EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000022837 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 27582 bases
Position: chrKI520227.1:29936-57517
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000027111	La	PF05383.17	5.8e-22	1	1
ENSPFOP00000030290	La	PF05383.17	5.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000027269	-	2597	-	ENSPFOP00000030290	691 (aa)	-	A0A096MFU9
ENSPFOT00000031251	-	2591	-	ENSPFOP00000027111	689 (aa)	-	A0A096M6S0

Gene Model

Click here to download ENSPFOG00000022837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000022837's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000022837	-	87	43.987	ENSPFOG00000005836	larp1	64	40.664
ENSPFOG00000022837	-	99	96.197	ENSPFOG00000019519	larp1b	64	96.197

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000022837	-	86	49.172	ENSG00000138709	LARP1B	98	51.193	Homo_sapiens
ENSPFOG00000022837	-	99	77.033	ENSAPOG00000020101	larp1b	63	77.033	Acanthochromis_polyacanthus
ENSPFOG00000022837	-	77	53.645	ENSAMEG00000002748	LARP1B	97	51.831	Ailuropoda_melanoleuca
ENSPFOG00000022837	-	91	78.446	ENSACIG00000023890	larp1b	61	78.446	Amphilophus_citrinellus
ENSPFOG00000022837	-	99	67.723	ENSAOCG00000014268	larp1b	67	67.677	Amphiprion_ocellaris
ENSPFOG00000022837	-	99	77.522	ENSAPEG00000004126	larp1b	62	77.810	Amphiprion_percula
ENSPFOG00000022837	-	99	76.623	ENSATEG00000017849	larp1b	63	75.606	Anabas_testudineus
ENSPFOG00000022837	-	79	48.014	ENSAPLG00000010129	LARP1B	59	47.487	Anas_platyrhynchos
ENSPFOG00000022837	-	87	49.353	ENSACAG00000011338	LARP1B	66	46.746	Anolis_carolinensis
ENSPFOG00000022837	-	65	54.803	ENSANAG00000034618	LARP1B	81	56.727	Aotus_nancymaae
ENSPFOG00000022837	-	99	77.954	ENSACLG00000011948	larp1b	63	77.810	Astatotilapia_calliptera
ENSPFOG00000022837	-	77	61.425	ENSAMXG00000006805	larp1b	56	52.221	Astyanax_mexicanus
ENSPFOG00000022837	-	85	49.585	ENSBTAG00000012135	LARP1B	95	53.084	Bos_taurus
ENSPFOG00000022837	-	78	50.366	ENSCJAG00000003338	LARP1B	97	51.301	Callithrix_jacchus
ENSPFOG00000022837	-	78	52.564	ENSCAFG00000003831	LARP1B	56	52.190	Canis_familiaris
ENSPFOG00000022837	-	78	52.564	ENSCAFG00020018899	LARP1B	97	50.986	Canis_lupus_dingo
ENSPFOG00000022837	-	78	51.287	ENSCHIG00000023144	LARP1B	99	50.413	Capra_hircus
ENSPFOG00000022837	-	51	50.281	ENSTSYG00000002037	-	92	50.562	Carlito_syrichta
ENSPFOG00000022837	-	78	50.826	ENSCCAG00000021948	LARP1B	98	51.009	Cebus_capucinus
ENSPFOG00000022837	-	78	49.725	ENSCATG00000013541	LARP1B	98	49.908	Cercocebus_atys
ENSPFOG00000022837	-	50	49.425	ENSCLAG00000006448	-	96	50.287	Chinchilla_lanigera
ENSPFOG00000022837	-	78	50.916	ENSCSAG00000003582	LARP1B	56	51.465	Chlorocebus_sabaeus
ENSPFOG00000022837	-	87	49.919	ENSCPBG00000017480	LARP1B	55	49.593	Chrysemys_picta_bellii
