EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000021882 (Gene tree)
Gene ID: 103130623
Gene Symbol: lsg1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 4754 bases
Position: chrKI519620.1:3465346-3470099
Accession: 103130623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000028599	MMR_HSR1	PF01926.23	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000024695	-	2156	-	ENSPFOP00000028599	636 (aa)	XP_007542137	A0A096MB08

Gene Model

Click here to download ENSPFOG00000021882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000021882's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000021882	lsg1	99	66.316	ENSG00000041802	LSG1	89	79.747	Homo_sapiens
ENSPFOG00000021882	lsg1	100	79.812	ENSAPOG00000009694	lsg1	98	80.096	Acanthochromis_polyacanthus
ENSPFOG00000021882	lsg1	99	63.205	ENSAMEG00000009343	LSG1	97	65.062	Ailuropoda_melanoleuca
ENSPFOG00000021882	lsg1	98	80.800	ENSACIG00000012406	lsg1	97	80.707	Amphilophus_citrinellus
ENSPFOG00000021882	lsg1	100	80.282	ENSAOCG00000016066	lsg1	98	81.059	Amphiprion_ocellaris
ENSPFOG00000021882	lsg1	100	79.812	ENSAPEG00000003252	lsg1	98	80.578	Amphiprion_percula
ENSPFOG00000021882	lsg1	98	83.013	ENSATEG00000011794	lsg1	97	82.770	Anabas_testudineus
ENSPFOG00000021882	lsg1	94	61.958	ENSACAG00000004222	LSG1	99	61.270	Anolis_carolinensis
ENSPFOG00000021882	lsg1	99	65.964	ENSANAG00000021153	LSG1	97	66.202	Aotus_nancymaae
ENSPFOG00000021882	lsg1	100	81.720	ENSACLG00000000520	lsg1	98	81.575	Astatotilapia_calliptera
ENSPFOG00000021882	lsg1	99	72.798	ENSAMXG00000008271	lsg1	98	73.101	Astyanax_mexicanus
ENSPFOG00000021882	lsg1	99	66.159	ENSBTAG00000008461	LSG1	97	66.823	Bos_taurus
ENSPFOG00000021882	lsg1	75	46.818	WBGene00016907	C53H9.2	82	52.593	Caenorhabditis_elegans
ENSPFOG00000021882	lsg1	99	65.564	ENSCJAG00000013962	LSG1	97	65.426	Callithrix_jacchus
ENSPFOG00000021882	lsg1	95	66.029	ENSCAFG00000013445	LSG1	99	65.974	Canis_familiaris
ENSPFOG00000021882	lsg1	99	65.204	ENSCAFG00020002216	LSG1	99	65.756	Canis_lupus_dingo
ENSPFOG00000021882	lsg1	99	66.156	ENSCHIG00000015769	LSG1	97	66.456	Capra_hircus
ENSPFOG00000021882	lsg1	99	64.371	ENSTSYG00000001447	LSG1	97	64.670	Carlito_syrichta
ENSPFOG00000021882	lsg1	95	65.517	ENSCAPG00000009856	LSG1	99	65.517	Cavia_aperea
ENSPFOG00000021882	lsg1	99	64.910	ENSCCAG00000035744	LSG1	97	65.224	Cebus_capucinus
ENSPFOG00000021882	lsg1	99	66.617	ENSCATG00000042060	LSG1	97	65.231	Cercocebus_atys
