EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000022993 (Gene tree)
Gene ID: 103144742
Gene Symbol: srsf5a
Alias: -
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 6324 bases
Position: chrKI519741.1:964322-970645
Accession: 103144742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000023287	RRM_1	PF00076.22	5.9e-32	1	2
ENSPFOP00000023287	RRM_1	PF00076.22	5.9e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000030380	-	2544	-	ENSPFOP00000023287	320 (aa)	XP_007561930	A0A096LVU6

Gene Model

Click here to download ENSPFOG00000022993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000022993's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000022993	srsf5a	57	40.323	ENSPFOG00000019792	srsf9	68	42.246
ENSPFOG00000022993	srsf5a	65	40.278	ENSPFOG00000018325	-	70	40.845
ENSPFOG00000022993	srsf5a	84	55.273	ENSPFOG00000017700	srsf5b	61	67.368
ENSPFOG00000022993	srsf5a	56	39.785	ENSPFOG00000009643	-	91	40.860
ENSPFOG00000022993	srsf5a	56	39.785	ENSPFOG00000009640	-	66	41.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000022993	srsf5a	78	68.273	ENSAPOG00000017395	srsf5a	80	78.039	Acanthochromis_polyacanthus
ENSPFOG00000022993	srsf5a	85	73.626	ENSACIG00000011892	srsf5a	98	75.714	Amphilophus_citrinellus
ENSPFOG00000022993	srsf5a	78	69.076	ENSAOCG00000014967	srsf5a	82	79.216	Amphiprion_ocellaris
ENSPFOG00000022993	srsf5a	78	69.076	ENSAPEG00000009297	srsf5a	82	79.216	Amphiprion_percula
ENSPFOG00000022993	srsf5a	88	75.972	ENSATEG00000000198	srsf5a	84	81.569	Anabas_testudineus
ENSPFOG00000022993	srsf5a	60	70.466	ENSAPLG00000002469	-	70	69.430	Anas_platyrhynchos
ENSPFOG00000022993	srsf5a	77	69.796	ENSACAG00000029015	-	68	70.157	Anolis_carolinensis
ENSPFOG00000022993	srsf5a	78	82.731	ENSACLG00000027166	srsf5a	82	83.137	Astatotilapia_calliptera
ENSPFOG00000022993	srsf5a	60	77.551	ENSAMXG00000030476	srsf5a	91	66.537	Astyanax_mexicanus
ENSPFOG00000022993	srsf5a	60	72.917	ENSCPBG00000021518	-	70	71.875	Chrysemys_picta_bellii
ENSPFOG00000022993	srsf5a	60	58.673	ENSCSAVG00000011376	-	78	58.586	Ciona_savignyi
ENSPFOG00000022993	srsf5a	79	83.465	ENSCSEG00000008109	srsf5a	79	82.879	Cynoglossus_semilaevis
ENSPFOG00000022993	srsf5a	78	94.024	ENSCVAG00000016982	srsf5a	98	95.556	Cyprinodon_variegatus
ENSPFOG00000022993	srsf5a	61	78.974	ENSDARG00000029818	srsf5a	100	75.000	Danio_rerio
ENSPFOG00000022993	srsf5a	78	64.751	ENSELUG00000020439	srsf5a	81	67.717	Esox_lucius
ENSPFOG00000022993	srsf5a	72	71.616	ENSFALG00000005098	-	64	70.157	Ficedula_albicollis
ENSPFOG00000022993	srsf5a	79	91.667	ENSFHEG00000003955	srsf5a	97	90.345	Fundulus_heteroclitus
ENSPFOG00000022993	srsf5a	60	79.581	ENSGMOG00000000869	srsf5a	94	78.534	Gadus_morhua
ENSPFOG00000022993	srsf5a	65	70.048	ENSGALG00000033259	SRSF5A	63	69.634	Gallus_gallus
ENSPFOG00000022993	srsf5a	93	79.677	ENSGAFG00000018237	srsf5a	94	79.355	Gambusia_affinis
ENSPFOG00000022993	srsf5a	60	82.199	ENSGACG00000011761	srsf5a	70	82.199	Gasterosteus_aculeatus
ENSPFOG00000022993	srsf5a	60	72.917	ENSGAGG00000007312	-	70	71.875	Gopherus_agassizii
ENSPFOG00000022993	srsf5a	78	82.731	ENSHBUG00000014048	srsf5a	82	83.529	Haplochromis_burtoni
