EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000023343 (Gene tree)
Gene ID: 103139890
Gene Symbol: polr1d
Alias: -
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 11942 bases
Position: chrKI519676.1:586456-598397
Accession: 103139890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000029199	RNA_pol_L_2	PF13656.6	6e-30	1	1
ENSPFOP00000025404	RNA_pol_L_2	PF13656.6	3.2e-28	1	1
ENSPFOP00000029199	RNA_pol_L	PF01193.24	1e-12	1	1
ENSPFOP00000025404	RNA_pol_L	PF01193.24	7.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000030980	-	3119	-	ENSPFOP00000029199	114 (aa)	XP_007554821	A0A096MCQ8
ENSPFOT00000028084	-	3120	-	ENSPFOP00000025404	87 (aa)	-	A0A096M1W3

Gene Model

Click here to download ENSPFOG00000023343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000023343's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000023343	polr1d	95	34.940	ENSPFOG00000012001	polr2j	88	33.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000023343	polr1d	92	73.750	ENSG00000186184	POLR1D	91	72.381	Homo_sapiens
ENSPFOG00000023343	polr1d	90	84.466	ENSAPOG00000021882	polr1d	97	84.466	Acanthochromis_polyacanthus
ENSPFOG00000023343	polr1d	92	75.000	ENSAMEG00000019095	POLR1D	84	73.333	Ailuropoda_melanoleuca
ENSPFOG00000023343	polr1d	100	84.348	ENSACIG00000013328	polr1d	100	84.348	Amphilophus_citrinellus
ENSPFOG00000023343	polr1d	100	84.211	ENSAOCG00000018500	polr1d	100	84.211	Amphiprion_ocellaris
ENSPFOG00000023343	polr1d	100	85.088	ENSAPEG00000009489	polr1d	100	85.088	Amphiprion_percula
ENSPFOG00000023343	polr1d	100	87.719	ENSATEG00000019322	polr1d	100	87.719	Anabas_testudineus
ENSPFOG00000023343	polr1d	62	77.778	ENSAPLG00000012757	POLR1D	100	77.778	Anas_platyrhynchos
ENSPFOG00000023343	polr1d	100	70.115	ENSACAG00000015753	POLR1D	96	66.667	Anolis_carolinensis
ENSPFOG00000023343	polr1d	92	73.750	ENSANAG00000024486	POLR1D	79	72.381	Aotus_nancymaae
ENSPFOG00000023343	polr1d	100	89.474	ENSACLG00000023805	polr1d	100	89.474	Astatotilapia_calliptera
ENSPFOG00000023343	polr1d	100	75.862	ENSAMXG00000036118	polr1d	98	76.106	Astyanax_mexicanus
ENSPFOG00000023343	polr1d	92	75.000	ENSBTAG00000033252	-	79	73.333	Bos_taurus
ENSPFOG00000023343	polr1d	92	75.000	ENSBTAG00000008642	POLR1D	79	73.333	Bos_taurus
ENSPFOG00000023343	polr1d	83	40.278	WBGene00010230	rpac-19	56	38.750	Caenorhabditis_elegans
ENSPFOG00000023343	polr1d	92	75.000	ENSCJAG00000044669	POLR1D	79	73.333	Callithrix_jacchus
ENSPFOG00000023343	polr1d	92	75.000	ENSCAFG00000006755	POLR1D	79	73.333	Canis_familiaris
ENSPFOG00000023343	polr1d	92	73.750	ENSCHIG00000021910	POLR1D	79	72.381	Capra_hircus
ENSPFOG00000023343	polr1d	91	63.208	ENSTSYG00000034852	-	88	63.208	Carlito_syrichta
ENSPFOG00000023343	polr1d	92	75.000	ENSTSYG00000026817	-	78	74.038	Carlito_syrichta
ENSPFOG00000023343	polr1d	74	60.938	ENSCAPG00000006058	-	65	60.938	Cavia_aperea
