EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPFOG00000024205 (Gene tree)
Gene ID: 103130221
Gene Symbol: ncl
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Poecilia_formosa
Status: putative
Strand: Plus strand
Length: 7917 bases
Position: chrKI519620.1:2218271-2226187
Accession: 103130221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPFOP00000025564	RRM_1	PF00076.22	9.8e-62	1	4
ENSPFOP00000025564	RRM_1	PF00076.22	9.8e-62	2	4
ENSPFOP00000025564	RRM_1	PF00076.22	9.8e-62	3	4
ENSPFOP00000025564	RRM_1	PF00076.22	9.8e-62	4	4
ENSPFOP00000030602	RRM_1	PF00076.22	1e-61	1	4
ENSPFOP00000030602	RRM_1	PF00076.22	1e-61	2	4
ENSPFOP00000030602	RRM_1	PF00076.22	1e-61	3	4
ENSPFOP00000030602	RRM_1	PF00076.22	1e-61	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPFOT00000025915	-	3866	-	ENSPFOP00000025564	736 (aa)	XP_007541618	A0A096M2C3
ENSPFOT00000028316	-	3881	-	ENSPFOP00000030602	741 (aa)	-	A0A096MGR1

Gene Model

Click here to download ENSPFOG00000024205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPFOG00000024205's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPFOG00000024205	ncl	57	82.143	ENSAPOG00000023888	ncl	65	80.435	Acanthochromis_polyacanthus
ENSPFOG00000024205	ncl	55	41.995	ENSAPOG00000014534	-	67	41.969	Acanthochromis_polyacanthus
ENSPFOG00000024205	ncl	52	41.414	ENSAOCG00000014792	-	61	41.085	Amphiprion_ocellaris
ENSPFOG00000024205	ncl	52	41.667	ENSAPEG00000013612	-	60	41.344	Amphiprion_percula
ENSPFOG00000024205	ncl	68	72.655	ENSATEG00000013343	ncl	66	81.818	Anabas_testudineus
ENSPFOG00000024205	ncl	65	41.420	ENSATEG00000019862	-	80	45.361	Anabas_testudineus
ENSPFOG00000024205	ncl	51	59.424	ENSAPLG00000012897	-	63	59.162	Anas_platyrhynchos
ENSPFOG00000024205	ncl	50	63.517	ENSACAG00000001006	-	52	61.680	Anolis_carolinensis
ENSPFOG00000024205	ncl	55	66.829	ENSAMXG00000001647	ncl	80	71.572	Astyanax_mexicanus
ENSPFOG00000024205	ncl	51	62.368	ENSCPBG00000016444	-	56	62.005	Chrysemys_picta_bellii
ENSPFOG00000024205	ncl	64	78.701	ENSCSEG00000015089	ncl	70	75.267	Cynoglossus_semilaevis
ENSPFOG00000024205	ncl	73	86.649	ENSCVAG00000012600	ncl	77	84.764	Cyprinodon_variegatus
ENSPFOG00000024205	ncl	57	73.522	ENSDARG00000002710	ncl	79	74.757	Danio_rerio
ENSPFOG00000024205	ncl	58	45.940	ENSDNOG00000040257	-	72	44.804	Dasypus_novemcinctus
ENSPFOG00000024205	ncl	58	46.604	ENSELUG00000022826	-	80	48.257	Esox_lucius
ENSPFOG00000024205	ncl	57	73.412	ENSELUG00000006033	ncl	61	71.951	Esox_lucius
ENSPFOG00000024205	ncl	51	60.156	ENSFALG00000007592	-	55	59.896	Ficedula_albicollis
ENSPFOG00000024205	ncl	70	67.548	ENSGMOG00000001341	ncl	72	65.517	Gadus_morhua
ENSPFOG00000024205	ncl	71	97.101	ENSGAFG00000015375	ncl	62	93.464	Gambusia_affinis
ENSPFOG00000024205	ncl	90	67.005	ENSGACG00000008970	ncl	72	73.043	Gasterosteus_aculeatus
ENSPFOG00000024205	ncl	51	63.158	ENSGAGG00000013330	-	56	62.797	Gopherus_agassizii
ENSPFOG00000024205	ncl	57	77.488	ENSHBUG00000006869	ncl	66	75.699	Haplochromis_burtoni
ENSPFOG00000024205	ncl	57	83.095	ENSKMAG00000008111	ncl	65	78.867	Kryptolebias_marmoratus
ENSPFOG00000024205	ncl	62	40.928	ENSLBEG00000007915	-	66	43.188	Labrus_bergylta
ENSPFOG00000024205	ncl	58	81.925	ENSLBEG00000019073	ncl	68	78.280	Labrus_bergylta
ENSPFOG00000024205	ncl	78	63.466	ENSLACG00000009328	ncl	53	64.021	Latimeria_chalumnae
ENSPFOG00000024205	ncl	54	51.861	ENSLACG00000022167	-	76	54.167	Latimeria_chalumnae