ENSPFOG00000022993	srsf5a	60	83.770	ENSHCOG00000017557	srsf5a	62	83.770	Hippocampus_comes
ENSPFOG00000022993	srsf5a	60	80.628	ENSIPUG00000003439	srsf5a	69	80.628	Ictalurus_punctatus
ENSPFOG00000022993	srsf5a	60	83.770	ENSKMAG00000014937	srsf5a	91	76.677	Kryptolebias_marmoratus
ENSPFOG00000022993	srsf5a	60	85.641	ENSLBEG00000017153	srsf5a	74	85.641	Labrus_bergylta
ENSPFOG00000022993	srsf5a	60	74.869	ENSLACG00000017874	-	70	74.869	Latimeria_chalumnae
ENSPFOG00000022993	srsf5a	79	76.984	ENSMAMG00000000192	srsf5a	84	77.647	Mastacembelus_armatus
ENSPFOG00000022993	srsf5a	78	82.731	ENSMZEG00005010485	srsf5a	82	83.529	Maylandia_zebra
ENSPFOG00000022993	srsf5a	63	69.118	ENSMGAG00000011888	-	96	69.364	Meleagris_gallopavo
ENSPFOG00000022993	srsf5a	100	67.188	ENSMMOG00000009793	srsf5a	79	76.863	Mola_mola
ENSPFOG00000022993	srsf5a	90	70.035	ENSMALG00000021194	srsf5a	81	73.333	Monopterus_albus
ENSPFOG00000022993	srsf5a	78	82.329	ENSNBRG00000000771	srsf5a	82	82.745	Neolamprologus_brichardi
ENSPFOG00000022993	srsf5a	78	82.329	ENSONIG00000019583	srsf5a	82	82.745	Oreochromis_niloticus
ENSPFOG00000022993	srsf5a	78	81.526	ENSORLG00000009268	srsf5a	85	80.784	Oryzias_latipes
ENSPFOG00000022993	srsf5a	78	81.526	ENSORLG00020003281	srsf5	85	80.784	Oryzias_latipes_hni
ENSPFOG00000022993	srsf5a	78	81.526	ENSORLG00015023075	srsf5	85	80.784	Oryzias_latipes_hsok
ENSPFOG00000022993	srsf5a	78	81.526	ENSOMEG00000000628	srsf5a	85	81.176	Oryzias_melastigma
ENSPFOG00000022993	srsf5a	60	77.665	ENSPKIG00000002054	srsf5a	68	79.581	Paramormyrops_kingsleyae
ENSPFOG00000022993	srsf5a	77	67.886	ENSPSIG00000008238	-	69	69.271	Pelodiscus_sinensis
ENSPFOG00000022993	srsf5a	80	61.569	ENSPMGG00000020125	srsf5a	73	60.000	Periophthalmus_magnuspinnatus
ENSPFOG00000022993	srsf5a	99	100.000	ENSPLAG00000005508	srsf5a	99	100.000	Poecilia_latipinna
ENSPFOG00000022993	srsf5a	100	99.375	ENSPMEG00000016339	srsf5a	100	99.375	Poecilia_mexicana
ENSPFOG00000022993	srsf5a	100	97.508	ENSPREG00000018091	srsf5a	100	97.508	Poecilia_reticulata
ENSPFOG00000022993	srsf5a	78	82.731	ENSPNYG00000021245	srsf5a	82	83.529	Pundamilia_nyererei
ENSPFOG00000022993	srsf5a	60	79.058	ENSPNAG00000021333	srsf5a	66	79.058	Pygocentrus_nattereri
ENSPFOG00000022993	srsf5a	78	75.581	ENSSFOG00015008377	srsf5	66	80.105	Scleropages_formosus
ENSPFOG00000022993	srsf5a	84	75.540	ENSSMAG00000010899	srsf5a	66	85.500	Scophthalmus_maximus
ENSPFOG00000022993	srsf5a	79	67.063	ENSSDUG00000006103	srsf5a	82	77.647	Seriola_dumerili
ENSPFOG00000022993	srsf5a	79	67.460	ENSSLDG00000004146	srsf5a	81	78.039	Seriola_lalandi_dorsalis
ENSPFOG00000022993	srsf5a	60	68.586	ENSSPUG00000002052	-	68	67.016	Sphenodon_punctatus
ENSPFOG00000022993	srsf5a	78	76.707	ENSSPAG00000002821	srsf5a	82	77.647	Stegastes_partitus
ENSPFOG00000022993	srsf5a	72	72.052	ENSTGUG00000011492	-	68	70.157	Taeniopygia_guttata
ENSPFOG00000022993	srsf5a	100	66.563	ENSTRUG00000022908	srsf5a	83	80.078	Takifugu_rubripes
ENSPFOG00000022993	srsf5a	60	71.500	ENSXETG00000017937	srsf5a	72	75.521	Xenopus_tropicalis
ENSPFOG00000022993	srsf5a	100	80.625	ENSXCOG00000015338	srsf5a	100	90.402	Xiphophorus_couchianus
ENSPFOG00000022993	srsf5a	100	95.963	ENSXMAG00000012823	srsf5a	100	95.963	Xiphophorus_maculatus