EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000023551 (Gene tree)
Gene ID: -
Gene Symbol: rbm12
Alias: -
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Minus strand
Length: 2697 bases
Position: chrKI519628.1:3907430-3910126
Accession: ZDB-GENE-081022-16
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000029501	RRM_1	PF00076.22	2.7e-34	1	4
ENSPFOP00000029501	RRM_1	PF00076.22	2.7e-34	2	4
ENSPFOP00000029501	RRM_1	PF00076.22	2.7e-34	3	4
ENSPFOP00000029501	RRM_1	PF00076.22	2.7e-34	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000023680	-	2142	-	ENSPFOP00000029501	713 (aa)	-	A0A096MDL0

Gene Model

Click here to download ENSPFOG00000023551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000023551's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000023551	rbm12	83	67.033	ENSPFOG00000020937	rbm12b	93	67.033
ENSPFOG00000023551	rbm12	70	36.232	ENSPFOG00000004097	hnrnph1	80	36.232

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000023551	rbm12	98	78.873	ENSG00000244462	RBM12	82	82.609	Homo_sapiens
ENSPFOG00000023551	rbm12	90	78.873	ENSAMEG00000019189	RBM12	60	78.571	Ailuropoda_melanoleuca
ENSPFOG00000023551	rbm12	97	76.963	ENSACIG00000011053	rbm12	91	75.000	Amphilophus_citrinellus
ENSPFOG00000023551	rbm12	86	77.465	ENSACAG00000006330	RBM12	64	82.609	Anolis_carolinensis
ENSPFOG00000023551	rbm12	93	78.873	ENSANAG00000032596	RBM12	62	78.571	Aotus_nancymaae
ENSPFOG00000023551	rbm12	97	78.873	ENSBTAG00000044015	RBM12	58	78.571	Bos_taurus
ENSPFOG00000023551	rbm12	79	80.000	ENSCAFG00000008256	RBM12	62	78.571	Canis_familiaris
ENSPFOG00000023551	rbm12	80	78.873	ENSCAFG00020005650	RBM12	60	78.571	Canis_lupus_dingo
ENSPFOG00000023551	rbm12	92	78.873	ENSCHIG00000024592	RBM12	60	78.571	Capra_hircus
ENSPFOG00000023551	rbm12	85	78.873	ENSTSYG00000030563	RBM12	60	78.571	Carlito_syrichta
ENSPFOG00000023551	rbm12	83	66.667	ENSCAPG00000006176	RBM12	52	79.365	Cavia_aperea
ENSPFOG00000023551	rbm12	93	78.873	ENSCPOG00000035170	RBM12	56	79.365	Cavia_porcellus
ENSPFOG00000023551	rbm12	80	78.873	ENSCCAG00000035899	-	62	81.739	Cebus_capucinus
ENSPFOG00000023551	rbm12	84	78.873	ENSCCAG00000036056	-	57	63.366	Cebus_capucinus
ENSPFOG00000023551	rbm12	93	78.873	ENSCATG00000030934	RBM12	58	78.571	Cercocebus_atys
ENSPFOG00000023551	rbm12	98	78.873	ENSCLAG00000017230	RBM12	60	79.365	Chinchilla_lanigera
ENSPFOG00000023551	rbm12	98	78.873	ENSCANG00000030552	RBM12	66	64.356	Colobus_angolensis_palliatus
ENSPFOG00000023551	rbm12	98	67.778	ENSCGRG00001021144	Rbm12	53	82.609	Cricetulus_griseus_chok1gshd
ENSPFOG00000023551	rbm12	98	67.778	ENSCGRG00000012719	Rbm12	53	82.609	Cricetulus_griseus_crigri
ENSPFOG00000023551	rbm12	98	77.465	ENSDORG00000000606	-	54	76.984	Dipodomys_ordii