ENSPFOG00000021882	lsg1	99	66.316	ENSCSAG00000008796	LSG1	89	66.462	Chlorocebus_sabaeus
ENSPFOG00000021882	lsg1	100	66.416	ENSCPBG00000015941	LSG1	81	67.028	Chrysemys_picta_bellii
ENSPFOG00000021882	lsg1	75	53.419	ENSCING00000007079	-	92	59.184	Ciona_intestinalis
ENSPFOG00000021882	lsg1	79	53.030	ENSCSAVG00000002514	-	96	53.226	Ciona_savignyi
ENSPFOG00000021882	lsg1	99	65.865	ENSCANG00000030709	LSG1	97	66.047	Colobus_angolensis_palliatus
ENSPFOG00000021882	lsg1	99	66.460	ENSCGRG00001019846	Lsg1	97	66.561	Cricetulus_griseus_chok1gshd
ENSPFOG00000021882	lsg1	99	65.902	ENSCGRG00000014617	Lsg1	97	66.144	Cricetulus_griseus_crigri
ENSPFOG00000021882	lsg1	98	76.636	ENSCSEG00000008522	lsg1	97	76.213	Cynoglossus_semilaevis
ENSPFOG00000021882	lsg1	97	87.419	ENSCVAG00000002484	lsg1	97	87.419	Cyprinodon_variegatus
ENSPFOG00000021882	lsg1	100	74.844	ENSDARG00000015352	lsg1	97	74.318	Danio_rerio
ENSPFOG00000021882	lsg1	99	65.152	ENSDNOG00000006224	LSG1	97	64.596	Dasypus_novemcinctus
ENSPFOG00000021882	lsg1	99	49.610	FBgn0266284	Ns3	95	49.755	Drosophila_melanogaster
ENSPFOG00000021882	lsg1	88	74.667	ENSETEG00000003888	LSG1	87	77.966	Echinops_telfairi
ENSPFOG00000021882	lsg1	88	56.419	ENSEBUG00000003119	lsg1	85	56.250	Eptatretus_burgeri
ENSPFOG00000021882	lsg1	99	65.211	ENSEASG00005000678	LSG1	97	65.438	Equus_asinus_asinus
ENSPFOG00000021882	lsg1	99	65.367	ENSECAG00000017659	LSG1	97	65.284	Equus_caballus
ENSPFOG00000021882	lsg1	86	58.621	ENSEEUG00000015217	LSG1	75	59.126	Erinaceus_europaeus
ENSPFOG00000021882	lsg1	100	72.881	ENSELUG00000023973	lsg1	98	73.302	Esox_lucius
ENSPFOG00000021882	lsg1	99	65.152	ENSFCAG00000024957	LSG1	97	65.319	Felis_catus
ENSPFOG00000021882	lsg1	92	64.032	ENSFALG00000007210	LSG1	94	63.710	Ficedula_albicollis
ENSPFOG00000021882	lsg1	99	64.472	ENSFDAG00000017373	LSG1	97	66.086	Fukomys_damarensis
ENSPFOG00000021882	lsg1	97	88.000	ENSFHEG00000003680	lsg1	97	87.840	Fundulus_heteroclitus
ENSPFOG00000021882	lsg1	98	69.219	ENSGMOG00000015834	lsg1	97	69.391	Gadus_morhua
ENSPFOG00000021882	lsg1	99	61.086	ENSGALG00000007058	LSG1	86	61.431	Gallus_gallus
ENSPFOG00000021882	lsg1	97	93.387	ENSGAFG00000015831	lsg1	97	93.387	Gambusia_affinis
ENSPFOG00000021882	lsg1	98	78.730	ENSGACG00000009323	lsg1	97	78.628	Gasterosteus_aculeatus
ENSPFOG00000021882	lsg1	99	66.263	ENSGGOG00000000520	LSG1	97	66.357	Gorilla_gorilla
ENSPFOG00000021882	lsg1	100	82.737	ENSHBUG00000005659	lsg1	98	82.616	Haplochromis_burtoni
