EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000023411 (Gene tree)
Gene ID: 103140859
Gene Symbol: rad54b
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 16297 bases
Position: chrKI519687.1:1687993-1704289
Accession: 103140859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000030836	ResIII	PF04851.15	2.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000031032	-	3365	XM_007556204	ENSPFOP00000030836	937 (aa)	XP_007556266	A0A096MHE5

Gene Model

Click here to download ENSPFOG00000023411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000023411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000023411	rad54b	53	35.319	ENSPFOG00000001954	hells	55	35.319
ENSPFOG00000023411	rad54b	64	45.041	ENSPFOG00000013732	rad54l	95	44.788

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000023411	rad54b	99	55.000	ENSG00000197275	RAD54B	99	55.000	Homo_sapiens
ENSPFOG00000023411	rad54b	77	59.946	ENSG00000265817	FSBP	99	59.946	Homo_sapiens
ENSPFOG00000023411	rad54b	99	55.319	ENSAMEG00000005834	-	99	55.319	Ailuropoda_melanoleuca
ENSPFOG00000023411	rad54b	99	78.326	ENSACIG00000013005	rad54b	99	78.326	Amphilophus_citrinellus
ENSPFOG00000023411	rad54b	99	82.265	ENSAOCG00000008523	rad54b	99	82.265	Amphiprion_ocellaris
ENSPFOG00000023411	rad54b	99	73.840	ENSAPEG00000001673	rad54b	99	75.080	Amphiprion_percula
ENSPFOG00000023411	rad54b	98	83.578	ENSATEG00000001527	rad54b	99	83.578	Anabas_testudineus
ENSPFOG00000023411	rad54b	100	57.712	ENSAPLG00000014366	-	100	57.712	Anas_platyrhynchos
ENSPFOG00000023411	rad54b	84	61.090	ENSACAG00000003671	-	98	61.090	Anolis_carolinensis
ENSPFOG00000023411	rad54b	68	61.646	ENSANAG00000019528	-	99	61.646	Aotus_nancymaae
ENSPFOG00000023411	rad54b	90	86.709	ENSACLG00000007826	rad54b	97	86.709	Astatotilapia_calliptera
ENSPFOG00000023411	rad54b	83	68.488	ENSAMXG00000039985	rad54b	95	68.125	Astyanax_mexicanus
ENSPFOG00000023411	rad54b	99	56.064	ENSBTAG00000000632	RAD54B	99	56.064	Bos_taurus
ENSPFOG00000023411	rad54b	75	36.474	WBGene00013792	Y116A8C.13	97	34.415	Caenorhabditis_elegans
ENSPFOG00000023411	rad54b	99	54.555	ENSCJAG00000000080	-	99	59.673	Callithrix_jacchus
ENSPFOG00000023411	rad54b	99	55.732	ENSCAFG00000009179	RAD54B	99	55.732	Canis_familiaris
ENSPFOG00000023411	rad54b	99	55.732	ENSCAFG00020012084	-	99	55.732	Canis_lupus_dingo
ENSPFOG00000023411	rad54b	99	55.957	ENSCHIG00000008230	-	99	55.957	Capra_hircus
ENSPFOG00000023411	rad54b	99	54.890	ENSTSYG00000013234	-	99	55.121	Carlito_syrichta
ENSPFOG00000023411	rad54b	100	54.478	ENSCPOG00000011643	-	100	54.478	Cavia_porcellus
ENSPFOG00000023411	rad54b	99	54.362	ENSCCAG00000011754	-	99	59.537	Cebus_capucinus
ENSPFOG00000023411	rad54b	99	55.059	ENSCATG00000030661	-	99	60.027	Cercocebus_atys
ENSPFOG00000023411	rad54b	99	54.842	ENSCLAG00000010476	-	99	55.074	Chinchilla_lanigera
ENSPFOG00000023411	rad54b	99	54.846	ENSCSAG00000012712	-	99	54.846	Chlorocebus_sabaeus
ENSPFOG00000023411	rad54b	99	57.705	ENSCPBG00000003204	-	98	59.491	Chrysemys_picta_bellii
ENSPFOG00000023411	rad54b	99	55.059	ENSCANG00000017939	-	99	60.300	Colobus_angolensis_palliatus