ENSPFOG00000023343	polr1d	74	60.938	ENSCPOG00000030450	-	65	60.938	Cavia_porcellus
ENSPFOG00000023343	polr1d	92	75.000	ENSCCAG00000021349	-	79	73.333	Cebus_capucinus
ENSPFOG00000023343	polr1d	89	64.935	ENSCCAG00000020191	-	76	56.190	Cebus_capucinus
ENSPFOG00000023343	polr1d	91	68.354	ENSCATG00000022900	-	77	62.500	Cercocebus_atys
ENSPFOG00000023343	polr1d	92	73.750	ENSCATG00000030710	-	79	72.381	Cercocebus_atys
ENSPFOG00000023343	polr1d	92	73.750	ENSCLAG00000017623	POLR1D	85	72.381	Chinchilla_lanigera
ENSPFOG00000023343	polr1d	89	78.218	ENSCPBG00000004719	POLR1D	100	78.218	Chrysemys_picta_bellii
ENSPFOG00000023343	polr1d	92	73.750	ENSCANG00000028632	-	79	72.381	Colobus_angolensis_palliatus
ENSPFOG00000023343	polr1d	92	72.500	ENSCANG00000037694	-	78	72.115	Colobus_angolensis_palliatus
ENSPFOG00000023343	polr1d	92	73.750	ENSCGRG00001021251	Polr1d	79	72.381	Cricetulus_griseus_chok1gshd
ENSPFOG00000023343	polr1d	92	73.750	ENSCGRG00000011639	Polr1d	79	72.381	Cricetulus_griseus_crigri
ENSPFOG00000023343	polr1d	93	85.849	ENSCSEG00000018268	polr1d	100	82.906	Cynoglossus_semilaevis
ENSPFOG00000023343	polr1d	100	91.228	ENSCVAG00000018527	polr1d	100	91.228	Cyprinodon_variegatus
ENSPFOG00000023343	polr1d	99	76.744	ENSDARG00000037570	polr1d	95	75.701	Danio_rerio
ENSPFOG00000023343	polr1d	92	72.500	ENSDNOG00000043676	-	79	71.429	Dasypus_novemcinctus
ENSPFOG00000023343	polr1d	92	71.250	ENSDNOG00000046247	-	78	70.476	Dasypus_novemcinctus
ENSPFOG00000023343	polr1d	91	74.684	ENSDORG00000029155	Polr1d	78	73.077	Dipodomys_ordii
ENSPFOG00000023343	polr1d	87	51.316	FBgn0086447	l(2)37Cg	80	50.588	Drosophila_melanogaster
ENSPFOG00000023343	polr1d	92	73.750	ENSETEG00000012797	POLR1D	85	72.381	Echinops_telfairi
ENSPFOG00000023343	polr1d	84	68.493	ENSEBUG00000011748	polr1d	64	65.217	Eptatretus_burgeri
ENSPFOG00000023343	polr1d	92	75.000	ENSEASG00005022487	POLR1D	81	73.333	Equus_asinus_asinus
ENSPFOG00000023343	polr1d	92	75.000	ENSEEUG00000013144	POLR1D	85	73.333	Erinaceus_europaeus
ENSPFOG00000023343	polr1d	97	78.571	ENSELUG00000005105	rpac2	98	78.571	Esox_lucius
ENSPFOG00000023343	polr1d	92	75.000	ENSFCAG00000030162	POLR1D	79	73.333	Felis_catus
ENSPFOG00000023343	polr1d	99	74.419	ENSFALG00000011463	POLR1D	99	75.000	Ficedula_albicollis
ENSPFOG00000023343	polr1d	92	72.500	ENSFDAG00000004463	POLR1D	79	71.429	Fukomys_damarensis
ENSPFOG00000023343	polr1d	100	90.351	ENSFHEG00000015410	polr1d	99	90.351	Fundulus_heteroclitus
ENSPFOG00000023343	polr1d	79	65.217	ENSGALG00000007470	POLR1D	68	65.217	Gallus_gallus
ENSPFOG00000023343	polr1d	100	100.000	ENSGAFG00000001693	polr1d	100	99.123	Gambusia_affinis
ENSPFOG00000023343	polr1d	94	87.850	ENSGACG00000018585	polr1d	91	87.850	Gasterosteus_aculeatus
ENSPFOG00000023343	polr1d	100	77.193	ENSGAGG00000008503	POLR1D	100	77.193	Gopherus_agassizii