ENSPFOG00000021882	lsg1	99	63.945	ENSHGLG00000017390	LSG1	97	64.818	Heterocephalus_glaber_female
ENSPFOG00000021882	lsg1	99	63.945	ENSHGLG00100018587	LSG1	97	64.818	Heterocephalus_glaber_male
ENSPFOG00000021882	lsg1	97	78.378	ENSHCOG00000016848	lsg1	97	78.378	Hippocampus_comes
ENSPFOG00000021882	lsg1	100	73.354	ENSIPUG00000008631	lsg1	97	73.440	Ictalurus_punctatus
ENSPFOG00000021882	lsg1	75	60.679	ENSSTOG00000010234	LSG1	92	59.725	Ictidomys_tridecemlineatus
ENSPFOG00000021882	lsg1	99	66.096	ENSJJAG00000015513	Lsg1	97	66.508	Jaculus_jaculus
ENSPFOG00000021882	lsg1	98	79.327	ENSKMAG00000009681	lsg1	97	79.227	Kryptolebias_marmoratus
ENSPFOG00000021882	lsg1	98	76.886	ENSLBEG00000024261	lsg1	97	77.778	Labrus_bergylta
ENSPFOG00000021882	lsg1	100	65.172	ENSLACG00000013399	LSG1	98	65.697	Latimeria_chalumnae
ENSPFOG00000021882	lsg1	98	70.671	ENSLOCG00000004918	lsg1	97	72.354	Lepisosteus_oculatus
ENSPFOG00000021882	lsg1	99	66.667	ENSLAFG00000012919	-	97	66.875	Loxodonta_africana
ENSPFOG00000021882	lsg1	99	66.466	ENSMFAG00000039903	LSG1	97	65.231	Macaca_fascicularis
ENSPFOG00000021882	lsg1	99	66.466	ENSMMUG00000010708	LSG1	97	66.615	Macaca_mulatta
ENSPFOG00000021882	lsg1	99	66.466	ENSMNEG00000031538	LSG1	97	65.231	Macaca_nemestrina
ENSPFOG00000021882	lsg1	99	66.316	ENSMLEG00000041184	LSG1	97	66.615	Mandrillus_leucophaeus
ENSPFOG00000021882	lsg1	100	77.847	ENSMAMG00000000470	lsg1	98	78.080	Mastacembelus_armatus
ENSPFOG00000021882	lsg1	100	82.737	ENSMZEG00005017865	lsg1	98	82.616	Maylandia_zebra
ENSPFOG00000021882	lsg1	88	62.479	ENSMGAG00000007050	LSG1	99	61.969	Meleagris_gallopavo
ENSPFOG00000021882	lsg1	91	65.535	ENSMAUG00000016976	Lsg1	90	66.200	Mesocricetus_auratus
ENSPFOG00000021882	lsg1	99	63.731	ENSMICG00000049087	LSG1	97	64.241	Microcebus_murinus
ENSPFOG00000021882	lsg1	99	64.329	ENSMOCG00000022136	Lsg1	97	65.000	Microtus_ochrogaster
ENSPFOG00000021882	lsg1	86	90.000	ENSMMOG00000008884	lsg1	97	75.000	Mola_mola
ENSPFOG00000021882	lsg1	99	56.086	ENSMODG00000019828	LSG1	97	55.781	Monodelphis_domestica
ENSPFOG00000021882	lsg1	99	66.718	MGP_CAROLIEiJ_G0020648	Lsg1	97	67.143	Mus_caroli
ENSPFOG00000021882	lsg1	99	66.052	ENSMUSG00000022538	Lsg1	97	66.825	Mus_musculus
ENSPFOG00000021882	lsg1	98	67.136	MGP_PahariEiJ_G0016352	Lsg1	97	66.877	Mus_pahari
ENSPFOG00000021882	lsg1	99	66.873	MGP_SPRETEiJ_G0021544	Lsg1	97	66.984	Mus_spretus
ENSPFOG00000021882	lsg1	99	65.606	ENSMPUG00000003734	LSG1	97	65.785	Mustela_putorius_furo
