EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000022825 (Gene tree)
Gene ID: 103153320
Gene Symbol: alyref
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 4774 bases
Position: chrKI519956.1:375816-380589
Accession: ZDB-GENE-070928-29
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000028952	RRM_1	PF00076.22	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000021842	-	2174	-	ENSPFOP00000028952	274 (aa)	-	A0A096MC11

Gene Model

Click here to download ENSPFOG00000022825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000022825's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000022825	alyref	99	48.175	ENSPFOG00000017094	-	100	45.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000022825	alyref	99	53.430	ENSAPOG00000000183	-	100	52.347	Acanthochromis_polyacanthus
ENSPFOG00000022825	alyref	98	76.277	ENSACIG00000006351	alyref	98	76.449	Amphilophus_citrinellus
ENSPFOG00000022825	alyref	99	48.000	ENSACIG00000020351	-	100	51.203	Amphilophus_citrinellus
ENSPFOG00000022825	alyref	99	53.818	ENSAOCG00000019305	-	100	52.364	Amphiprion_ocellaris
ENSPFOG00000022825	alyref	99	79.061	ENSAOCG00000014012	alyref	100	79.783	Amphiprion_ocellaris
ENSPFOG00000022825	alyref	99	79.061	ENSAPEG00000014603	alyref	100	79.783	Amphiprion_percula
ENSPFOG00000022825	alyref	99	54.545	ENSAPEG00000013527	-	100	52.000	Amphiprion_percula
ENSPFOG00000022825	alyref	99	57.971	ENSATEG00000000382	-	100	58.333	Anabas_testudineus
ENSPFOG00000022825	alyref	99	76.157	ENSATEG00000004307	alyref	100	79.004	Anabas_testudineus
ENSPFOG00000022825	alyref	99	80.935	ENSACLG00000008432	alyref	100	81.295	Astatotilapia_calliptera
ENSPFOG00000022825	alyref	99	53.873	ENSACLG00000010184	-	100	54.196	Astatotilapia_calliptera
ENSPFOG00000022825	alyref	99	72.143	ENSAMXG00000007359	alyref	100	74.286	Astyanax_mexicanus
ENSPFOG00000022825	alyref	98	45.161	ENSCING00000013568	-	99	43.972	Ciona_intestinalis
ENSPFOG00000022825	alyref	98	45.725	ENSCSAVG00000003324	-	99	42.279	Ciona_savignyi
ENSPFOG00000022825	alyref	99	77.338	ENSCSEG00000017800	alyref	100	79.496	Cynoglossus_semilaevis
ENSPFOG00000022825	alyref	99	81.022	ENSCVAG00000014869	alyref	100	84.307	Cyprinodon_variegatus
ENSPFOG00000022825	alyref	99	49.270	ENSCVAG00000007789	-	100	45.126	Cyprinodon_variegatus
ENSPFOG00000022825	alyref	99	77.857	ENSDARG00000077732	alyref	100	77.857	Danio_rerio
ENSPFOG00000022825	alyref	96	43.617	FBgn0010774	Ref1	65	49.444	Drosophila_melanogaster
ENSPFOG00000022825	alyref	69	46.907	ENSEBUG00000006305	alyref	100	39.502	Eptatretus_burgeri
ENSPFOG00000022825	alyref	98	51.493	ENSEBUG00000008253	alyref	95	50.916	Eptatretus_burgeri
ENSPFOG00000022825	alyref	99	72.993	ENSELUG00000017178	alyref	100	70.182	Esox_lucius
ENSPFOG00000022825	alyref	99	64.437	ENSELUG00000008849	-	100	65.493	Esox_lucius
ENSPFOG00000022825	alyref	56	75.949	ENSFALG00000011923	-	96	72.727	Ficedula_albicollis
ENSPFOG00000022825	alyref	99	49.270	ENSFHEG00000004698	-	100	47.273	Fundulus_heteroclitus
ENSPFOG00000022825	alyref	99	81.919	ENSFHEG00000019426	alyref	100	81.685	Fundulus_heteroclitus
ENSPFOG00000022825	alyref	99	70.182	ENSGMOG00000009882	alyref	100	66.909	Gadus_morhua
ENSPFOG00000022825	alyref	66	56.716	ENSGMOG00000013122	-	100	58.763	Gadus_morhua