ENSPFOG00000023343	polr1d	92	73.750	ENSGGOG00000004235	POLR1D	79	72.381	Gorilla_gorilla
ENSPFOG00000023343	polr1d	100	89.474	ENSHBUG00000002111	polr1d	100	89.474	Haplochromis_burtoni
ENSPFOG00000023343	polr1d	92	71.250	ENSHGLG00000003202	POLR1D	79	70.476	Heterocephalus_glaber_female
ENSPFOG00000023343	polr1d	92	71.250	ENSHGLG00100009393	POLR1D	79	70.476	Heterocephalus_glaber_male
ENSPFOG00000023343	polr1d	100	83.908	ENSHCOG00000003258	polr1d	100	82.456	Hippocampus_comes
ENSPFOG00000023343	polr1d	100	79.130	ENSIPUG00000014810	polr1d	100	79.130	Ictalurus_punctatus
ENSPFOG00000023343	polr1d	92	73.750	ENSSTOG00000013877	POLR1D	79	72.381	Ictidomys_tridecemlineatus
ENSPFOG00000023343	polr1d	92	71.250	ENSJJAG00000022671	-	88	70.476	Jaculus_jaculus
ENSPFOG00000023343	polr1d	92	55.238	ENSJJAG00000021667	-	61	55.238	Jaculus_jaculus
ENSPFOG00000023343	polr1d	100	90.805	ENSKMAG00000015256	polr1d	100	87.719	Kryptolebias_marmoratus
ENSPFOG00000023343	polr1d	100	87.719	ENSLBEG00000015919	polr1d	100	87.719	Labrus_bergylta
ENSPFOG00000023343	polr1d	97	73.810	ENSLACG00000006810	POLR1D	90	67.593	Latimeria_chalumnae
ENSPFOG00000023343	polr1d	62	85.915	ENSLOCG00000014976	polr1d	96	85.915	Lepisosteus_oculatus
ENSPFOG00000023343	polr1d	92	73.750	ENSLAFG00000032290	POLR1D	80	71.698	Loxodonta_africana
ENSPFOG00000023343	polr1d	92	73.750	ENSMFAG00000045264	POLR1D	81	72.381	Macaca_fascicularis
ENSPFOG00000023343	polr1d	91	69.620	ENSMMUG00000041570	-	71	69.620	Macaca_mulatta
ENSPFOG00000023343	polr1d	92	73.750	ENSMMUG00000020386	POLR1D	91	72.381	Macaca_mulatta
ENSPFOG00000023343	polr1d	92	73.750	ENSMNEG00000008630	-	79	72.381	Macaca_nemestrina
ENSPFOG00000023343	polr1d	91	68.354	ENSMNEG00000038120	-	76	58.654	Macaca_nemestrina
ENSPFOG00000023343	polr1d	92	73.750	ENSMLEG00000041048	-	79	72.381	Mandrillus_leucophaeus
ENSPFOG00000023343	polr1d	91	68.354	ENSMLEG00000032251	-	77	64.423	Mandrillus_leucophaeus
ENSPFOG00000023343	polr1d	88	89.000	ENSMAMG00000014834	polr1d	93	89.000	Mastacembelus_armatus
ENSPFOG00000023343	polr1d	91	85.577	ENSMZEG00005006638	polr1d	92	85.577	Maylandia_zebra
ENSPFOG00000023343	polr1d	86	81.333	ENSMGAG00000005322	POLR1D	84	79.348	Meleagris_gallopavo
ENSPFOG00000023343	polr1d	92	73.750	ENSMAUG00000001946	Polr1d	79	72.381	Mesocricetus_auratus
ENSPFOG00000023343	polr1d	92	72.500	ENSMICG00000016883	-	79	71.429	Microcebus_murinus
ENSPFOG00000023343	polr1d	86	59.184	ENSMICG00000007349	-	73	59.184	Microcebus_murinus
ENSPFOG00000023343	polr1d	92	72.500	ENSMOCG00000021288	Polr1d	79	71.429	Microtus_ochrogaster
ENSPFOG00000023343	polr1d	100	90.351	ENSMMOG00000009605	polr1d	100	90.351	Mola_mola
ENSPFOG00000023343	polr1d	100	75.862	ENSMODG00000023881	POLR1D	100	75.439	Monodelphis_domestica
ENSPFOG00000023343	polr1d	100	86.207	ENSMALG00000010652	polr1d	100	85.088	Monopterus_albus
