EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000000535 (Gene tree)
Gene ID: 111853076
Gene Symbol: -
Alias: -
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 20322 bases
Position: chrPGUA01000026.1:1155498-1175819
Accession: 111853076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000012912	RRM_1	PF00076.22	3.6e-11	1	1
ENSPKIP00000012924	RRM_1	PF00076.22	3.6e-11	1	1
ENSPKIP00000012929	RRM_1	PF00076.22	4.5e-11	1	1
ENSPKIP00000012939	RRM_1	PF00076.22	5.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000037335	-	1295	-	ENSPKIP00000012929	215 (aa)	-	-
ENSPKIT00000037345	-	1053	-	ENSPKIP00000012939	226 (aa)	-	-
ENSPKIT00000037330	-	567	-	ENSPKIP00000012924	188 (aa)	-	-
ENSPKIT00000037317	-	1232	-	ENSPKIP00000012912	194 (aa)	XP_023685370	UPI000CD654B4

Gene Model

Click here to download ENSPKIG00000000535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000000535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000000535	-	98	67.179	ENSPKIG00000012634	rbpms2b	99	67.179
ENSPKIG00000000535	-	97	86.243	ENSPKIG00000004836	rbpms	100	86.243
ENSPKIG00000000535	-	99	67.010	ENSPKIG00000022509	rbpms2a	99	68.687