ENSPFOG00000024205	ncl	86	81.304	ENSMAMG00000002086	ncl	56	81.385	Mastacembelus_armatus
ENSPFOG00000024205	ncl	56	39.954	ENSMAMG00000003479	-	69	40.625	Mastacembelus_armatus
ENSPFOG00000024205	ncl	57	77.672	ENSMZEG00005017438	ncl	66	75.484	Maylandia_zebra
ENSPFOG00000024205	ncl	50	59.511	ENSMGAG00000008147	-	85	59.239	Meleagris_gallopavo
ENSPFOG00000024205	ncl	51	56.298	ENSMODG00000002470	-	54	55.128	Monodelphis_domestica
ENSPFOG00000024205	ncl	87	67.708	ENSMALG00000014827	ncl	67	78.621	Monopterus_albus
ENSPFOG00000024205	ncl	63	58.073	ENSMEUG00000012335	-	55	57.180	Notamacropus_eugenii
ENSPFOG00000024205	ncl	51	37.968	ENSONIG00000010631	-	97	38.400	Oreochromis_niloticus
ENSPFOG00000024205	ncl	50	78.378	ENSONIG00000012508	ncl	65	76.293	Oreochromis_niloticus
ENSPFOG00000024205	ncl	59	58.186	ENSOANG00000008732	-	61	60.104	Ornithorhynchus_anatinus
ENSPFOG00000024205	ncl	56	37.529	ENSORLG00000004645	-	86	36.341	Oryzias_latipes
ENSPFOG00000024205	ncl	50	83.106	ENSORLG00000007055	ncl	64	79.274	Oryzias_latipes
ENSPFOG00000024205	ncl	58	81.221	ENSORLG00020017943	ncl	64	79.274	Oryzias_latipes_hni
ENSPFOG00000024205	ncl	53	38.142	ENSORLG00020003497	-	74	36.815	Oryzias_latipes_hni
ENSPFOG00000024205	ncl	53	38.308	ENSORLG00015006613	-	77	37.076	Oryzias_latipes_hsok
ENSPFOG00000024205	ncl	57	77.435	ENSORLG00015013815	ncl	86	83.654	Oryzias_latipes_hsok
ENSPFOG00000024205	ncl	52	37.562	ENSOMEG00000015864	-	81	37.173	Oryzias_melastigma
ENSPFOG00000024205	ncl	52	82.415	ENSOMEG00000020786	ncl	63	78.769	Oryzias_melastigma
ENSPFOG00000024205	ncl	64	73.759	ENSPKIG00000002604	ncl	50	74.599	Paramormyrops_kingsleyae
ENSPFOG00000024205	ncl	57	75.772	ENSPMGG00000004709	ncl	99	71.391	Periophthalmus_magnuspinnatus
ENSPFOG00000024205	ncl	51	57.584	ENSPCIG00000003293	-	54	56.667	Phascolarctos_cinereus
ENSPFOG00000024205	ncl	100	98.370	ENSPLAG00000024026	ncl	100	98.370	Poecilia_latipinna
ENSPFOG00000024205	ncl	100	99.457	ENSPMEG00000006000	ncl	100	99.457	Poecilia_mexicana
ENSPFOG00000024205	ncl	64	77.619	ENSPNYG00000020494	ncl	66	75.810	Pundamilia_nyererei
ENSPFOG00000024205	ncl	53	51.698	ENSSHAG00000007489	-	50	50.758	Sarcophilus_harrisii
ENSPFOG00000024205	ncl	60	71.300	ENSSFOG00015008583	ncl	68	66.737	Scleropages_formosus
ENSPFOG00000024205	ncl	51	43.417	ENSSFOG00015013153	-	76	44.551	Scleropages_formosus
ENSPFOG00000024205	ncl	54	43.614	ENSSMAG00000007582	-	61	44.357	Scophthalmus_maximus
ENSPFOG00000024205	ncl	60	39.216	ENSSDUG00000010922	-	70	41.558	Seriola_dumerili
ENSPFOG00000024205	ncl	52	83.246	ENSSDUG00000006128	ncl	87	83.202	Seriola_dumerili
ENSPFOG00000024205	ncl	58	82.558	ENSSLDG00000002012	ncl	61	73.002	Seriola_lalandi_dorsalis
ENSPFOG00000024205	ncl	53	42.199	ENSSLDG00000015784	-	65	41.775	Seriola_lalandi_dorsalis
ENSPFOG00000024205	ncl	62	54.800	ENSSPUG00000008244	-	61	57.683	Sphenodon_punctatus
ENSPFOG00000024205	ncl	52	43.655	ENSSPAG00000001859	-	61	42.782	Stegastes_partitus
ENSPFOG00000024205	ncl	50	60.471	ENSTGUG00000009782	-	60	59.686	Taeniopygia_guttata
ENSPFOG00000024205	ncl	51	76.579	ENSTNIG00000012186	ncl	89	71.706	Tetraodon_nigroviridis
ENSPFOG00000024205	ncl	50	63.660	ENSXETG00000009517	ncl	66	63.130	Xenopus_tropicalis
ENSPFOG00000024205	ncl	54	39.753	ENSXCOG00000007369	-	89	40.789	Xiphophorus_couchianus
ENSPFOG00000024205	ncl	58	58.667	ENSXCOG00000003524	ncl	99	75.870	Xiphophorus_couchianus
ENSPFOG00000024205	ncl	64	93.235	ENSXMAG00000005914	ncl	65	93.671	Xiphophorus_maculatus