ENSPFOG00000022837	-	78	48.529	ENSCANG00000026958	LARP1B	98	46.555	Colobus_angolensis_palliatus
ENSPFOG00000022837	-	52	51.499	ENSCGRG00001004660	-	99	51.771	Cricetulus_griseus_chok1gshd
ENSPFOG00000022837	-	52	51.499	ENSCGRG00000001914	-	99	51.771	Cricetulus_griseus_crigri
ENSPFOG00000022837	-	99	68.547	ENSCSEG00000013519	larp1b	63	68.688	Cynoglossus_semilaevis
ENSPFOG00000022837	-	99	85.094	ENSCVAG00000005046	larp1b	63	84.949	Cyprinodon_variegatus
ENSPFOG00000022837	-	99	52.162	ENSDARG00000061169	larp1b	59	52.999	Danio_rerio
ENSPFOG00000022837	-	76	52.230	ENSDNOG00000018765	-	98	52.416	Dasypus_novemcinctus
ENSPFOG00000022837	-	87	36.295	ENSEBUG00000003668	larp1b	60	36.145	Eptatretus_burgeri
ENSPFOG00000022837	-	78	52.206	ENSEASG00005018106	LARP1B	96	52.408	Equus_asinus_asinus
ENSPFOG00000022837	-	85	50.333	ENSECAG00000001088	LARP1B	51	49.589	Equus_caballus
ENSPFOG00000022837	-	74	61.290	ENSELUG00000023774	larp1b	56	65.000	Esox_lucius
ENSPFOG00000022837	-	77	53.271	ENSFCAG00000014650	-	97	53.084	Felis_catus
ENSPFOG00000022837	-	76	50.280	ENSFALG00000008098	LARP1B	54	48.037	Ficedula_albicollis
ENSPFOG00000022837	-	99	87.265	ENSFHEG00000010264	larp1b	62	86.975	Fundulus_heteroclitus
ENSPFOG00000022837	-	89	67.619	ENSGMOG00000005207	larp1b	55	67.089	Gadus_morhua
ENSPFOG00000022837	-	85	49.079	ENSGALG00000010207	LARP1B	55	47.712	Gallus_gallus
ENSPFOG00000022837	-	75	90.751	ENSGAFG00000012012	larp1b	54	95.560	Gambusia_affinis
ENSPFOG00000022837	-	99	64.698	ENSGACG00000004609	larp1b	62	65.223	Gasterosteus_aculeatus
ENSPFOG00000022837	-	87	49.755	ENSGAGG00000017209	LARP1B	55	49.592	Gopherus_agassizii
ENSPFOG00000022837	-	78	50.640	ENSGGOG00000015900	LARP1B	98	51.193	Gorilla_gorilla
ENSPFOG00000022837	-	99	78.324	ENSHBUG00000009730	larp1b	63	78.179	Haplochromis_burtoni
ENSPFOG00000022837	-	50	50.282	ENSHGLG00000006728	-	96	50.562	Heterocephalus_glaber_female
ENSPFOG00000022837	-	51	42.045	ENSHGLG00000013922	-	95	42.614	Heterocephalus_glaber_female
ENSPFOG00000022837	-	51	42.045	ENSHGLG00100016491	-	95	42.614	Heterocephalus_glaber_male
ENSPFOG00000022837	-	50	51.437	ENSHGLG00100014041	-	95	48.355	Heterocephalus_glaber_male
ENSPFOG00000022837	-	90	60.688	ENSIPUG00000012138	larp1b	60	60.934	Ictalurus_punctatus
ENSPFOG00000022837	-	50	46.552	ENSSTOG00000021917	-	91	42.898	Ictidomys_tridecemlineatus
ENSPFOG00000022837	-	51	48.739	ENSSTOG00000008596	-	97	49.300	Ictidomys_tridecemlineatus
ENSPFOG00000022837	-	52	49.030	ENSJJAG00000022360	Larp1b	99	49.307	Jaculus_jaculus
ENSPFOG00000022837	-	94	79.028	ENSKMAG00000011589	larp1b	61	75.703	Kryptolebias_marmoratus
ENSPFOG00000022837	-	99	75.072	ENSLBEG00000005655	larp1b	63	74.928	Labrus_bergylta
ENSPFOG00000022837	-	95	49.626	ENSLACG00000015247	LARP1B	99	46.793	Latimeria_chalumnae