ENSPFOG00000023343	polr1d	91	72.152	MGP_CAROLIEiJ_G0028034	Polr1d	78	71.154	Mus_caroli
ENSPFOG00000023343	polr1d	91	72.152	ENSMUSG00000029642	Polr1d	78	71.154	Mus_musculus
ENSPFOG00000023343	polr1d	91	72.152	MGP_PahariEiJ_G0024600	Polr1d	78	71.154	Mus_pahari
ENSPFOG00000023343	polr1d	100	66.667	MGP_SPRETEiJ_G0029032	Polr1d	78	71.154	Mus_spretus
ENSPFOG00000023343	polr1d	92	71.250	ENSMLUG00000004118	-	79	66.667	Myotis_lucifugus
ENSPFOG00000023343	polr1d	92	73.750	ENSMLUG00000027169	-	79	72.381	Myotis_lucifugus
ENSPFOG00000023343	polr1d	98	69.643	ENSNGAG00000006014	Polr1d	97	69.643	Nannospalax_galili
ENSPFOG00000023343	polr1d	100	89.474	ENSNBRG00000020327	polr1d	100	89.474	Neolamprologus_brichardi
ENSPFOG00000023343	polr1d	92	73.750	ENSNLEG00000000358	POLR1D	79	72.381	Nomascus_leucogenys
ENSPFOG00000023343	polr1d	89	70.130	ENSODEG00000014801	-	76	60.952	Octodon_degus
ENSPFOG00000023343	polr1d	92	73.750	ENSODEG00000005294	-	79	72.381	Octodon_degus
ENSPFOG00000023343	polr1d	100	78.161	ENSOANG00000008708	-	98	80.189	Ornithorhynchus_anatinus
ENSPFOG00000023343	polr1d	92	73.750	ENSOCUG00000015706	POLR1D	64	72.381	Oryctolagus_cuniculus
ENSPFOG00000023343	polr1d	100	86.207	ENSORLG00000010257	polr1d	100	85.088	Oryzias_latipes
ENSPFOG00000023343	polr1d	100	86.207	ENSORLG00020000533	polr1d	77	85.088	Oryzias_latipes_hni
ENSPFOG00000023343	polr1d	100	87.356	ENSORLG00015013267	polr1d	75	85.965	Oryzias_latipes_hsok
ENSPFOG00000023343	polr1d	100	86.207	ENSOMEG00000014912	polr1d	76	85.088	Oryzias_melastigma
ENSPFOG00000023343	polr1d	100	70.115	ENSOGAG00000014601	POLR1D	84	69.643	Otolemur_garnettii
ENSPFOG00000023343	polr1d	92	73.750	ENSOARG00000017005	POLR1D	81	72.381	Ovis_aries
ENSPFOG00000023343	polr1d	92	73.750	ENSPPAG00000028138	POLR1D	79	72.381	Pan_paniscus
ENSPFOG00000023343	polr1d	92	75.000	ENSPPRG00000003381	POLR1D	79	73.333	Panthera_pardus
ENSPFOG00000023343	polr1d	92	75.000	ENSPTIG00000018137	POLR1D	79	73.333	Panthera_tigris_altaica
ENSPFOG00000023343	polr1d	92	73.750	ENSPTRG00000005734	POLR1D	79	72.381	Pan_troglodytes
ENSPFOG00000023343	polr1d	91	68.354	ENSPANG00000035051	-	77	63.462	Papio_anubis
ENSPFOG00000023343	polr1d	92	73.750	ENSPANG00000020259	-	79	72.381	Papio_anubis
ENSPFOG00000023343	polr1d	100	80.460	ENSPKIG00000021891	polr1d	100	62.205	Paramormyrops_kingsleyae
ENSPFOG00000023343	polr1d	100	74.713	ENSPSIG00000011822	POLR1D	88	73.684	Pelodiscus_sinensis
ENSPFOG00000023343	polr1d	100	84.211	ENSPMGG00000010359	polr1d	99	84.211	Periophthalmus_magnuspinnatus
ENSPFOG00000023343	polr1d	100	76.316	ENSPMGG00000012998	POLR1D	84	76.316	Periophthalmus_magnuspinnatus
ENSPFOG00000023343	polr1d	92	72.500	ENSPEMG00000006336	-	81	71.429	Peromyscus_maniculatus_bairdii
ENSPFOG00000023343	polr1d	100	58.621	ENSPMAG00000004228	polr1d	91	56.481	Petromyzon_marinus