ENSPFOG00000023411	rad54b	99	54.180	ENSCGRG00001020184	Rad54b	99	54.180	Cricetulus_griseus_chok1gshd
ENSPFOG00000023411	rad54b	99	53.010	ENSCGRG00000016752	Rad54b	99	53.010	Cricetulus_griseus_crigri
ENSPFOG00000023411	rad54b	92	80.123	ENSCSEG00000001601	rad54b	99	80.123	Cynoglossus_semilaevis
ENSPFOG00000023411	rad54b	99	82.618	ENSCVAG00000009200	rad54b	99	82.618	Cyprinodon_variegatus
ENSPFOG00000023411	rad54b	99	61.774	ENSDARG00000092134	rad54b	99	68.692	Danio_rerio
ENSPFOG00000023411	rad54b	99	55.708	ENSDNOG00000015535	-	99	55.708	Dasypus_novemcinctus
ENSPFOG00000023411	rad54b	99	55.710	ENSDORG00000002492	Rad54b	99	55.710	Dipodomys_ordii
ENSPFOG00000023411	rad54b	87	57.927	ENSETEG00000010605	-	100	58.171	Echinops_telfairi
ENSPFOG00000023411	rad54b	100	47.144	ENSEBUG00000009104	rad54b	99	47.144	Eptatretus_burgeri
ENSPFOG00000023411	rad54b	84	60.375	ENSEASG00005004021	-	89	60.375	Equus_asinus_asinus
ENSPFOG00000023411	rad54b	99	54.984	ENSECAG00000021949	-	99	54.984	Equus_caballus
ENSPFOG00000023411	rad54b	70	52.174	ENSEEUG00000008056	-	72	52.174	Erinaceus_europaeus
ENSPFOG00000023411	rad54b	99	71.099	ENSELUG00000009287	rad54b	99	71.158	Esox_lucius
ENSPFOG00000023411	rad54b	99	55.249	ENSFCAG00000015513	-	99	60.408	Felis_catus
ENSPFOG00000023411	rad54b	99	57.384	ENSFALG00000005467	-	99	57.384	Ficedula_albicollis
ENSPFOG00000023411	rad54b	99	55.485	ENSFDAG00000020541	-	99	55.485	Fukomys_damarensis
ENSPFOG00000023411	rad54b	88	85.680	ENSFHEG00000014382	rad54b	90	86.044	Fundulus_heteroclitus
ENSPFOG00000023411	rad54b	84	79.721	ENSGMOG00000014774	rad54b	98	79.721	Gadus_morhua
ENSPFOG00000023411	rad54b	100	57.218	ENSGALG00000043597	RAD54B	100	57.113	Gallus_gallus
ENSPFOG00000023411	rad54b	100	95.411	ENSGAFG00000007901	rad54b	100	95.411	Gambusia_affinis
ENSPFOG00000023411	rad54b	99	75.106	ENSGACG00000009128	rad54b	99	75.106	Gasterosteus_aculeatus
ENSPFOG00000023411	rad54b	99	57.778	ENSGAGG00000018747	-	99	57.989	Gopherus_agassizii
ENSPFOG00000023411	rad54b	99	54.883	ENSGGOG00000023516	-	99	54.883	Gorilla_gorilla
ENSPFOG00000023411	rad54b	99	81.925	ENSHBUG00000016017	rad54b	99	81.925	Haplochromis_burtoni
ENSPFOG00000023411	rad54b	99	55.016	ENSHGLG00000008263	RAD54B	98	55.016	Heterocephalus_glaber_female
ENSPFOG00000023411	rad54b	99	54.355	ENSHGLG00100008108	-	98	54.355	Heterocephalus_glaber_male
ENSPFOG00000023411	rad54b	99	70.374	ENSHCOG00000004764	rad54b	98	74.629	Hippocampus_comes
ENSPFOG00000023411	rad54b	99	61.203	ENSIPUG00000018531	rad54b	99	61.203	Ictalurus_punctatus
ENSPFOG00000023411	rad54b	99	53.895	ENSSTOG00000010791	-	99	53.895	Ictidomys_tridecemlineatus
ENSPFOG00000023411	rad54b	99	54.429	ENSJJAG00000010314	Rad54b	99	54.429	Jaculus_jaculus
ENSPFOG00000023411	rad54b	84	84.694	ENSKMAG00000004744	rad54b	91	84.694	Kryptolebias_marmoratus
ENSPFOG00000023411	rad54b	80	64.847	ENSLACG00000000859	-	100	64.847	Latimeria_chalumnae
ENSPFOG00000023411	rad54b	99	63.561	ENSLOCG00000010100	rad54b	99	68.316	Lepisosteus_oculatus
ENSPFOG00000023411	rad54b	84	59.217	ENSLAFG00000015315	-	97	59.217	Loxodonta_africana
ENSPFOG00000023411	rad54b	99	55.059	ENSMFAG00000031629	-	99	60.027	Macaca_fascicularis