ENSPFOG00000022825	alyref	99	46.953	ENSGAFG00000007573	-	100	46.377	Gambusia_affinis
ENSPFOG00000022825	alyref	99	98.155	ENSGAFG00000006014	alyref	100	98.155	Gambusia_affinis
ENSPFOG00000022825	alyref	99	80.935	ENSHBUG00000020196	alyref	100	81.295	Haplochromis_burtoni
ENSPFOG00000022825	alyref	99	54.355	ENSHBUG00000001454	-	100	54.514	Haplochromis_burtoni
ENSPFOG00000022825	alyref	97	49.270	ENSHCOG00000012825	-	94	47.445	Hippocampus_comes
ENSPFOG00000022825	alyref	99	72.924	ENSIPUG00000009469	alyref	100	71.119	Ictalurus_punctatus
ENSPFOG00000022825	alyref	72	65.482	ENSSTOG00000016570	-	92	62.567	Ictidomys_tridecemlineatus
ENSPFOG00000022825	alyref	99	53.455	ENSKMAG00000006462	-	100	51.273	Kryptolebias_marmoratus
ENSPFOG00000022825	alyref	99	77.978	ENSKMAG00000008912	alyref	100	79.061	Kryptolebias_marmoratus
ENSPFOG00000022825	alyref	99	48.123	ENSLBEG00000005387	-	100	47.797	Labrus_bergylta
ENSPFOG00000022825	alyref	99	82.545	ENSLBEG00000023118	alyref	90	84.364	Labrus_bergylta
ENSPFOG00000022825	alyref	98	47.653	ENSLBEG00000012930	-	99	45.714	Labrus_bergylta
ENSPFOG00000022825	alyref	75	68.519	ENSLOCG00000013879	alyref	89	67.442	Lepisosteus_oculatus
ENSPFOG00000022825	alyref	99	79.496	ENSMAMG00000003034	alyref	100	80.216	Mastacembelus_armatus
ENSPFOG00000022825	alyref	99	50.347	ENSMAMG00000005464	-	100	49.648	Mastacembelus_armatus
ENSPFOG00000022825	alyref	99	80.935	ENSMZEG00005008639	alyref	100	81.295	Maylandia_zebra
ENSPFOG00000022825	alyref	99	53.521	ENSMZEG00005012096	-	100	53.846	Maylandia_zebra
ENSPFOG00000022825	alyref	98	79.705	ENSMMOG00000012458	alyref	97	77.372	Mola_mola
ENSPFOG00000022825	alyref	98	49.270	ENSMMOG00000007032	-	98	44.366	Mola_mola
ENSPFOG00000022825	alyref	99	50.676	ENSMALG00000006054	-	100	48.797	Monopterus_albus
ENSPFOG00000022825	alyref	99	55.124	ENSMLUG00000006521	-	100	53.214	Myotis_lucifugus
ENSPFOG00000022825	alyref	99	55.000	ENSMLUG00000004098	-	100	53.214	Myotis_lucifugus
ENSPFOG00000022825	alyref	97	54.513	ENSMLUG00000028605	-	98	54.152	Myotis_lucifugus
ENSPFOG00000022825	alyref	97	55.357	ENSMLUG00000022467	-	98	49.462	Myotis_lucifugus
ENSPFOG00000022825	alyref	99	56.475	ENSMLUG00000014372	-	100	54.286	Myotis_lucifugus
ENSPFOG00000022825	alyref	97	56.727	ENSMLUG00000030671	-	99	54.380	Myotis_lucifugus
ENSPFOG00000022825	alyref	97	53.047	ENSMLUG00000009247	-	77	56.872	Myotis_lucifugus
ENSPFOG00000022825	alyref	97	55.926	ENSMLUG00000022178	-	98	54.444	Myotis_lucifugus
ENSPFOG00000022825	alyref	99	66.544	ENSNGAG00000022014	-	100	62.132	Nannospalax_galili
ENSPFOG00000022825	alyref	99	81.295	ENSNBRG00000001747	alyref	100	81.655	Neolamprologus_brichardi
ENSPFOG00000022825	alyref	99	54.610	ENSNBRG00000017460	-	100	54.930	Neolamprologus_brichardi
ENSPFOG00000022825	alyref	99	78.292	ENSONIG00000019434	alyref	100	80.071	Oreochromis_niloticus
ENSPFOG00000022825	alyref	99	55.714	ENSONIG00000003296	-	100	58.007	Oreochromis_niloticus
ENSPFOG00000022825	alyref	98	41.066	ENSORLG00000001620	-	60	46.256	Oryzias_latipes
ENSPFOG00000022825	alyref	99	48.014	ENSORLG00020015673	-	99	47.122	Oryzias_latipes_hni
ENSPFOG00000022825	alyref	99	84.615	ENSORLG00020011942	alyref	100	84.249	Oryzias_latipes_hni
ENSPFOG00000022825	alyref	99	47.331	ENSORLG00015015143	-	99	45.051	Oryzias_latipes_hsok
