EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000020490 (Gene tree)
Gene ID: 103154968
Gene Symbol: oscp1a
Alias: -
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 354 bases
Position: chrKI520018.1:66748-67101
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000020616	LSM	PF01423.22	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000020640	-	354	-	ENSPFOP00000020616	118 (aa)	-	A0A087YRG3

Gene Model

Click here to download ENSPFOG00000020490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000020490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000020490	oscp1a	59	32.877	ENSPFOG00000001621	si:ch73-14h10.2	77	32.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000020490	oscp1a	95	66.071	ENSG00000181817	LSM10	91	66.071	Homo_sapiens
ENSPFOG00000020490	oscp1a	95	67.857	ENSAMEG00000019854	LSM10	91	67.857	Ailuropoda_melanoleuca
ENSPFOG00000020490	oscp1a	97	72.807	ENSACIG00000015420	oscp1a	75	72.807	Amphilophus_citrinellus
ENSPFOG00000020490	oscp1a	97	78.261	ENSAOCG00000014654	-	95	78.261	Amphiprion_ocellaris
ENSPFOG00000020490	oscp1a	93	76.364	ENSAOCG00000015607	LSM10	85	76.364	Amphiprion_ocellaris
ENSPFOG00000020490	oscp1a	97	78.261	ENSAOCG00000015618	LSM10	95	78.261	Amphiprion_ocellaris
ENSPFOG00000020490	oscp1a	93	76.364	ENSAPEG00000021851	LSM10	85	76.364	Amphiprion_percula
ENSPFOG00000020490	oscp1a	97	78.261	ENSAPEG00000021845	-	95	78.261	Amphiprion_percula
ENSPFOG00000020490	oscp1a	94	74.775	ENSATEG00000006310	oscp1a	82	74.775	Anabas_testudineus
ENSPFOG00000020490	oscp1a	99	59.829	ENSACAG00000001231	LSM10	95	59.829	Anolis_carolinensis
ENSPFOG00000020490	oscp1a	95	64.286	ENSANAG00000031489	-	92	64.286	Aotus_nancymaae
ENSPFOG00000020490	oscp1a	95	66.071	ENSANAG00000018759	-	91	66.071	Aotus_nancymaae
ENSPFOG00000020490	oscp1a	97	70.175	ENSACLG00000004728	oscp1a	93	70.175	Astatotilapia_calliptera
ENSPFOG00000020490	oscp1a	99	70.085	ENSAMXG00000025301	oscp1a	97	70.085	Astyanax_mexicanus
ENSPFOG00000020490	oscp1a	98	63.793	ENSBTAG00000024096	LSM10	95	63.793	Bos_taurus
ENSPFOG00000020490	oscp1a	95	66.964	ENSCJAG00000044880	LSM10	91	66.964	Callithrix_jacchus
ENSPFOG00000020490	oscp1a	95	68.750	ENSCAFG00000003382	LSM10	91	68.750	Canis_familiaris
ENSPFOG00000020490	oscp1a	95	68.750	ENSCAFG00020008920	LSM10	91	68.750	Canis_lupus_dingo
ENSPFOG00000020490	oscp1a	98	63.793	ENSCHIG00000009398	LSM10	95	63.793	Capra_hircus
ENSPFOG00000020490	oscp1a	95	66.964	ENSCAPG00000012567	LSM10	91	66.964	Cavia_aperea
ENSPFOG00000020490	oscp1a	95	66.964	ENSCPOG00000039302	LSM10	91	66.964	Cavia_porcellus