ENSPFOG00000023411	rad54b	99	55.059	ENSMMUG00000005659	-	99	55.059	Macaca_mulatta
ENSPFOG00000023411	rad54b	99	54.873	ENSMNEG00000016408	-	99	54.873	Macaca_nemestrina
ENSPFOG00000023411	rad54b	99	55.059	ENSMLEG00000006946	-	99	55.059	Mandrillus_leucophaeus
ENSPFOG00000023411	rad54b	99	75.080	ENSMAMG00000012269	rad54b	99	75.080	Mastacembelus_armatus
ENSPFOG00000023411	rad54b	99	81.818	ENSMZEG00005005281	rad54b	95	86.582	Maylandia_zebra
ENSPFOG00000023411	rad54b	100	56.757	ENSMGAG00000012024	-	100	56.653	Meleagris_gallopavo
ENSPFOG00000023411	rad54b	99	54.633	ENSMAUG00000013586	Rad54b	99	54.633	Mesocricetus_auratus
ENSPFOG00000023411	rad54b	84	60.100	ENSMICG00000000754	-	90	60.100	Microcebus_murinus
ENSPFOG00000023411	rad54b	100	53.805	ENSMOCG00000020035	Rad54b	100	53.805	Microtus_ochrogaster
ENSPFOG00000023411	rad54b	90	82.780	ENSMMOG00000003394	rad54b	96	82.780	Mola_mola
ENSPFOG00000023411	rad54b	85	59.227	ENSMODG00000007343	-	98	59.227	Monodelphis_domestica
ENSPFOG00000023411	rad54b	68	84.867	ENSMALG00000001520	rad54b	99	84.867	Monopterus_albus
ENSPFOG00000023411	rad54b	99	53.733	MGP_CAROLIEiJ_G0025810	Rad54b	99	53.943	Mus_caroli
ENSPFOG00000023411	rad54b	99	53.095	ENSMUSG00000078773	Rad54b	99	53.095	Mus_musculus
ENSPFOG00000023411	rad54b	99	54.468	MGP_PahariEiJ_G0023933	Rad54b	99	54.180	Mus_pahari
ENSPFOG00000023411	rad54b	99	53.466	MGP_SPRETEiJ_G0026758	Rad54b	99	53.466	Mus_spretus
ENSPFOG00000023411	rad54b	84	60.076	ENSMPUG00000008878	-	97	60.076	Mustela_putorius_furo
ENSPFOG00000023411	rad54b	99	54.815	ENSMLUG00000008953	-	99	54.815	Myotis_lucifugus
ENSPFOG00000023411	rad54b	99	54.074	ENSNGAG00000017537	Rad54b	99	54.065	Nannospalax_galili
ENSPFOG00000023411	rad54b	91	85.608	ENSNBRG00000013394	rad54b	99	85.608	Neolamprologus_brichardi
ENSPFOG00000023411	rad54b	100	54.219	ENSNLEG00000003062	-	100	59.405	Nomascus_leucogenys
ENSPFOG00000023411	rad54b	70	61.314	ENSMEUG00000012426	-	72	61.314	Notamacropus_eugenii
ENSPFOG00000023411	rad54b	99	55.614	ENSODEG00000019564	-	99	55.626	Octodon_degus
ENSPFOG00000023411	rad54b	77	77.273	ENSODEG00000002650	-	96	77.273	Octodon_degus
ENSPFOG00000023411	rad54b	99	82.585	ENSONIG00000006067	rad54b	99	82.623	Oreochromis_niloticus
ENSPFOG00000023411	rad54b	80	61.155	ENSOANG00000011348	-	99	61.155	Ornithorhynchus_anatinus
ENSPFOG00000023411	rad54b	99	54.767	ENSOCUG00000016478	-	99	54.767	Oryctolagus_cuniculus
ENSPFOG00000023411	rad54b	99	79.553	ENSORLG00000008918	rad54b	99	85.981	Oryzias_latipes
ENSPFOG00000023411	rad54b	68	85.981	ENSORLG00020012171	rad54b	99	85.981	Oryzias_latipes_hni
ENSPFOG00000023411	rad54b	99	78.959	ENSORLG00015018536	rad54b	99	78.959	Oryzias_latipes_hsok
ENSPFOG00000023411	rad54b	82	84.545	ENSOMEG00000004345	rad54b	99	84.545	Oryzias_melastigma
ENSPFOG00000023411	rad54b	99	53.115	ENSOGAG00000007854	-	99	53.568	Otolemur_garnettii
ENSPFOG00000023411	rad54b	85	61.471	ENSOARG00000007691	-	98	61.471	Ovis_aries
ENSPFOG00000023411	rad54b	99	53.404	ENSPPAG00000029572	-	99	53.404	Pan_paniscus
ENSPFOG00000023411	rad54b	99	55.461	ENSPPRG00000007571	-	99	60.462	Panthera_pardus
ENSPFOG00000023411	rad54b	78	60.462	ENSPTIG00000012670	-	99	60.462	Panthera_tigris_altaica