ENSPFOG00000022825	alyref	99	83.516	ENSORLG00015022664	alyref	100	83.150	Oryzias_latipes_hsok
ENSPFOG00000022825	alyref	99	82.721	ENSOMEG00000019176	alyref	100	83.824	Oryzias_melastigma
ENSPFOG00000022825	alyref	98	51.111	ENSOMEG00000007158	-	97	48.339	Oryzias_melastigma
ENSPFOG00000022825	alyref	67	72.432	ENSPPAG00000036403	-	68	70.811	Pan_paniscus
ENSPFOG00000022825	alyref	99	72.263	ENSPKIG00000006233	-	81	68.116	Paramormyrops_kingsleyae
ENSPFOG00000022825	alyref	99	72.364	ENSPKIG00000007070	alyref	100	69.818	Paramormyrops_kingsleyae
ENSPFOG00000022825	alyref	73	48.000	ENSPMGG00000012994	-	70	58.065	Periophthalmus_magnuspinnatus
ENSPFOG00000022825	alyref	98	76.103	ENSPMGG00000016600	alyref	91	77.455	Periophthalmus_magnuspinnatus
ENSPFOG00000022825	alyref	99	61.871	ENSPEMG00000016628	-	77	75.401	Peromyscus_maniculatus_bairdii
ENSPFOG00000022825	alyref	99	48.175	ENSPLAG00000014380	-	100	45.818	Poecilia_latipinna
ENSPFOG00000022825	alyref	99	99.631	ENSPLAG00000006948	alyref	100	99.631	Poecilia_latipinna
ENSPFOG00000022825	alyref	99	100.000	ENSPMEG00000003547	alyref	100	100.000	Poecilia_mexicana
ENSPFOG00000022825	alyref	99	48.175	ENSPMEG00000023039	-	100	45.818	Poecilia_mexicana
ENSPFOG00000022825	alyref	99	49.265	ENSPREG00000003649	-	100	47.253	Poecilia_reticulata
ENSPFOG00000022825	alyref	99	98.524	ENSPREG00000015795	alyref	100	98.524	Poecilia_reticulata
ENSPFOG00000022825	alyref	98	49.650	ENSPNYG00000002879	-	98	51.786	Pundamilia_nyererei
ENSPFOG00000022825	alyref	99	80.935	ENSPNYG00000017498	alyref	100	81.295	Pundamilia_nyererei
ENSPFOG00000022825	alyref	99	74.820	ENSPNAG00000002531	alyref	100	72.662	Pygocentrus_nattereri
ENSPFOG00000022825	alyref	70	70.769	ENSSBOG00000030924	-	87	69.231	Saimiri_boliviensis_boliviensis
ENSPFOG00000022825	alyref	98	53.818	ENSSHAG00000012866	-	78	58.252	Sarcophilus_harrisii
ENSPFOG00000022825	alyref	98	55.072	ENSSHAG00000000609	-	99	52.768	Sarcophilus_harrisii
ENSPFOG00000022825	alyref	75	76.442	ENSSFOG00015003923	alyref	73	75.120	Scleropages_formosus
ENSPFOG00000022825	alyref	67	73.404	ENSSFOG00015003678	alyref	83	72.432	Scleropages_formosus
ENSPFOG00000022825	alyref	99	80.072	ENSSMAG00000009283	alyref	100	79.348	Scophthalmus_maximus
ENSPFOG00000022825	alyref	99	52.982	ENSSMAG00000011169	-	100	54.902	Scophthalmus_maximus
ENSPFOG00000022825	alyref	99	79.061	ENSSDUG00000016158	alyref	100	79.422	Seriola_dumerili
ENSPFOG00000022825	alyref	99	78.058	ENSSLDG00000017803	alyref	100	78.417	Seriola_lalandi_dorsalis
ENSPFOG00000022825	alyref	99	54.909	ENSSPAG00000017028	-	96	53.818	Stegastes_partitus
ENSPFOG00000022825	alyref	99	51.042	ENSTRUG00000003051	-	100	49.826	Takifugu_rubripes
ENSPFOG00000022825	alyref	99	72.760	ENSTNIG00000011595	alyref	100	71.326	Tetraodon_nigroviridis
ENSPFOG00000022825	alyref	99	50.000	ENSTNIG00000014136	-	100	47.445	Tetraodon_nigroviridis
ENSPFOG00000022825	alyref	68	73.016	ENSVVUG00000000272	-	82	71.809	Vulpes_vulpes
ENSPFOG00000022825	alyref	99	95.941	ENSXCOG00000018047	alyref	99	95.941	Xiphophorus_couchianus
ENSPFOG00000022825	alyref	99	96.310	ENSXMAG00000012218	alyref	99	96.310	Xiphophorus_maculatus
ENSPFOG00000022825	alyref	99	49.635	ENSXMAG00000018086	-	100	46.909	Xiphophorus_maculatus