ENSPFOG00000020490	oscp1a	95	66.071	ENSCCAG00000018913	-	91	66.071	Cebus_capucinus
ENSPFOG00000020490	oscp1a	95	63.393	ENSCCAG00000008378	-	91	63.393	Cebus_capucinus
ENSPFOG00000020490	oscp1a	95	66.071	ENSCATG00000006589	LSM10	91	66.071	Cercocebus_atys
ENSPFOG00000020490	oscp1a	95	66.964	ENSCLAG00000008633	LSM10	91	66.964	Chinchilla_lanigera
ENSPFOG00000020490	oscp1a	95	66.071	ENSCSAG00000000134	LSM10	91	66.071	Chlorocebus_sabaeus
ENSPFOG00000020490	oscp1a	95	64.035	ENSCHOG00000008615	LSM10	91	64.035	Choloepus_hoffmanni
ENSPFOG00000020490	oscp1a	86	32.673	ENSCSAVG00000001896	-	86	32.673	Ciona_savignyi
ENSPFOG00000020490	oscp1a	95	66.071	ENSCANG00000019928	LSM10	91	66.071	Colobus_angolensis_palliatus
ENSPFOG00000020490	oscp1a	95	67.857	ENSCGRG00001004317	-	92	67.857	Cricetulus_griseus_chok1gshd
ENSPFOG00000020490	oscp1a	94	61.062	ENSCGRG00001022673	-	91	61.062	Cricetulus_griseus_chok1gshd
ENSPFOG00000020490	oscp1a	95	67.857	ENSCGRG00000014935	-	92	67.857	Cricetulus_griseus_crigri
ENSPFOG00000020490	oscp1a	94	61.062	ENSCGRG00000015514	-	91	61.062	Cricetulus_griseus_crigri
ENSPFOG00000020490	oscp1a	97	74.561	ENSCSEG00000010374	oscp1a	77	74.561	Cynoglossus_semilaevis
ENSPFOG00000020490	oscp1a	98	72.414	ENSCVAG00000001536	oscp1a	88	72.414	Cyprinodon_variegatus
ENSPFOG00000020490	oscp1a	100	67.797	ENSDARG00000101222	oscp1a	98	67.797	Danio_rerio
ENSPFOG00000020490	oscp1a	71	70.238	ENSDARG00000109563	CABZ01074453.1	98	70.238	Danio_rerio
ENSPFOG00000020490	oscp1a	95	67.857	ENSDNOG00000036662	LSM10	91	67.857	Dasypus_novemcinctus
ENSPFOG00000020490	oscp1a	95	66.964	ENSDORG00000007579	Lsm10	91	66.964	Dipodomys_ordii
ENSPFOG00000020490	oscp1a	96	65.487	ENSETEG00000005703	LSM10	92	65.487	Echinops_telfairi
ENSPFOG00000020490	oscp1a	95	53.571	ENSEBUG00000001312	oscp1a	92	53.571	Eptatretus_burgeri
ENSPFOG00000020490	oscp1a	95	67.857	ENSEASG00005012194	LSM10	91	67.857	Equus_asinus_asinus
ENSPFOG00000020490	oscp1a	95	67.857	ENSECAG00000005071	LSM10	91	67.857	Equus_caballus
ENSPFOG00000020490	oscp1a	95	68.750	ENSEEUG00000012032	LSM10	91	68.750	Erinaceus_europaeus
ENSPFOG00000020490	oscp1a	100	72.034	ENSELUG00000007452	oscp1a	97	72.034	Esox_lucius
ENSPFOG00000020490	oscp1a	98	65.517	ENSFALG00000000851	LSM10	94	65.517	Ficedula_albicollis
ENSPFOG00000020490	oscp1a	95	66.964	ENSFDAG00000021056	LSM10	91	66.964	Fukomys_damarensis
ENSPFOG00000020490	oscp1a	93	76.577	ENSFHEG00000001058	oscp1a	96	76.577	Fundulus_heteroclitus
ENSPFOG00000020490	oscp1a	97	65.217	ENSGMOG00000019832	oscp1a	97	65.217	Gadus_morhua
