EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPFOG00000023705 (Gene tree)
Gene ID: 103137576
Gene Symbol: si:ch211-212k18.5
Alias: -
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 6699 bases
Position: chrKI519651.1:2817213-2823911
Accession: 103137576
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000026520	zf-C2H2	PF00096.26	4.6e-18	1	2
ENSPFOP00000026520	zf-C2H2	PF00096.26	4.6e-18	2	2
ENSPFOP00000021675	zf-C2H2	PF00096.26	5e-18	1	2
ENSPFOP00000021675	zf-C2H2	PF00096.26	5e-18	2	2
ENSPFOP00000031062	zf-C2H2	PF00096.26	4.3e-16	1	1
ENSPFOP00000026520	zf-met	PF12874.7	1e-10	1	2
ENSPFOP00000026520	zf-met	PF12874.7	1e-10	2	2
ENSPFOP00000021675	zf-met	PF12874.7	1.2e-10	1	2
ENSPFOP00000021675	zf-met	PF12874.7	1.2e-10	2	2
ENSPFOP00000031062	zf-met	PF12874.7	1.9e-09	1	2
ENSPFOP00000031062	zf-met	PF12874.7	1.9e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000032021	-	5149	-	ENSPFOP00000031062	1138 (aa)	-	A0A096MI21
ENSPFOT00000029744	-	5054	XM_007551380	ENSPFOP00000021675	1209 (aa)	XP_007551442	A0A096LR84
ENSPFOT00000022510	-	4982	XM_016671074	ENSPFOP00000026520	1185 (aa)	XP_016526560	A0A096M529

Gene Model

Click here to download ENSPFOG00000023705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000023705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPFOG00000023705	si:ch211-212k18.5	57	47.534	ENSPFOG00000016504	sall2	60	47.559

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000023705	si:ch211-212k18.5	99	75.716	ENSAPOG00000013387	si:ch211-212k18.5	99	74.754	Acanthochromis_polyacanthus
ENSPFOG00000023705	si:ch211-212k18.5	72	64.865	ENSAPOG00000015347	sall2	53	47.036	Acanthochromis_polyacanthus
ENSPFOG00000023705	si:ch211-212k18.5	85	79.691	ENSACIG00000019922	si:ch211-212k18.5	99	81.218	Amphilophus_citrinellus
ENSPFOG00000023705	si:ch211-212k18.5	72	64.865	ENSAOCG00000016559	sall2	53	46.850	Amphiprion_ocellaris
ENSPFOG00000023705	si:ch211-212k18.5	99	72.837	ENSAOCG00000010737	si:ch211-212k18.5	99	72.608	Amphiprion_ocellaris
ENSPFOG00000023705	si:ch211-212k18.5	58	45.902	ENSAPEG00000020215	sall2	72	73.333	Amphiprion_percula
ENSPFOG00000023705	si:ch211-212k18.5	99	73.097	ENSAPEG00000006751	si:ch211-212k18.5	99	72.854	Amphiprion_percula
ENSPFOG00000023705	si:ch211-212k18.5	51	71.111	ENSATEG00000007303	sall2	52	71.111	Anabas_testudineus
ENSPFOG00000023705	si:ch211-212k18.5	79	81.047	ENSATEG00000001254	si:ch211-212k18.5	99	81.395	Anabas_testudineus
ENSPFOG00000023705	si:ch211-212k18.5	99	72.838	ENSACLG00000009709	si:ch211-212k18.5	99	72.848	Astatotilapia_calliptera
ENSPFOG00000023705	si:ch211-212k18.5	58	47.240	ENSACLG00000019867	sall2	50	75.556	Astatotilapia_calliptera
ENSPFOG00000023705	si:ch211-212k18.5	57	49.857	ENSAMXG00000020956	sall2	58	49.206	Astyanax_mexicanus
