EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000000088 (Gene tree)
Gene ID: 111842520
Gene Symbol: nsrp1
Alias: -
Full Name: nuclear speckle splicing regulatory protein 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 5432 bases
Position: chrPGUA01000122.1:1523330-1528761
Accession: 111842520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000012215	DUF2040	PF09745.9	2.6e-36	1	1
ENSPKIP00000012222	DUF2040	PF09745.9	3.1e-36	1	1
ENSPKIP00000012228	DUF2040	PF09745.9	2.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000036617	-	2535	-	ENSPKIP00000012228	416 (aa)	-	-
ENSPKIT00000036611	-	2664	-	ENSPKIP00000012222	459 (aa)	XP_023664977	UPI000CD60B5C
ENSPKIT00000036602	-	2304	-	ENSPKIP00000012215	423 (aa)	XP_023664983	UPI000CD5D568

Gene Model

Click here to download ENSPKIG00000000088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000000088's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000000088	nsrp1	100	41.429	ENSG00000126653	NSRP1	97	65.359	Homo_sapiens
ENSPKIG00000000088	nsrp1	57	65.091	ENSAPOG00000019041	nsrp1	56	65.818	Acanthochromis_polyacanthus
ENSPKIG00000000088	nsrp1	62	62.199	ENSACIG00000014008	nsrp1	56	66.412	Amphilophus_citrinellus
ENSPKIG00000000088	nsrp1	74	79.394	ENSAOCG00000011727	nsrp1	56	76.531	Amphiprion_ocellaris
ENSPKIG00000000088	nsrp1	56	58.182	ENSAPEG00000018767	nsrp1	50	64.091	Amphiprion_percula
ENSPKIG00000000088	nsrp1	100	51.266	ENSATEG00000006815	nsrp1	58	62.545	Anabas_testudineus
ENSPKIG00000000088	nsrp1	99	39.692	ENSAPLG00000011228	NSRP1	61	73.684	Anas_platyrhynchos
ENSPKIG00000000088	nsrp1	57	67.910	ENSACLG00000005604	nsrp1	57	67.910	Astatotilapia_calliptera
ENSPKIG00000000088	nsrp1	100	53.249	ENSAMXG00000038882	nsrp1	58	66.288	Astyanax_mexicanus
ENSPKIG00000000088	nsrp1	100	44.465	ENSCGRG00001017048	Nsrp1	53	75.676	Cricetulus_griseus_chok1gshd
ENSPKIG00000000088	nsrp1	100	44.465	ENSCGRG00000010270	Nsrp1	53	75.676	Cricetulus_griseus_crigri
ENSPKIG00000000088	nsrp1	100	46.080	ENSCSEG00000018083	nsrp1	61	72.500	Cynoglossus_semilaevis
ENSPKIG00000000088	nsrp1	99	52.795	ENSCVAG00000021345	nsrp1	57	61.481	Cyprinodon_variegatus
ENSPKIG00000000088	nsrp1	100	50.287	ENSDARG00000015221	nsrp1	59	71.053	Danio_rerio
ENSPKIG00000000088	nsrp1	70	61.765	ENSELUG00000005731	nsrp1	57	80.000	Esox_lucius
ENSPKIG00000000088	nsrp1	100	50.928	ENSFHEG00000004525	nsrp1	56	62.182	Fundulus_heteroclitus
ENSPKIG00000000088	nsrp1	99	51.253	ENSGMOG00000007152	nsrp1	54	66.798	Gadus_morhua
ENSPKIG00000000088	nsrp1	58	64.158	ENSGAFG00000000710	nsrp1	56	64.364	Gambusia_affinis
ENSPKIG00000000088	nsrp1	100	48.024	ENSGACG00000020516	nsrp1	56	56.522	Gasterosteus_aculeatus
ENSPKIG00000000088	nsrp1	56	67.681	ENSHBUG00000021510	nsrp1	54	67.300	Haplochromis_burtoni
ENSPKIG00000000088	nsrp1	100	46.352	ENSHCOG00000009930	nsrp1	80	67.500	Hippocampus_comes