ENSPFOG00000023551	rbm12	98	78.873	ENSDORG00000028509	-	59	78.571	Dipodomys_ordii
ENSPFOG00000023551	rbm12	99	63.571	ENSEBUG00000016806	rbm12	99	63.571	Eptatretus_burgeri
ENSPFOG00000023551	rbm12	93	78.873	ENSECAG00000021997	RBM12	60	78.571	Equus_caballus
ENSPFOG00000023551	rbm12	89	67.391	ENSFALG00000012516	RBM12	87	56.338	Ficedula_albicollis
ENSPFOG00000023551	rbm12	98	78.873	ENSFDAG00000014663	RBM12	60	79.365	Fukomys_damarensis
ENSPFOG00000023551	rbm12	80	78.873	ENSGALG00000030253	RBM12	63	78.571	Gallus_gallus
ENSPFOG00000023551	rbm12	93	78.873	ENSGGOG00000028500	RBM12	58	82.609	Gorilla_gorilla
ENSPFOG00000023551	rbm12	98	78.873	ENSHGLG00000013208	RBM12	60	79.365	Heterocephalus_glaber_female
ENSPFOG00000023551	rbm12	80	78.873	ENSHGLG00100019158	RBM12	59	79.365	Heterocephalus_glaber_male
ENSPFOG00000023551	rbm12	88	65.507	ENSIPUG00000014491	rbm12	83	64.242	Ictalurus_punctatus
ENSPFOG00000023551	rbm12	98	67.391	ENSSTOG00000019739	RBM12	58	78.571	Ictidomys_tridecemlineatus
ENSPFOG00000023551	rbm12	77	70.423	ENSJJAG00000009879	-	79	58.416	Jaculus_jaculus
ENSPFOG00000023551	rbm12	91	64.124	ENSLOCG00000018363	rbm12	85	65.946	Lepisosteus_oculatus
ENSPFOG00000023551	rbm12	85	78.873	ENSLAFG00000010341	RBM12	79	64.356	Loxodonta_africana
ENSPFOG00000023551	rbm12	93	78.873	ENSMFAG00000032583	RBM12	58	78.571	Macaca_fascicularis
ENSPFOG00000023551	rbm12	93	78.873	ENSMMUG00000020960	CPNE1	60	78.571	Macaca_mulatta
ENSPFOG00000023551	rbm12	93	78.873	ENSMNEG00000045365	RBM12	58	78.571	Macaca_nemestrina
ENSPFOG00000023551	rbm12	93	78.873	ENSMLEG00000032492	RBM12	58	78.571	Mandrillus_leucophaeus
ENSPFOG00000023551	rbm12	77	63.977	ENSMAMG00000001497	rbm12	89	61.021	Mastacembelus_armatus
ENSPFOG00000023551	rbm12	83	67.391	ENSMGAG00000001502	RBM12	65	78.571	Meleagris_gallopavo
ENSPFOG00000023551	rbm12	98	78.873	ENSMAUG00000012800	Rbm12	55	82.609	Mesocricetus_auratus
ENSPFOG00000023551	rbm12	80	78.873	ENSMICG00000032761	-	60	78.571	Microcebus_murinus
ENSPFOG00000023551	rbm12	85	76.056	ENSMICG00000029540	-	79	62.376	Microcebus_murinus
ENSPFOG00000023551	rbm12	96	67.391	ENSMOCG00000012950	Rbm12	55	82.609	Microtus_ochrogaster
ENSPFOG00000023551	rbm12	97	81.215	ENSMMOG00000013495	rbm12	90	75.122	Mola_mola
ENSPFOG00000023551	rbm12	83	67.391	ENSMODG00000001591	RBM12	61	78.571	Monodelphis_domestica
ENSPFOG00000023551	rbm12	70	78.704	ENSMALG00000022679	rbm12	99	80.392	Monopterus_albus
ENSPFOG00000023551	rbm12	92	78.873	MGP_CAROLIEiJ_G0024551	Rbm12	55	82.609	Mus_caroli
ENSPFOG00000023551	rbm12	88	78.873	ENSMUSG00000089824	Rbm12	55	82.609	Mus_musculus
ENSPFOG00000023551	rbm12	89	78.873	MGP_PahariEiJ_G0025996	Rbm12	55	82.609	Mus_pahari
ENSPFOG00000023551	rbm12	92	78.873	MGP_SPRETEiJ_G0025473	Rbm12	55	82.609	Mus_spretus