ENSPFOG00000023705	si:ch211-212k18.5	100	55.427	ENSAMXG00000010979	si:ch211-212k18.5	99	55.198	Astyanax_mexicanus
ENSPFOG00000023705	si:ch211-212k18.5	99	69.561	ENSCSEG00000004426	si:ch211-212k18.5	99	68.160	Cynoglossus_semilaevis
ENSPFOG00000023705	si:ch211-212k18.5	84	39.037	ENSCSEG00000021148	sall2	69	39.485	Cynoglossus_semilaevis
ENSPFOG00000023705	si:ch211-212k18.5	65	48.289	ENSCVAG00000006032	sall2	51	65.000	Cyprinodon_variegatus
ENSPFOG00000023705	si:ch211-212k18.5	99	87.434	ENSCVAG00000007475	si:ch211-212k18.5	99	87.427	Cyprinodon_variegatus
ENSPFOG00000023705	si:ch211-212k18.5	99	55.488	ENSDARG00000103316	si:ch211-212k18.5	95	54.301	Danio_rerio
ENSPFOG00000023705	si:ch211-212k18.5	74	48.081	ENSELUG00000004389	sall2	64	53.556	Esox_lucius
ENSPFOG00000023705	si:ch211-212k18.5	100	57.094	ENSELUG00000024534	si:ch211-212k18.5	99	55.859	Esox_lucius
ENSPFOG00000023705	si:ch211-212k18.5	99	87.786	ENSFHEG00000017264	si:ch211-212k18.5	99	87.760	Fundulus_heteroclitus
ENSPFOG00000023705	si:ch211-212k18.5	58	46.982	ENSFHEG00000017550	sall2	59	46.225	Fundulus_heteroclitus
ENSPFOG00000023705	si:ch211-212k18.5	57	47.867	ENSGAFG00000015194	sall2	58	47.011	Gambusia_affinis
ENSPFOG00000023705	si:ch211-212k18.5	100	95.527	ENSGAFG00000003746	si:ch211-212k18.5	99	95.578	Gambusia_affinis
ENSPFOG00000023705	si:ch211-212k18.5	100	72.949	ENSHBUG00000019672	si:ch211-212k18.5	99	73.409	Haplochromis_burtoni
ENSPFOG00000023705	si:ch211-212k18.5	99	59.635	ENSHCOG00000002842	si:ch211-212k18.5	99	57.573	Hippocampus_comes
ENSPFOG00000023705	si:ch211-212k18.5	100	53.659	ENSIPUG00000002559	sall2	99	51.629	Ictalurus_punctatus
ENSPFOG00000023705	si:ch211-212k18.5	57	47.878	ENSKMAG00000020172	sall2	58	45.778	Kryptolebias_marmoratus
ENSPFOG00000023705	si:ch211-212k18.5	99	76.277	ENSKMAG00000019657	si:ch211-212k18.5	99	75.185	Kryptolebias_marmoratus
ENSPFOG00000023705	si:ch211-212k18.5	99	71.304	ENSLBEG00000020887	si:ch211-212k18.5	99	69.389	Labrus_bergylta
ENSPFOG00000023705	si:ch211-212k18.5	75	84.795	ENSMAMG00000015887	si:ch211-212k18.5	99	84.795	Mastacembelus_armatus
ENSPFOG00000023705	si:ch211-212k18.5	99	72.838	ENSMZEG00005021214	si:ch211-212k18.5	99	72.930	Maylandia_zebra
ENSPFOG00000023705	si:ch211-212k18.5	94	80.765	ENSMMOG00000012726	si:ch211-212k18.5	99	79.865	Mola_mola
ENSPFOG00000023705	si:ch211-212k18.5	98	74.151	ENSMALG00000000979	si:ch211-212k18.5	97	73.716	Monopterus_albus
ENSPFOG00000023705	si:ch211-212k18.5	100	69.573	ENSNBRG00000023948	si:ch211-212k18.5	99	67.225	Neolamprologus_brichardi
ENSPFOG00000023705	si:ch211-212k18.5	100	40.399	ENSNBRG00000017645	sall2	99	39.274	Neolamprologus_brichardi
ENSPFOG00000023705	si:ch211-212k18.5	58	45.144	ENSORLG00000026871	sall2	59	45.418	Oryzias_latipes
