EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000020883 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 138 bases
Position: chrKI520150.1:275354-275491
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000021005	LSM	PF01423.22	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000021033	-	138	-	ENSPFOP00000021005	46 (aa)	-	A0A087YSK2

Gene Model

Click here to download ENSPFOG00000020883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000020883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000020883	-	89	46.341	ENSPFOG00000008881	lsm6	51	46.341

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000020883	-	93	97.674	ENSCHIG00000017139	-	63	97.674	Capra_hircus
ENSPFOG00000020883	-	100	93.478	ENSCATG00000003132	-	53	93.478	Cercocebus_atys
ENSPFOG00000020883	-	91	100.000	ENSCPBG00000001948	-	81	100.000	Chrysemys_picta_bellii
ENSPFOG00000020883	-	100	93.478	ENSCANG00000006758	-	53	93.478	Colobus_angolensis_palliatus
ENSPFOG00000020883	-	87	77.500	ENSFCAG00000037511	-	57	77.500	Felis_catus
ENSPFOG00000020883	-	93	88.372	ENSFCAG00000032773	-	68	88.372	Felis_catus
ENSPFOG00000020883	-	93	100.000	ENSGAGG00000014834	-	73	100.000	Gopherus_agassizii
ENSPFOG00000020883	-	91	100.000	ENSHBUG00000008160	-	70	100.000	Haplochromis_burtoni
ENSPFOG00000020883	-	89	97.561	ENSHCOG00000010425	-	63	97.561	Hippocampus_comes
ENSPFOG00000020883	-	100	93.478	ENSMFAG00000035517	-	53	93.478	Macaca_fascicularis
ENSPFOG00000020883	-	100	93.478	ENSMMUG00000009302	-	53	93.478	Macaca_mulatta
ENSPFOG00000020883	-	100	93.478	ENSMNEG00000030762	-	53	93.478	Macaca_nemestrina
ENSPFOG00000020883	-	100	93.478	ENSMLEG00000033558	-	53	93.478	Mandrillus_leucophaeus
ENSPFOG00000020883	-	100	93.478	ENSNLEG00000005835	-	53	93.478	Nomascus_leucogenys
ENSPFOG00000020883	-	93	97.674	ENSOGAG00000014320	-	81	97.674	Otolemur_garnettii
ENSPFOG00000020883	-	100	93.478	ENSPPAG00000003072	-	65	97.674	Pan_paniscus
ENSPFOG00000020883	-	100	69.565	ENSPPRG00000020147	-	73	69.565	Panthera_pardus
ENSPFOG00000020883	-	100	93.478	ENSPTRG00000005317	-	65	97.674	Pan_troglodytes
ENSPFOG00000020883	-	100	91.304	ENSPANG00000014632	-	52	91.304	Papio_anubis
ENSPFOG00000020883	-	100	93.478	ENSPCIG00000017205	-	53	93.478	Phascolarctos_cinereus
ENSPFOG00000020883	-	100	93.478	ENSRBIG00000028811	-	53	93.478	Rhinopithecus_bieti
ENSPFOG00000020883	-	100	93.478	ENSRROG00000031057	-	53	93.478	Rhinopithecus_roxellana
ENSPFOG00000020883	-	100	71.739	ENSVVUG00000003155	-	61	71.739	Vulpes_vulpes