ENSPFOG00000022837	-	83	48.922	ENSLOCG00000010684	larp1b	58	51.907	Lepisosteus_oculatus
ENSPFOG00000022837	-	52	51.226	ENSLAFG00000008473	-	99	51.771	Loxodonta_africana
ENSPFOG00000022837	-	78	51.193	ENSMFAG00000002218	LARP1B	98	51.560	Macaca_fascicularis
ENSPFOG00000022837	-	78	51.376	ENSMMUG00000021347	LARP1B	98	51.560	Macaca_mulatta
ENSPFOG00000022837	-	78	48.897	ENSMLEG00000009306	LARP1B	55	46.667	Mandrillus_leucophaeus
ENSPFOG00000022837	-	99	76.445	ENSMAMG00000000081	larp1b	63	76.301	Mastacembelus_armatus
ENSPFOG00000022837	-	67	78.224	ENSMZEG00005002545	larp1b	94	78.678	Maylandia_zebra
ENSPFOG00000022837	-	81	40.609	ENSMGAG00000004809	LARP1B	63	41.117	Meleagris_gallopavo
ENSPFOG00000022837	-	52	50.954	ENSMAUG00000007879	-	99	51.226	Mesocricetus_auratus
ENSPFOG00000022837	-	50	45.977	ENSMICG00000037883	-	88	46.552	Microcebus_murinus
ENSPFOG00000022837	-	78	52.661	ENSMICG00000036111	LARP1B	98	52.844	Microcebus_murinus
ENSPFOG00000022837	-	76	40.530	ENSMICG00000028052	-	97	39.015	Microcebus_murinus
ENSPFOG00000022837	-	86	49.447	ENSMODG00000012300	LARP1B	54	48.518	Monodelphis_domestica
ENSPFOG00000022837	-	99	75.902	ENSMALG00000003638	larp1b	61	81.633	Monopterus_albus
ENSPFOG00000022837	-	52	50.954	MGP_CAROLIEiJ_G0024962	Larp1b	99	51.226	Mus_caroli
ENSPFOG00000022837	-	58	48.916	ENSMUSG00000025762	Larp1b	99	51.499	Mus_musculus
ENSPFOG00000022837	-	52	51.366	MGP_PahariEiJ_G0026403	Larp1b	99	51.639	Mus_pahari
ENSPFOG00000022837	-	52	51.226	MGP_SPRETEiJ_G0025897	Larp1b	99	51.499	Mus_spretus
ENSPFOG00000022837	-	81	53.097	ENSMPUG00000017365	LARP1B	53	50.485	Mustela_putorius_furo
ENSPFOG00000022837	-	81	50.171	ENSMLUG00000010229	LARP1B	61	48.547	Myotis_lucifugus
ENSPFOG00000022837	-	79	81.039	ENSNBRG00000023846	larp1b	60	81.039	Neolamprologus_brichardi
ENSPFOG00000022837	-	78	50.640	ENSNLEG00000013819	LARP1B	96	51.873	Nomascus_leucogenys
ENSPFOG00000022837	-	50	50.000	ENSODEG00000001292	-	96	50.427	Octodon_degus
ENSPFOG00000022837	-	86	76.661	ENSONIG00000012386	larp1b	62	76.013	Oreochromis_niloticus
ENSPFOG00000022837	-	78	50.642	ENSOCUG00000013330	LARP1B	55	51.009	Oryctolagus_cuniculus
ENSPFOG00000022837	-	99	70.461	ENSORLG00000017954	larp1b	63	70.317	Oryzias_latipes
ENSPFOG00000022837	-	99	71.223	ENSORLG00020013081	larp1b	63	71.079	Oryzias_latipes_hni
ENSPFOG00000022837	-	99	71.182	ENSORLG00015009580	larp1b	63	70.749	Oryzias_latipes_hsok
ENSPFOG00000022837	-	99	74.566	ENSOMEG00000004210	larp1b	63	74.422	Oryzias_melastigma
ENSPFOG00000022837	-	81	51.056	ENSOGAG00000005771	LARP1B	61	50.880	Otolemur_garnettii
ENSPFOG00000022837	-	78	51.471	ENSOARG00000015300	LARP1B	56	51.471	Ovis_aries
ENSPFOG00000022837	-	78	50.549	ENSPPAG00000030439	LARP1B	98	51.009	Pan_paniscus
ENSPFOG00000022837	-	77	53.271	ENSPPRG00000002743	-	97	52.897	Panthera_pardus