ENSPFOG00000023705	si:ch211-212k18.5	99	70.609	ENSORLG00000030429	si:ch211-212k18.5	99	68.977	Oryzias_latipes
ENSPFOG00000023705	si:ch211-212k18.5	99	70.670	ENSORLG00020008145	si:ch211-212k18.5	99	69.428	Oryzias_latipes_hni
ENSPFOG00000023705	si:ch211-212k18.5	58	45.144	ENSORLG00020007873	sall2	59	45.286	Oryzias_latipes_hni
ENSPFOG00000023705	si:ch211-212k18.5	99	69.539	ENSORLG00015004982	si:ch211-212k18.5	99	69.180	Oryzias_latipes_hsok
ENSPFOG00000023705	si:ch211-212k18.5	58	44.751	ENSORLG00015002422	sall2	59	45.020	Oryzias_latipes_hsok
ENSPFOG00000023705	si:ch211-212k18.5	60	54.348	ENSOMEG00000012904	sall2	65	54.348	Oryzias_melastigma
ENSPFOG00000023705	si:ch211-212k18.5	99	69.330	ENSOMEG00000013949	si:ch211-212k18.5	99	69.572	Oryzias_melastigma
ENSPFOG00000023705	si:ch211-212k18.5	76	51.606	ENSPKIG00000009207	sall2	84	51.046	Paramormyrops_kingsleyae
ENSPFOG00000023705	si:ch211-212k18.5	100	65.907	ENSPMGG00000018714	si:ch211-212k18.5	99	65.429	Periophthalmus_magnuspinnatus
ENSPFOG00000023705	si:ch211-212k18.5	57	46.676	ENSPLAG00000018320	sall2	58	47.019	Poecilia_latipinna
ENSPFOG00000023705	si:ch211-212k18.5	100	99.256	ENSPLAG00000002577	si:ch211-212k18.5	100	99.256	Poecilia_latipinna
ENSPFOG00000023705	si:ch211-212k18.5	100	99.669	ENSPMEG00000016395	si:ch211-212k18.5	100	99.669	Poecilia_mexicana
ENSPFOG00000023705	si:ch211-212k18.5	56	66.667	ENSPMEG00000006335	sall2	58	46.947	Poecilia_mexicana
ENSPFOG00000023705	si:ch211-212k18.5	100	96.942	ENSPREG00000005292	si:ch211-212k18.5	100	96.942	Poecilia_reticulata
ENSPFOG00000023705	si:ch211-212k18.5	57	66.667	ENSPREG00000021908	sall2	51	46.667	Poecilia_reticulata
ENSPFOG00000023705	si:ch211-212k18.5	100	70.070	ENSPNYG00000021576	si:ch211-212k18.5	99	69.205	Pundamilia_nyererei
ENSPFOG00000023705	si:ch211-212k18.5	99	56.207	ENSPNAG00000006123	si:ch211-212k18.5	94	56.895	Pygocentrus_nattereri
ENSPFOG00000023705	si:ch211-212k18.5	99	73.050	ENSSMAG00000006241	si:ch211-212k18.5	99	71.261	Scophthalmus_maximus
ENSPFOG00000023705	si:ch211-212k18.5	99	76.511	ENSSDUG00000006164	si:ch211-212k18.5	99	75.347	Seriola_dumerili
ENSPFOG00000023705	si:ch211-212k18.5	99	78.238	ENSSLDG00000003393	si:ch211-212k18.5	99	76.980	Seriola_lalandi_dorsalis
ENSPFOG00000023705	si:ch211-212k18.5	100	74.026	ENSSPAG00000013435	si:ch211-212k18.5	97	74.113	Stegastes_partitus
ENSPFOG00000023705	si:ch211-212k18.5	100	69.919	ENSTRUG00000025082	si:ch211-212k18.5	98	70.600	Takifugu_rubripes
ENSPFOG00000023705	si:ch211-212k18.5	99	91.923	ENSXCOG00000000762	si:ch211-212k18.5	99	92.429	Xiphophorus_couchianus
ENSPFOG00000023705	si:ch211-212k18.5	100	96.119	ENSXMAG00000001461	si:ch211-212k18.5	100	96.119	Xiphophorus_maculatus