG00000019841	prdm12b	84	82.637	ENSOCUG00000008241	PRDM12	96	82.637	Oryctolagus_cuniculus
ENSPFOG00000019841	prdm12b	100	87.368	ENSORLG00000007114	prdm12b	99	87.632	Oryzias_latipes
ENSPFOG00000019841	prdm12b	100	76.531	ENSORLG00000017558	-	100	76.786	Oryzias_latipes
ENSPFOG00000019841	prdm12b	100	86.126	ENSORLG00020019565	prdm12b	99	86.649	Oryzias_latipes_hni
ENSPFOG00000019841	prdm12b	100	76.336	ENSORLG00020013167	-	100	76.590	Oryzias_latipes_hni
ENSPFOG00000019841	prdm12b	100	85.789	ENSORLG00015007621	prdm12b	99	87.368	Oryzias_latipes_hsok
ENSPFOG00000019841	prdm12b	100	76.531	ENSORLG00015003435	-	100	76.786	Oryzias_latipes_hsok
ENSPFOG00000019841	prdm12b	100	85.677	ENSOMEG00000004134	prdm12b	99	86.979	Oryzias_melastigma
ENSPFOG00000019841	prdm12b	100	77.749	ENSOMEG00000007762	-	100	78.010	Oryzias_melastigma
ENSPFOG00000019841	prdm12b	93	82.216	ENSOGAG00000007557	PRDM12	99	82.216	Otolemur_garnettii
ENSPFOG00000019841	prdm12b	81	81.208	ENSPPAG00000031506	-	97	81.208	Pan_paniscus
ENSPFOG00000019841	prdm12b	100	72.312	ENSPPRG00000023024	PRDM12	92	72.312	Panthera_pardus
ENSPFOG00000019841	prdm12b	93	82.216	ENSPTRG00000043324	-	99	77.454	Pan_troglodytes
ENSPFOG00000019841	prdm12b	93	82.216	ENSPTRG00000021475	PRDM12	99	77.454	Pan_troglodytes
ENSPFOG00000019841	prdm12b	93	82.216	ENSPANG00000025967	PRDM12	99	77.540	Papio_anubis
ENSPFOG00000019841	prdm12b	100	83.690	ENSPKIG00000007228	prdm12b	100	83.777	Paramormyrops_kingsleyae
ENSPFOG00000019841	prdm12b	91	80.060	ENSPKIG00000004305	PRDM12	94	81.250	Paramormyrops_kingsleyae
ENSPFOG00000019841	prdm12b	100	80.054	ENSPSIG00000006739	PRDM12	99	80.054	Pelodiscus_sinensis
ENSPFOG00000019841	prdm12b	100	85.867	ENSPMGG00000008867	prdm12b	99	87.200	Periophthalmus_magnuspinnatus
ENSPFOG00000019841	prdm12b	100	74.430	ENSPMGG00000002356	-	100	74.430	Periophthalmus_magnuspinnatus
ENSPFOG00000019841	prdm12b	93	81.924	ENSPEMG00000009969	Prdm12	91	81.924	Peromyscus_maniculatus_bairdii
ENSPFOG00000019841	prdm12b	100	79.245	ENSPCIG00000024119	PRDM12	99	79.245	Phascolarctos_cinereus
ENSPFOG00000019841	prdm12b	100	95.026	ENSPLAG00000016626	prdm12b	99	95.026	Poecilia_latipinna
ENSPFOG00000019841	prdm12b	96	94.580	ENSPMEG00000016698	prdm12b	99	94.580	Poecilia_mexicana
ENSPFOG00000019841	prdm12b	100	94.256	ENSPREG00000015073	prdm12b	99	94.256	Poecilia_reticulata
ENSPFOG00000019841	prdm12b	95	75.556	ENSPREG00000003211	-	94	75.556	Poecilia_reticulata
ENSPFOG00000019841	prdm12b	91	83.333	ENSPPYG00000019694	PRDM12	92	83.333	Pongo_abelii
ENSPFOG00000019841	prdm12b	93	82.216	ENSPCOG00000022255	PRDM12	99	77.719	Propithecus_coquereli