ENSPFOG00000023551	rbm12	85	78.873	ENSMPUG00000017789	-	60	78.571	Mustela_putorius_furo
ENSPFOG00000023551	rbm12	98	78.873	ENSMLUG00000011217	RBM12	66	64.356	Myotis_lucifugus
ENSPFOG00000023551	rbm12	98	78.873	ENSNGAG00000015846	Rbm12	55	82.609	Nannospalax_galili
ENSPFOG00000023551	rbm12	93	78.873	ENSNLEG00000010268	RBM12	58	82.609	Nomascus_leucogenys
ENSPFOG00000023551	rbm12	82	67.778	ENSMEUG00000007621	RBM12	84	64.356	Notamacropus_eugenii
ENSPFOG00000023551	rbm12	96	78.873	ENSOPRG00000005687	RBM12	67	64.356	Ochotona_princeps
ENSPFOG00000023551	rbm12	98	78.873	ENSODEG00000013870	RBM12	57	79.365	Octodon_degus
ENSPFOG00000023551	rbm12	93	78.873	ENSPPAG00000040719	RBM12	58	82.609	Pan_paniscus
ENSPFOG00000023551	rbm12	93	78.873	ENSPTRG00000040708	-	58	82.609	Pan_troglodytes
ENSPFOG00000023551	rbm12	93	78.873	ENSPTRG00000013446	RBM12	58	82.609	Pan_troglodytes
ENSPFOG00000023551	rbm12	93	78.873	ENSPANG00000020003	CPNE1	58	78.571	Papio_anubis
ENSPFOG00000023551	rbm12	99	57.143	ENSPSIG00000007369	RBM12	88	57.073	Pelodiscus_sinensis
ENSPFOG00000023551	rbm12	75	62.791	ENSPMGG00000018816	rbm12	96	62.791	Periophthalmus_magnuspinnatus
ENSPFOG00000023551	rbm12	93	78.873	ENSPEMG00000017769	Rbm12	55	82.609	Peromyscus_maniculatus_bairdii
ENSPFOG00000023551	rbm12	98	78.873	ENSPPYG00000010960	RBM12	59	78.571	Pongo_abelii
ENSPFOG00000023551	rbm12	84	64.356	ENSPCAG00000008653	RBM12	63	64.356	Procavia_capensis
ENSPFOG00000023551	rbm12	93	78.873	ENSPCOG00000023724	RBM12	63	78.571	Propithecus_coquereli
ENSPFOG00000023551	rbm12	98	78.873	ENSPVAG00000014937	RBM12	67	64.356	Pteropus_vampyrus
ENSPFOG00000023551	rbm12	96	78.873	ENSRNOG00000019723	Rbm12	72	64.356	Rattus_norvegicus
ENSPFOG00000023551	rbm12	96	78.873	ENSRNOG00000049913	LOC100910990	72	64.356	Rattus_norvegicus
ENSPFOG00000023551	rbm12	93	78.873	ENSRBIG00000042965	RBM12	58	78.571	Rhinopithecus_bieti
ENSPFOG00000023551	rbm12	93	78.873	ENSRROG00000037485	RBM12	58	78.571	Rhinopithecus_roxellana
ENSPFOG00000023551	rbm12	90	78.873	ENSSBOG00000027633	RBM12	62	78.571	Saimiri_boliviensis_boliviensis
ENSPFOG00000023551	rbm12	83	67.391	ENSSHAG00000018585	RBM12	63	78.571	Sarcophilus_harrisii
ENSPFOG00000023551	rbm12	98	78.873	ENSSSCG00000036156	RBM12	59	78.571	Sus_scrofa
ENSPFOG00000023551	rbm12	86	78.873	ENSTGUG00000003002	RBM12	71	78.571	Taeniopygia_guttata
ENSPFOG00000023551	rbm12	98	78.873	ENSTTRG00000017035	RBM12	60	78.571	Tursiops_truncatus
ENSPFOG00000023551	rbm12	85	78.873	ENSUAMG00000010430	RBM12	60	78.571	Ursus_americanus
ENSPFOG00000023551	rbm12	89	63.473	ENSXETG00000033541	RBM12	67	74.684	Xenopus_tropicalis
ENSPFOG00000023551	rbm12	97	85.263	ENSXCOG00000014073	rbm12	88	85.263	Xiphophorus_couchianus