ENSPKIG00000000088	nsrp1	99	52.878	ENSIPUG00000019291	nsrp1	58	66.165	Ictalurus_punctatus
ENSPKIG00000000088	nsrp1	100	51.553	ENSKMAG00000019403	nsrp1	57	63.406	Kryptolebias_marmoratus
ENSPKIG00000000088	nsrp1	100	49.787	ENSLBEG00000027763	nsrp1	55	60.076	Labrus_bergylta
ENSPKIG00000000088	nsrp1	100	40.430	ENSLOCG00000006654	nsrp1	65	48.845	Lepisosteus_oculatus
ENSPKIG00000000088	nsrp1	100	50.000	ENSMAMG00000020195	nsrp1	57	62.182	Mastacembelus_armatus
ENSPKIG00000000088	nsrp1	57	67.910	ENSMZEG00005024743	nsrp1	57	67.910	Maylandia_zebra
ENSPKIG00000000088	nsrp1	98	45.309	ENSMMOG00000010908	nsrp1	59	53.220	Mola_mola
ENSPKIG00000000088	nsrp1	100	51.313	ENSMALG00000018409	nsrp1	55	63.534	Monopterus_albus
ENSPKIG00000000088	nsrp1	100	43.327	MGP_CAROLIEiJ_G0016769	Nsrp1	96	68.000	Mus_caroli
ENSPKIG00000000088	nsrp1	100	44.037	ENSMUSG00000037958	Nsrp1	96	66.667	Mus_musculus
ENSPKIG00000000088	nsrp1	100	41.924	MGP_PahariEiJ_G0017906	Nsrp1	96	64.000	Mus_pahari
ENSPKIG00000000088	nsrp1	100	49.299	ENSONIG00000005565	nsrp1	67	60.596	Oreochromis_niloticus
ENSPKIG00000000088	nsrp1	100	55.602	ENSORLG00000003135	nsrp1	59	66.667	Oryzias_latipes
ENSPKIG00000000088	nsrp1	100	54.244	ENSORLG00020016065	nsrp1	59	63.830	Oryzias_latipes_hni
ENSPKIG00000000088	nsrp1	100	55.342	ENSORLG00015020804	nsrp1	59	65.799	Oryzias_latipes_hsok
ENSPKIG00000000088	nsrp1	100	49.901	ENSPMGG00000021712	nsrp1	55	66.667	Periophthalmus_magnuspinnatus
ENSPKIG00000000088	nsrp1	100	43.116	ENSPEMG00000021659	Nsrp1	51	71.053	Peromyscus_maniculatus_bairdii
ENSPKIG00000000088	nsrp1	58	64.516	ENSPFOG00000011548	nsrp1	56	64.727	Poecilia_formosa
ENSPKIG00000000088	nsrp1	58	64.516	ENSPLAG00000005053	nsrp1	57	64.727	Poecilia_latipinna
ENSPKIG00000000088	nsrp1	58	63.799	ENSPMEG00000013288	nsrp1	57	64.000	Poecilia_mexicana
ENSPKIG00000000088	nsrp1	58	64.516	ENSPREG00000009861	nsrp1	56	64.727	Poecilia_reticulata
ENSPKIG00000000088	nsrp1	53	59.091	ENSPNYG00000024136	nsrp1	50	59.470	Pundamilia_nyererei
ENSPKIG00000000088	nsrp1	99	51.815	ENSPNAG00000013616	nsrp1	56	66.412	Pygocentrus_nattereri
ENSPKIG00000000088	nsrp1	100	62.500	ENSSFOG00015004371	nsrp1	56	70.037	Scleropages_formosus
ENSPKIG00000000088	nsrp1	100	51.116	ENSSMAG00000019880	nsrp1	57	62.774	Scophthalmus_maximus
ENSPKIG00000000088	nsrp1	56	63.197	ENSSDUG00000016675	nsrp1	55	63.433	Seriola_dumerili
ENSPKIG00000000088	nsrp1	56	63.569	ENSSLDG00000014686	nsrp1	55	63.806	Seriola_lalandi_dorsalis
ENSPKIG00000000088	nsrp1	57	66.182	ENSSPAG00000002693	nsrp1	57	66.182	Stegastes_partitus
ENSPKIG00000000088	nsrp1	60	65.108	ENSTRUG00000000226	nsrp1	58	66.160	Takifugu_rubripes
ENSPKIG00000000088	nsrp1	58	64.964	ENSTNIG00000016161	nsrp1	81	65.185	Tetraodon_nigroviridis
ENSPKIG00000000088	nsrp1	58	64.516	ENSXMAG00000029464	nsrp1	57	64.727	Xiphophorus_maculatus