ENSPFOG00000021882	lsg1	99	66.208	ENSMLUG00000012548	LSG1	97	65.987	Myotis_lucifugus
ENSPFOG00000021882	lsg1	99	64.885	ENSNGAG00000021872	Lsg1	97	65.566	Nannospalax_galili
ENSPFOG00000021882	lsg1	99	65.663	ENSNLEG00000008293	LSG1	97	65.538	Nomascus_leucogenys
ENSPFOG00000021882	lsg1	69	71.134	ENSMEUG00000009041	-	85	71.134	Notamacropus_eugenii
ENSPFOG00000021882	lsg1	100	82.099	ENSONIG00000002635	lsg1	98	82.278	Oreochromis_niloticus
ENSPFOG00000021882	lsg1	95	66.989	ENSOANG00000012742	LSG1	99	67.150	Ornithorhynchus_anatinus
ENSPFOG00000021882	lsg1	99	64.873	ENSOCUG00000004817	LSG1	97	65.116	Oryctolagus_cuniculus
ENSPFOG00000021882	lsg1	98	79.775	ENSORLG00000007695	lsg1	97	79.133	Oryzias_latipes
ENSPFOG00000021882	lsg1	98	79.266	ENSORLG00020016286	lsg1	97	79.107	Oryzias_latipes_hni
ENSPFOG00000021882	lsg1	98	79.133	ENSORLG00015012025	lsg1	97	78.686	Oryzias_latipes_hsok
ENSPFOG00000021882	lsg1	98	77.564	ENSOMEG00000022379	lsg1	97	76.763	Oryzias_melastigma
ENSPFOG00000021882	lsg1	99	63.650	ENSOGAG00000003475	LSG1	97	64.186	Otolemur_garnettii
ENSPFOG00000021882	lsg1	99	65.152	ENSOARG00000020403	LSG1	97	65.938	Ovis_aries
ENSPFOG00000021882	lsg1	99	66.415	ENSPPAG00000029271	LSG1	97	66.667	Pan_paniscus
ENSPFOG00000021882	lsg1	99	64.414	ENSPPRG00000010281	LSG1	97	64.615	Panthera_pardus
ENSPFOG00000021882	lsg1	99	65.099	ENSPTIG00000010789	LSG1	97	65.319	Panthera_tigris_altaica
ENSPFOG00000021882	lsg1	99	66.263	ENSPTRG00000015760	LSG1	97	66.512	Pan_troglodytes
ENSPFOG00000021882	lsg1	99	66.015	ENSPANG00000018249	LSG1	97	64.769	Papio_anubis
ENSPFOG00000021882	lsg1	99	72.969	ENSPKIG00000002895	lsg1	97	73.836	Paramormyrops_kingsleyae
ENSPFOG00000021882	lsg1	96	61.838	ENSPSIG00000009821	LSG1	99	61.801	Pelodiscus_sinensis
ENSPFOG00000021882	lsg1	95	77.924	ENSPMGG00000000931	lsg1	100	77.759	Periophthalmus_magnuspinnatus
ENSPFOG00000021882	lsg1	99	64.536	ENSPEMG00000012082	-	97	64.587	Peromyscus_maniculatus_bairdii
ENSPFOG00000021882	lsg1	99	61.194	ENSPMAG00000007451	lsg1	98	61.162	Petromyzon_marinus
ENSPFOG00000021882	lsg1	98	63.874	ENSPCIG00000013890	LSG1	80	64.211	Phascolarctos_cinereus
ENSPFOG00000021882	lsg1	100	98.428	ENSPLAG00000019536	lsg1	100	98.428	Poecilia_latipinna
ENSPFOG00000021882	lsg1	100	98.746	ENSPMEG00000017281	lsg1	100	98.746	Poecilia_mexicana
ENSPFOG00000021882	lsg1	97	83.070	ENSPREG00000006048	lsg1	97	83.228	Poecilia_reticulata
ENSPFOG00000021882	lsg1	92	64.918	ENSPPYG00000014425	LSG1	97	64.983	Pongo_abelii