ENSPFOG00000020490	oscp1a	100	66.102	ENSGALG00000002127	LSM10	96	66.102	Gallus_gallus
ENSPFOG00000020490	oscp1a	89	89.524	ENSGAFG00000016445	oscp1a	85	89.524	Gambusia_affinis
ENSPFOG00000020490	oscp1a	97	75.439	ENSGACG00000002329	oscp1a	93	75.439	Gasterosteus_aculeatus
ENSPFOG00000020490	oscp1a	95	66.964	ENSGAGG00000024848	LSM10	91	66.964	Gopherus_agassizii
ENSPFOG00000020490	oscp1a	95	66.071	ENSGGOG00000003556	LSM10	91	66.071	Gorilla_gorilla
ENSPFOG00000020490	oscp1a	97	71.053	ENSHBUG00000001722	oscp1a	93	71.053	Haplochromis_burtoni
ENSPFOG00000020490	oscp1a	95	65.179	ENSHGLG00000011625	LSM10	91	65.179	Heterocephalus_glaber_female
ENSPFOG00000020490	oscp1a	95	65.179	ENSHGLG00100001769	LSM10	91	65.179	Heterocephalus_glaber_male
ENSPFOG00000020490	oscp1a	91	71.028	ENSIPUG00000005808	oscp1a	93	71.028	Ictalurus_punctatus
ENSPFOG00000020490	oscp1a	95	67.857	ENSSTOG00000000606	LSM10	91	67.857	Ictidomys_tridecemlineatus
ENSPFOG00000020490	oscp1a	97	78.070	ENSKMAG00000012143	oscp1a	94	78.070	Kryptolebias_marmoratus
ENSPFOG00000020490	oscp1a	92	71.560	ENSLBEG00000017764	oscp1a	89	71.560	Labrus_bergylta
ENSPFOG00000020490	oscp1a	95	60.714	ENSLACG00000015904	LSM10	86	60.714	Latimeria_chalumnae
ENSPFOG00000020490	oscp1a	97	68.421	ENSLOCG00000018277	oscp1a	93	68.421	Lepisosteus_oculatus
ENSPFOG00000020490	oscp1a	95	66.964	ENSLAFG00000009600	LSM10	91	66.964	Loxodonta_africana
ENSPFOG00000020490	oscp1a	95	66.071	ENSMFAG00000009115	LSM10	91	66.071	Macaca_fascicularis
ENSPFOG00000020490	oscp1a	95	66.071	ENSMMUG00000017338	LSM10	91	66.071	Macaca_mulatta
ENSPFOG00000020490	oscp1a	95	66.071	ENSMNEG00000020023	LSM10	91	66.071	Macaca_nemestrina
ENSPFOG00000020490	oscp1a	95	66.071	ENSMLEG00000025150	LSM10	91	66.071	Mandrillus_leucophaeus
ENSPFOG00000020490	oscp1a	98	72.414	ENSMAMG00000004427	oscp1a	95	72.414	Mastacembelus_armatus
ENSPFOG00000020490	oscp1a	97	70.175	ENSMZEG00005026307	oscp1a	93	70.175	Maylandia_zebra
ENSPFOG00000020490	oscp1a	100	65.254	ENSMGAG00000015707	LSM10	96	65.254	Meleagris_gallopavo
ENSPFOG00000020490	oscp1a	95	68.750	ENSMAUG00000016624	Lsm10	92	68.750	Mesocricetus_auratus
ENSPFOG00000020490	oscp1a	95	68.750	ENSMOCG00000021943	Lsm10	92	68.750	Microtus_ochrogaster
ENSPFOG00000020490	oscp1a	97	75.652	ENSMMOG00000013597	oscp1a	86	75.652	Mola_mola
ENSPFOG00000020490	oscp1a	95	70.536	ENSMODG00000023328	LSM10	91	70.536	Monodelphis_domestica
ENSPFOG00000020490	oscp1a	95	67.857	MGP_CAROLIEiJ_G0026467	Lsm10	95	69.318	Mus_caroli
ENSPFOG00000020490	oscp1a	95	67.857	ENSMUSG00000050188	Lsm10	95	69.318	Mus_musculus
ENSPFOG00000020490	oscp1a	95	67.857	MGP_PahariEiJ_G0028798	Lsm10	95	69.318	Mus_pahari