ENSPFOG00000023343	polr1d	100	74.713	ENSPCIG00000001673	POLR1D	100	74.561	Phascolarctos_cinereus
ENSPFOG00000023343	polr1d	100	100.000	ENSPLAG00000009675	polr1d	100	100.000	Poecilia_latipinna
ENSPFOG00000023343	polr1d	100	100.000	ENSPMEG00000004628	polr1d	100	100.000	Poecilia_mexicana
ENSPFOG00000023343	polr1d	100	100.000	ENSPREG00000022032	polr1d	100	100.000	Poecilia_reticulata
ENSPFOG00000023343	polr1d	92	71.250	ENSPCOG00000028175	POLR1D	79	70.476	Propithecus_coquereli
ENSPFOG00000023343	polr1d	100	89.474	ENSPNYG00000000107	polr1d	100	89.474	Pundamilia_nyererei
ENSPFOG00000023343	polr1d	100	71.264	ENSPNAG00000001512	polr1d	100	69.748	Pygocentrus_nattereri
ENSPFOG00000023343	polr1d	92	73.750	ENSRBIG00000036378	-	79	72.381	Rhinopithecus_bieti
ENSPFOG00000023343	polr1d	92	70.000	ENSRBIG00000000336	-	78	70.192	Rhinopithecus_bieti
ENSPFOG00000023343	polr1d	92	71.250	ENSRROG00000026751	-	78	71.154	Rhinopithecus_roxellana
ENSPFOG00000023343	polr1d	92	73.750	ENSRROG00000042232	-	79	72.381	Rhinopithecus_roxellana
ENSPFOG00000023343	polr1d	84	58.904	YNL113W	RPC19	70	48.485	Saccharomyces_cerevisiae
ENSPFOG00000023343	polr1d	85	72.973	ENSSBOG00000030146	-	73	69.697	Saimiri_boliviensis_boliviensis
ENSPFOG00000023343	polr1d	92	73.750	ENSSBOG00000028482	-	79	72.381	Saimiri_boliviensis_boliviensis
ENSPFOG00000023343	polr1d	97	73.810	ENSSHAG00000001190	POLR1D	86	72.973	Sarcophilus_harrisii
ENSPFOG00000023343	polr1d	94	79.630	ENSSFOG00015011375	polr1d	95	79.630	Scleropages_formosus
ENSPFOG00000023343	polr1d	100	88.596	ENSSMAG00000011861	polr1d	100	88.596	Scophthalmus_maximus
ENSPFOG00000023343	polr1d	100	87.719	ENSSDUG00000011930	polr1d	100	87.719	Seriola_dumerili
ENSPFOG00000023343	polr1d	99	79.825	ENSSLDG00000023871	polr1d	97	79.825	Seriola_lalandi_dorsalis
ENSPFOG00000023343	polr1d	92	75.000	ENSSARG00000007840	POLR1D	79	73.333	Sorex_araneus
ENSPFOG00000023343	polr1d	100	71.264	ENSSPUG00000005786	POLR1D	95	70.270	Sphenodon_punctatus
ENSPFOG00000023343	polr1d	100	88.596	ENSSPAG00000011764	polr1d	100	88.596	Stegastes_partitus
ENSPFOG00000023343	polr1d	92	72.500	ENSSSCG00000009310	POLR1D	79	71.429	Sus_scrofa
ENSPFOG00000023343	polr1d	91	79.747	ENSTGUG00000005450	POLR1D	97	78.495	Taeniopygia_guttata
ENSPFOG00000023343	polr1d	100	82.456	ENSTRUG00000019741	polr1d	100	82.456	Takifugu_rubripes
ENSPFOG00000023343	polr1d	100	68.966	ENSTBEG00000007006	POLR1D	90	68.750	Tupaia_belangeri
ENSPFOG00000023343	polr1d	92	75.000	ENSUAMG00000011413	POLR1D	79	73.333	Ursus_americanus
ENSPFOG00000023343	polr1d	92	75.000	ENSUMAG00000016968	POLR1D	82	73.333	Ursus_maritimus
ENSPFOG00000023343	polr1d	92	75.000	ENSVVUG00000009216	POLR1D	79	73.333	Vulpes_vulpes
ENSPFOG00000023343	polr1d	89	98.020	ENSXCOG00000011731	polr1d	78	98.020	Xiphophorus_couchianus
ENSPFOG00000023343	polr1d	89	97.030	ENSXMAG00000017538	polr1d	78	97.030	Xiphophorus_maculatus