ENSPFOG00000021882	lsg1	89	72.000	ENSPCAG00000005511	LSG1	87	76.271	Procavia_capensis
ENSPFOG00000021882	lsg1	99	64.297	ENSPCOG00000012360	LSG1	97	63.256	Propithecus_coquereli
ENSPFOG00000021882	lsg1	100	81.720	ENSPNYG00000021994	lsg1	98	81.575	Pundamilia_nyererei
ENSPFOG00000021882	lsg1	100	73.023	ENSPNAG00000015533	lsg1	98	72.973	Pygocentrus_nattereri
ENSPFOG00000021882	lsg1	99	64.458	ENSRNOG00000001727	Lsg1	97	65.528	Rattus_norvegicus
ENSPFOG00000021882	lsg1	99	65.611	ENSRBIG00000029053	LSG1	97	66.102	Rhinopithecus_bieti
ENSPFOG00000021882	lsg1	99	65.611	ENSRROG00000037702	LSG1	97	66.102	Rhinopithecus_roxellana
ENSPFOG00000021882	lsg1	82	41.111	YGL099W	LSG1	70	41.929	Saccharomyces_cerevisiae
ENSPFOG00000021882	lsg1	99	65.512	ENSSBOG00000034938	LSG1	97	66.047	Saimiri_boliviensis_boliviensis
ENSPFOG00000021882	lsg1	77	61.977	ENSSHAG00000003487	LSG1	100	61.877	Sarcophilus_harrisii
ENSPFOG00000021882	lsg1	98	72.425	ENSSFOG00015008955	lsg1	97	73.151	Scleropages_formosus
ENSPFOG00000021882	lsg1	98	81.804	ENSSDUG00000004622	lsg1	98	81.876	Seriola_dumerili
ENSPFOG00000021882	lsg1	98	80.671	ENSSLDG00000010869	lsg1	97	80.738	Seriola_lalandi_dorsalis
ENSPFOG00000021882	lsg1	82	66.471	ENSSARG00000012981	LSG1	81	64.167	Sorex_araneus
ENSPFOG00000021882	lsg1	100	65.653	ENSSPUG00000016347	LSG1	97	65.367	Sphenodon_punctatus
ENSPFOG00000021882	lsg1	100	77.188	ENSSPAG00000005508	lsg1	98	78.652	Stegastes_partitus
ENSPFOG00000021882	lsg1	99	65.077	ENSSSCG00000011827	LSG1	97	65.142	Sus_scrofa
ENSPFOG00000021882	lsg1	89	61.913	ENSTGUG00000009068	LSG1	100	61.913	Taeniopygia_guttata
ENSPFOG00000021882	lsg1	97	74.116	ENSTRUG00000017380	lsg1	97	74.116	Takifugu_rubripes
ENSPFOG00000021882	lsg1	97	78.331	ENSTNIG00000015570	lsg1	97	78.491	Tetraodon_nigroviridis
ENSPFOG00000021882	lsg1	99	61.339	ENSTTRG00000000559	LSG1	97	61.250	Tursiops_truncatus
ENSPFOG00000021882	lsg1	99	64.318	ENSUAMG00000012454	LSG1	97	65.630	Ursus_americanus
ENSPFOG00000021882	lsg1	99	64.318	ENSUMAG00000000855	LSG1	97	65.630	Ursus_maritimus
ENSPFOG00000021882	lsg1	95	62.460	ENSVPAG00000012400	LSG1	99	62.141	Vicugna_pacos
ENSPFOG00000021882	lsg1	95	65.440	ENSVVUG00000008956	LSG1	97	65.224	Vulpes_vulpes
ENSPFOG00000021882	lsg1	100	66.206	ENSXETG00000003451	lsg1	98	66.343	Xenopus_tropicalis
ENSPFOG00000021882	lsg1	97	93.881	ENSXCOG00000003239	lsg1	97	94.364	Xiphophorus_couchianus
ENSPFOG00000021882	lsg1	97	93.858	ENSXMAG00000005536	lsg1	98	93.858	Xiphophorus_maculatus