ENSPFOG00000020490	oscp1a	95	67.857	MGP_SPRETEiJ_G0027446	Lsm10	95	69.318	Mus_spretus
ENSPFOG00000020490	oscp1a	95	68.750	ENSMPUG00000018593	LSM10	91	68.750	Mustela_putorius_furo
ENSPFOG00000020490	oscp1a	95	67.857	ENSMLUG00000023895	LSM10	91	67.857	Myotis_lucifugus
ENSPFOG00000020490	oscp1a	95	66.071	ENSNGAG00000015011	Lsm10	91	66.071	Nannospalax_galili
ENSPFOG00000020490	oscp1a	97	71.930	ENSNBRG00000014306	oscp1a	93	71.930	Neolamprologus_brichardi
ENSPFOG00000020490	oscp1a	95	66.071	ENSNLEG00000033754	LSM10	91	66.071	Nomascus_leucogenys
ENSPFOG00000020490	oscp1a	98	68.103	ENSMEUG00000006313	LSM10	94	68.103	Notamacropus_eugenii
ENSPFOG00000020490	oscp1a	95	67.857	ENSOPRG00000001699	LSM10	91	67.857	Ochotona_princeps
ENSPFOG00000020490	oscp1a	95	66.964	ENSODEG00000019161	LSM10	91	66.964	Octodon_degus
ENSPFOG00000020490	oscp1a	100	69.492	ENSONIG00000020904	oscp1a	97	69.492	Oreochromis_niloticus
ENSPFOG00000020490	oscp1a	96	68.142	ENSOANG00000002066	LSM10	92	68.142	Ornithorhynchus_anatinus
ENSPFOG00000020490	oscp1a	95	66.964	ENSOCUG00000005333	LSM10	91	66.964	Oryctolagus_cuniculus
ENSPFOG00000020490	oscp1a	95	77.679	ENSORLG00000009504	oscp1a	93	77.679	Oryzias_latipes
ENSPFOG00000020490	oscp1a	95	77.679	ENSORLG00020016201	oscp1a	93	77.679	Oryzias_latipes_hni
ENSPFOG00000020490	oscp1a	95	76.786	ENSORLG00015007794	oscp1a	92	76.786	Oryzias_latipes_hsok
ENSPFOG00000020490	oscp1a	95	67.857	ENSOGAG00000002653	LSM10	91	67.857	Otolemur_garnettii
ENSPFOG00000020490	oscp1a	98	63.793	ENSOARG00000009596	LSM10	95	63.793	Ovis_aries
ENSPFOG00000020490	oscp1a	95	66.071	ENSPPAG00000023465	LSM10	91	66.071	Pan_paniscus
ENSPFOG00000020490	oscp1a	95	67.857	ENSPPRG00000014619	LSM10	91	67.857	Panthera_pardus
ENSPFOG00000020490	oscp1a	95	67.857	ENSPTIG00000004613	LSM10	91	67.857	Panthera_tigris_altaica
ENSPFOG00000020490	oscp1a	95	66.071	ENSPTRG00000000539	LSM10	91	66.071	Pan_troglodytes
ENSPFOG00000020490	oscp1a	95	66.071	ENSPANG00000023172	LSM10	91	66.071	Papio_anubis
ENSPFOG00000020490	oscp1a	97	71.930	ENSPKIG00000003728	oscp1a	92	71.930	Paramormyrops_kingsleyae
ENSPFOG00000020490	oscp1a	95	66.071	ENSPSIG00000000590	LSM10	91	66.071	Pelodiscus_sinensis
ENSPFOG00000020490	oscp1a	65	72.727	ENSPMGG00000015718	oscp1a	100	72.727	Periophthalmus_magnuspinnatus
ENSPFOG00000020490	oscp1a	86	66.667	ENSPCIG00000014865	LSM10	75	66.667	Phascolarctos_cinereus
ENSPFOG00000020490	oscp1a	100	100.000	ENSPLAG00000016537	oscp1a	90	100.000	Poecilia_latipinna
ENSPFOG00000020490	oscp1a	93	97.273	ENSPMEG00000000174	oscp1a	96	97.273	Poecilia_mexicana