ENSPFOG00000023411	rad54b	99	54.574	ENSPTRG00000020427	-	99	59.537	Pan_troglodytes
ENSPFOG00000023411	rad54b	99	55.059	ENSPANG00000019566	-	99	55.059	Papio_anubis
ENSPFOG00000023411	rad54b	99	63.598	ENSPKIG00000014974	rad54b	99	63.836	Paramormyrops_kingsleyae
ENSPFOG00000023411	rad54b	99	57.006	ENSPSIG00000002383	-	95	63.338	Pelodiscus_sinensis
ENSPFOG00000023411	rad54b	99	54.863	ENSPEMG00000012133	Rad54b	99	54.863	Peromyscus_maniculatus_bairdii
ENSPFOG00000023411	rad54b	84	58.764	ENSPMAG00000002916	rad54b	98	58.638	Petromyzon_marinus
ENSPFOG00000023411	rad54b	87	59.174	ENSPCIG00000020151	-	93	59.390	Phascolarctos_cinereus
ENSPFOG00000023411	rad54b	100	99.360	ENSPLAG00000010430	rad54b	100	99.360	Poecilia_latipinna
ENSPFOG00000023411	rad54b	100	99.573	ENSPMEG00000016873	rad54b	100	99.573	Poecilia_mexicana
ENSPFOG00000023411	rad54b	100	97.012	ENSPREG00000018443	rad54b	100	97.012	Poecilia_reticulata
ENSPFOG00000023411	rad54b	99	54.017	ENSPPYG00000018750	-	99	54.017	Pongo_abelii
ENSPFOG00000023411	rad54b	99	54.910	ENSPCOG00000026845	-	99	59.647	Propithecus_coquereli
ENSPFOG00000023411	rad54b	79	59.600	ENSPVAG00000000261	-	86	59.600	Pteropus_vampyrus
ENSPFOG00000023411	rad54b	84	84.071	ENSPNYG00000018303	rad54b	96	83.965	Pundamilia_nyererei
ENSPFOG00000023411	rad54b	99	63.330	ENSPNAG00000000295	rad54b	99	63.330	Pygocentrus_nattereri
ENSPFOG00000023411	rad54b	99	54.593	ENSRNOG00000039949	Rad54b	99	54.593	Rattus_norvegicus
ENSPFOG00000023411	rad54b	99	54.739	ENSRBIG00000020419	-	99	54.739	Rhinopithecus_bieti
ENSPFOG00000023411	rad54b	99	54.739	ENSRROG00000039897	-	99	54.739	Rhinopithecus_roxellana
ENSPFOG00000023411	rad54b	79	37.576	YBR073W	RDH54	81	37.091	Saccharomyces_cerevisiae
ENSPFOG00000023411	rad54b	99	54.497	ENSSBOG00000028501	-	99	54.497	Saimiri_boliviensis_boliviensis
ENSPFOG00000023411	rad54b	99	54.995	ENSSHAG00000017038	-	99	54.995	Sarcophilus_harrisii
ENSPFOG00000023411	rad54b	61	72.056	ENSSFOG00015008483	rad54b	89	72.056	Scleropages_formosus
ENSPFOG00000023411	rad54b	99	79.427	ENSSMAG00000018659	rad54b	99	83.270	Scophthalmus_maximus
ENSPFOG00000023411	rad54b	97	81.352	ENSSDUG00000001122	rad54b	96	81.570	Seriola_dumerili
ENSPFOG00000023411	rad54b	99	82.011	ENSSLDG00000013787	rad54b	99	82.222	Seriola_lalandi_dorsalis
ENSPFOG00000023411	rad54b	99	57.037	ENSSPUG00000016497	-	100	57.037	Sphenodon_punctatus
ENSPFOG00000023411	rad54b	99	79.828	ENSSPAG00000012800	rad54b	99	79.828	Stegastes_partitus
ENSPFOG00000023411	rad54b	99	55.213	ENSSSCG00000006101	-	98	60.951	Sus_scrofa
ENSPFOG00000023411	rad54b	99	57.595	ENSTGUG00000011880	-	99	57.595	Taeniopygia_guttata
ENSPFOG00000023411	rad54b	99	75.928	ENSTRUG00000010015	rad54b	99	76.034	Takifugu_rubripes
ENSPFOG00000023411	rad54b	99	52.587	ENSTTRG00000006312	-	99	52.587	Tursiops_truncatus
ENSPFOG00000023411	rad54b	99	55.272	ENSUMAG00000016401	-	99	55.272	Ursus_maritimus
ENSPFOG00000023411	rad54b	99	55.111	ENSVPAG00000003157	-	99	55.111	Vicugna_pacos
ENSPFOG00000023411	rad54b	99	49.097	ENSXETG00000025924	rad54b	98	54.261	Xenopus_tropicalis
ENSPFOG00000023411	rad54b	91	94.505	ENSXMAG00000013141	rad54b	99	94.505	Xiphophorus_maculatus