ENSPFOG00000022837	-	77	53.084	ENSPTIG00000011225	LARP1B	97	52.710	Panthera_tigris_altaica
ENSPFOG00000022837	-	78	50.733	ENSPTRG00000016437	LARP1B	98	51.193	Pan_troglodytes
ENSPFOG00000022837	-	78	51.193	ENSPANG00000012488	LARP1B	98	51.560	Papio_anubis
ENSPFOG00000022837	-	71	58.430	ENSPKIG00000014360	larp1b	59	44.728	Paramormyrops_kingsleyae
ENSPFOG00000022837	-	86	51.316	ENSPSIG00000012885	LARP1B	62	50.493	Pelodiscus_sinensis
ENSPFOG00000022837	-	66	76.000	ENSPCIG00000026516	LARP1B	87	53.203	Phascolarctos_cinereus
ENSPFOG00000022837	-	99	99.124	ENSPLAG00000007115	larp1b	63	99.124	Poecilia_latipinna
ENSPFOG00000022837	-	99	98.834	ENSPMEG00000001224	larp1b	63	98.834	Poecilia_mexicana
ENSPFOG00000022837	-	78	50.369	ENSPCAG00000007546	LARP1B	56	50.554	Procavia_capensis
ENSPFOG00000022837	-	77	52.799	ENSPCOG00000021874	LARP1B	97	53.172	Propithecus_coquereli
ENSPFOG00000022837	-	77	49.534	ENSPVAG00000005373	LARP1B	56	49.721	Pteropus_vampyrus
ENSPFOG00000022837	-	85	63.568	ENSPNAG00000008823	larp1b	58	49.347	Pygocentrus_nattereri
ENSPFOG00000022837	-	52	51.771	ENSRNOG00000038366	Larp1b	99	52.044	Rattus_norvegicus
ENSPFOG00000022837	-	53	44.444	ENSRBIG00000038568	-	88	46.875	Rhinopithecus_bieti
ENSPFOG00000022837	-	77	51.306	ENSRBIG00000039982	-	97	51.306	Rhinopithecus_bieti
ENSPFOG00000022837	-	78	51.099	ENSRROG00000030771	LARP1B	98	51.560	Rhinopithecus_roxellana
ENSPFOG00000022837	-	78	52.661	ENSSHAG00000014474	LARP1B	76	52.294	Sarcophilus_harrisii
ENSPFOG00000022837	-	83	75.130	ENSSMAG00000006347	larp1b	58	75.820	Scophthalmus_maximus
ENSPFOG00000022837	-	99	78.902	ENSSDUG00000004182	larp1b	62	78.613	Seriola_dumerili
ENSPFOG00000022837	-	85	76.250	ENSSLDG00000014613	larp1b	58	75.833	Seriola_lalandi_dorsalis
ENSPFOG00000022837	-	86	50.325	ENSSPUG00000011837	LARP1B	83	49.756	Sphenodon_punctatus
ENSPFOG00000022837	-	99	79.286	ENSSPAG00000017772	larp1b	62	79.286	Stegastes_partitus
ENSPFOG00000022837	-	85	48.167	ENSSSCG00000034280	LARP1B	97	50.000	Sus_scrofa
ENSPFOG00000022837	-	99	71.137	ENSTRUG00000005612	larp1b	63	68.659	Takifugu_rubripes
ENSPFOG00000022837	-	87	67.707	ENSTNIG00000012398	larp1b	56	77.538	Tetraodon_nigroviridis
ENSPFOG00000022837	-	52	46.111	ENSUAMG00000016938	-	96	47.564	Ursus_americanus
ENSPFOG00000022837	-	78	53.125	ENSUMAG00000007373	LARP1B	55	53.125	Ursus_maritimus
ENSPFOG00000022837	-	78	46.468	ENSVPAG00000007223	LARP1B	56	46.468	Vicugna_pacos
ENSPFOG00000022837	-	78	52.583	ENSVVUG00000011307	LARP1B	99	52.399	Vulpes_vulpes
ENSPFOG00000022837	-	88	45.514	ENSXETG00000022512	larp1b	56	46.341	Xenopus_tropicalis
ENSPFOG00000022837	-	76	97.600	ENSXCOG00000004435	larp1b	54	97.600	Xiphophorus_couchianus
ENSPFOG00000022837	-	99	96.361	ENSXMAG00000008150	larp1b	63	96.361	Xiphophorus_maculatus