ENSPFOG00000020490	oscp1a	100	95.763	ENSPREG00000009899	oscp1a	90	95.763	Poecilia_reticulata
ENSPFOG00000020490	oscp1a	95	66.071	ENSPPYG00000001539	LSM10	91	66.071	Pongo_abelii
ENSPFOG00000020490	oscp1a	97	64.912	ENSPCAG00000002520	LSM10	93	64.912	Procavia_capensis
ENSPFOG00000020490	oscp1a	95	66.964	ENSPVAG00000008644	LSM10	91	66.964	Pteropus_vampyrus
ENSPFOG00000020490	oscp1a	97	71.053	ENSPNYG00000003138	oscp1a	93	71.053	Pundamilia_nyererei
ENSPFOG00000020490	oscp1a	97	70.175	ENSPNAG00000028829	oscp1a	94	70.175	Pygocentrus_nattereri
ENSPFOG00000020490	oscp1a	95	66.964	ENSRNOG00000025716	Lsm10	92	66.964	Rattus_norvegicus
ENSPFOG00000020490	oscp1a	95	66.071	ENSRBIG00000001561	LSM10	91	66.071	Rhinopithecus_bieti
ENSPFOG00000020490	oscp1a	95	66.071	ENSRROG00000011414	LSM10	91	66.071	Rhinopithecus_roxellana
ENSPFOG00000020490	oscp1a	95	66.071	ENSSBOG00000036413	-	91	66.071	Saimiri_boliviensis_boliviensis
ENSPFOG00000020490	oscp1a	98	68.103	ENSSHAG00000018056	LSM10	94	68.103	Sarcophilus_harrisii
ENSPFOG00000020490	oscp1a	97	75.439	ENSSFOG00015019954	lsm10	93	75.439	Scleropages_formosus
ENSPFOG00000020490	oscp1a	97	74.561	ENSSMAG00000001297	oscp1a	97	74.561	Scophthalmus_maximus
ENSPFOG00000020490	oscp1a	97	67.544	ENSSDUG00000007090	oscp1a	93	67.544	Seriola_dumerili
ENSPFOG00000020490	oscp1a	97	68.421	ENSSLDG00000000800	oscp1a	94	68.421	Seriola_lalandi_dorsalis
ENSPFOG00000020490	oscp1a	86	68.627	ENSSARG00000004211	LSM10	91	66.667	Sorex_araneus
ENSPFOG00000020490	oscp1a	99	74.359	ENSSPAG00000009229	oscp1a	97	74.359	Stegastes_partitus
ENSPFOG00000020490	oscp1a	95	66.964	ENSSSCG00000038916	LSM10	91	66.964	Sus_scrofa
ENSPFOG00000020490	oscp1a	95	67.857	ENSTGUG00000001600	-	92	67.857	Taeniopygia_guttata
ENSPFOG00000020490	oscp1a	98	66.379	ENSTGUG00000001602	-	95	66.379	Taeniopygia_guttata
ENSPFOG00000020490	oscp1a	100	71.186	ENSTRUG00000010531	oscp1a	95	71.186	Takifugu_rubripes
ENSPFOG00000020490	oscp1a	95	67.857	ENSTBEG00000016674	LSM10	91	67.857	Tupaia_belangeri
ENSPFOG00000020490	oscp1a	95	68.750	ENSUAMG00000020265	LSM10	91	68.750	Ursus_americanus
ENSPFOG00000020490	oscp1a	95	68.750	ENSUMAG00000001438	LSM10	52	68.750	Ursus_maritimus
ENSPFOG00000020490	oscp1a	95	68.750	ENSVVUG00000023209	LSM10	91	68.750	Vulpes_vulpes
ENSPFOG00000020490	oscp1a	100	60.169	ENSXETG00000027631	lsm10	96	60.169	Xenopus_tropicalis
ENSPFOG00000020490	oscp1a	98	93.103	ENSXCOG00000018776	oscp1a	73	93.103	Xiphophorus_couchianus
ENSPFOG00000020490	oscp1a	93	92.727	ENSXMAG00000019963	oscp1a	88	92.727	Xiphophorus_maculatus