ENSPFOG00000019841	prdm12b	93	82.216	ENSPVAG00000001511	PRDM12	99	77.719	Pteropus_vampyrus
ENSPFOG00000019841	prdm12b	100	75.561	ENSPNYG00000013589	-	100	75.750	Pundamilia_nyererei
ENSPFOG00000019841	prdm12b	100	87.863	ENSPNYG00000009607	prdm12b	100	88.654	Pundamilia_nyererei
ENSPFOG00000019841	prdm12b	100	82.353	ENSPNAG00000024532	prdm12b	100	82.888	Pygocentrus_nattereri
ENSPFOG00000019841	prdm12b	100	77.546	ENSPNAG00000013396	PRDM12	100	78.068	Pygocentrus_nattereri
ENSPFOG00000019841	prdm12b	93	81.924	ENSRNOG00000009218	Prdm12	99	77.926	Rattus_norvegicus
ENSPFOG00000019841	prdm12b	89	83.232	ENSRBIG00000042712	PRDM12	99	76.408	Rhinopithecus_bieti
ENSPFOG00000019841	prdm12b	90	83.434	ENSRROG00000043554	PRDM12	99	83.434	Rhinopithecus_roxellana
ENSPFOG00000019841	prdm12b	100	78.706	ENSSHAG00000015972	PRDM12	99	78.706	Sarcophilus_harrisii
ENSPFOG00000019841	prdm12b	100	85.166	ENSSMAG00000003754	prdm12b	100	86.957	Scophthalmus_maximus
ENSPFOG00000019841	prdm12b	100	78.961	ENSSDUG00000019071	-	100	78.961	Seriola_dumerili
ENSPFOG00000019841	prdm12b	100	86.269	ENSSDUG00000023498	prdm12b	100	86.788	Seriola_dumerili
ENSPFOG00000019841	prdm12b	100	78.649	ENSSLDG00000013562	-	100	78.649	Seriola_lalandi_dorsalis
ENSPFOG00000019841	prdm12b	100	87.467	ENSSLDG00000009557	prdm12b	100	88.512	Seriola_lalandi_dorsalis
ENSPFOG00000019841	prdm12b	100	79.515	ENSSPUG00000013424	PRDM12	99	79.515	Sphenodon_punctatus
ENSPFOG00000019841	prdm12b	100	70.312	ENSSPAG00000022420	-	100	70.833	Stegastes_partitus
ENSPFOG00000019841	prdm12b	100	86.945	ENSSPAG00000018824	prdm12b	100	87.728	Stegastes_partitus
ENSPFOG00000019841	prdm12b	93	82.216	ENSSSCG00000005703	PRDM12	99	77.867	Sus_scrofa
ENSPFOG00000019841	prdm12b	100	78.495	ENSTRUG00000013239	-	100	78.495	Takifugu_rubripes
ENSPFOG00000019841	prdm12b	100	86.170	ENSTRUG00000018659	prdm12b	100	86.968	Takifugu_rubripes
ENSPFOG00000019841	prdm12b	100	76.471	ENSTNIG00000005859	-	99	76.471	Tetraodon_nigroviridis
ENSPFOG00000019841	prdm12b	100	85.904	ENSTNIG00000009020	prdm12b	99	86.436	Tetraodon_nigroviridis
ENSPFOG00000019841	prdm12b	93	82.216	ENSUAMG00000009653	PRDM12	92	82.216	Ursus_americanus
ENSPFOG00000019841	prdm12b	93	82.216	ENSVVUG00000027662	PRDM12	79	82.216	Vulpes_vulpes
ENSPFOG00000019841	prdm12b	100	95.225	ENSXCOG00000002836	prdm12b	99	95.225	Xiphophorus_couchianus
ENSPFOG00000019841	prdm12b	100	74.378	ENSXMAG00000028012	-	100	74.378	Xiphophorus_maculatus
ENSPFOG00000019841	prdm12b	100	96.286	ENSXMAG00000005537	prdm12b	100	96.286	Xiphophorus_maculatus