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000000535	-	99	81.443	ENSG00000157110	RBPMS	99	83.036	Homo_sapiens
ENSPKIG00000000535	-	100	90.722	ENSAPOG00000022304	RBPMS	100	90.722	Acanthochromis_polyacanthus
ENSPKIG00000000535	-	82	86.538	ENSAMEG00000001522	RBPMS	75	84.146	Ailuropoda_melanoleuca
ENSPKIG00000000535	-	63	92.373	ENSACIG00000011395	RBPMS	77	79.861	Amphilophus_citrinellus
ENSPKIG00000000535	-	100	90.722	ENSAOCG00000007731	RBPMS	100	90.722	Amphiprion_ocellaris
ENSPKIG00000000535	-	100	90.722	ENSAPEG00000023543	RBPMS	100	90.722	Amphiprion_percula
ENSPKIG00000000535	-	100	91.753	ENSATEG00000018184	RBPMS	100	91.753	Anabas_testudineus
ENSPKIG00000000535	-	100	80.711	ENSACAG00000003012	RBPMS	100	80.711	Anolis_carolinensis
ENSPKIG00000000535	-	99	81.443	ENSANAG00000028150	RBPMS	99	81.443	Aotus_nancymaae
ENSPKIG00000000535	-	100	90.722	ENSACLG00000002926	RBPMS	100	90.722	Astatotilapia_calliptera
ENSPKIG00000000535	-	99	87.500	ENSAMXG00000033491	rbpms	99	87.500	Astyanax_mexicanus
ENSPKIG00000000535	-	99	81.443	ENSBTAG00000033727	RBPMS	80	82.286	Bos_taurus
ENSPKIG00000000535	-	99	81.443	ENSCJAG00000012366	RBPMS	99	81.443	Callithrix_jacchus
ENSPKIG00000000535	-	90	82.286	ENSCAFG00000006503	RBPMS	80	82.286	Canis_familiaris
ENSPKIG00000000535	-	90	82.286	ENSCAFG00020001031	RBPMS	80	82.286	Canis_lupus_dingo
ENSPKIG00000000535	-	99	74.872	ENSCHIG00000027156	RBPMS	99	74.872	Capra_hircus
ENSPKIG00000000535	-	59	89.091	ENSTSYG00000013982	RBPMS	83	89.091	Carlito_syrichta
ENSPKIG00000000535	-	99	81.959	ENSCPOG00000038597	RBPMS	99	81.959	Cavia_porcellus
ENSPKIG00000000535	-	99	81.443	ENSCCAG00000033226	RBPMS	99	81.443	Cebus_capucinus
ENSPKIG00000000535	-	99	81.443	ENSCATG00000036486	RBPMS	99	81.443	Cercocebus_atys
ENSPKIG00000000535	-	92	85.632	ENSCLAG00000001518	RBPMS	100	85.632	Chinchilla_lanigera
ENSPKIG00000000535	-	90	82.286	ENSCSAG00000015838	RBPMS	80	82.286	Chlorocebus_sabaeus
ENSPKIG00000000535	-	82	87.097	ENSCHOG00000008745	RBPMS	79	87.097	Choloepus_hoffmanni
ENSPKIG00000000535	-	100	81.026	ENSCPBG00000013437	RBPMS	100	81.026	Chrysemys_picta_bellii
ENSPKIG00000000535	-	92	85.632	ENSCANG00000034997	RBPMS	100	85.632	Colobus_angolensis_palliatus
ENSPKIG00000000535	-	97	78.947	ENSCGRG00001002814	Rbpms	96	82.632	Cricetulus_griseus_chok1gshd
ENSPKIG00000000535	-	92	81.143	ENSCGRG00000006095	Rbpms	100	85.143	Cricetulus_griseus_crigri
ENSPKIG00000000535	-	100	89.175	ENSCSEG00000002777	rbpms	99	90.608	Cynoglossus_semilaevis
ENSPKIG00000000535	-	100	90.722	ENSCVAG00000013975	RBPMS	100	90.722	Cyprinodon_variegatus
ENSPKIG00000000535	-	90	69.822	ENSDARG00000099396	rbpms	100	69.822	Danio_rerio
ENSPKIG00000000535	-	90	81.921	ENSDNOG00000008126	RBPMS	81	81.921	Dasypus_novemcinctus
ENSPKIG00000000535	-	90	82.857	ENSETEG00000017582	RBPMS	80	82.857	Echinops_telfairi
ENSPKIG00000000535	-	82	87.097	ENSEASG00005016962	RBPMS	78	87.662	Equus_asinus_asinus
ENSPKIG00000000535	-	90	82.857	ENSECAG00000020735	RBPMS	78	87.662	Equus_caballus
ENSPKIG00000000535	-	100	89.175	ENSELUG00000009787	rbpms	100	89.175	Esox_lucius
ENSPKIG00000000535	-	99	81.959	ENSFCAG00000025639	-	99	81.959	Felis_catus
ENSPKIG00000000535	-	91	52.326	ENSFCAG00000022292	-	93	47.959	Felis_catus
ENSPKIG00000000535	-	92	85.632	ENSFDAG00000012078	RBPMS	100	85.632	Fukomys_damarensis
ENSPKIG00000000535	-	100	91.237	ENSFHEG00000000618	rbpms	100	91.237	Fundulus_heteroclitus
ENSPKIG00000000535	-	77	55.333	ENSGMOG00000009646	-	100	55.333	Gadus_morhua
ENSPKIG00000000535	-	100	91.237	ENSGAFG00000016566	RBPMS	100	91.237	Gambusia_affinis
ENSPKIG00000000535	-	100	79.897	ENSGACG00000019471	rbpms	100	79.897	Gasterosteus_aculeatus
ENSPKIG00000000535	-	62	84.483	ENSGAGG00000023634	RBPMS	54	82.258	Gopherus_agassizii
ENSPKIG00000000535	-	100	90.722	ENSHBUG00000005888	RBPMS	100	90.722	Haplochromis_burtoni
ENSPKIG00000000535	-	99	81.443	ENSHGLG00000002303	RBPMS	99	81.443	Heterocephalus_glaber_female
ENSPKIG00000000535	-	92	85.632	ENSHGLG00100008787	RBPMS	100	85.632	Heterocephalus_glaber_male
ENSPKIG00000000535	-	98	91.099	ENSHCOG00000005774	rbpms	99	91.099	Hippocampus_comes
ENSPKIG00000000535	-	100	84.103	ENSIPUG00000012459	RBPMS	100	84.103	Ictalurus_punctatus
ENSPKIG00000000535	-	99	81.959	ENSSTOG00000026546	RBPMS	99	81.959	Ictidomys_tridecemlineatus
ENSPKIG00000000535	-	99	81.443	ENSJJAG00000014024	Rbpms	99	81.443	Jaculus_jaculus
ENSPKIG00000000535	-	92	75.000	ENSKMAG00000006377	RBPMS	88	76.571	Kryptolebias_marmoratus
ENSPKIG00000000535	-	100	90.722	ENSLBEG00000027989	RBPMS	100	90.722	Labrus_bergylta
ENSPKIG00000000535	-	94	91.525	ENSLOCG00000013199	RBPMS	97	91.525	Lepisosteus_oculatus
ENSPKIG00000000535	-	90	82.286	ENSLAFG00000000209	RBPMS	80	82.286	Loxodonta_africana
ENSPKIG00000000535	-	99	81.443	ENSMFAG00000036911	RBPMS	99	81.443	Macaca_fascicularis
ENSPKIG00000000535	-	99	81.443	ENSMMUG00000000458	RBPMS	99	81.443	Macaca_mulatta
ENSPKIG00000000535	-	99	81.443	ENSMNEG00000043805	RBPMS	99	81.443	Macaca_nemestrina
ENSPKIG00000000535	-	92	85.632	ENSMLEG00000015635	RBPMS	100	85.632	Mandrillus_leucophaeus
ENSPKIG00000000535	-	68	92.366	ENSMAMG00000004604	RBPMS	71	90.370	Mastacembelus_armatus
ENSPKIG00000000535	-	100	90.722	ENSMZEG00005000698	RBPMS	100	90.722	Maylandia_zebra
ENSPKIG00000000535	-	93	85.143	ENSMGAG00000005088	RBPMS	90	85.143	Meleagris_gallopavo
ENSPKIG00000000535	-	97	78.947	ENSMAUG00000018892	Rbpms	96	82.632	Mesocricetus_auratus
ENSPKIG00000000535	-	99	77.835	ENSMICG00000001295	RBPMS	99	80.928	Microcebus_murinus
ENSPKIG00000000535	-	97	78.947	ENSMOCG00000014009	Rbpms	96	82.632	Microtus_ochrogaster
ENSPKIG00000000535	-	85	90.566	ENSMMOG00000012036	RBPMS	66	93.590	Mola_mola
ENSPKIG00000000535	-	99	82.353	ENSMODG00000019006	RBPMS	89	82.540	Monodelphis_domestica
ENSPKIG00000000535	-	100	89.175	ENSMALG00000003261	RBPMS	100	89.175	Monopterus_albus
ENSPKIG00000000535	-	97	79.474	MGP_CAROLIEiJ_G0030970	Rbpms	96	83.158	Mus_caroli
ENSPKIG00000000535	-	97	79.474	ENSMUSG00000031586	Rbpms	96	83.158	Mus_musculus
ENSPKIG00000000535	-	100	78.173	MGP_PahariEiJ_G0021439	Rbpms	100	81.726	Mus_pahari
ENSPKIG00000000535	-	97	79.474	MGP_SPRETEiJ_G0032087	Rbpms	96	83.158	Mus_spretus
ENSPKIG00000000535	-	82	86.538	ENSMPUG00000011314	RBPMS	75	84.146	Mustela_putorius_furo
ENSPKIG00000000535	-	99	81.443	ENSMLUG00000009391	RBPMS	99	82.692	Myotis_lucifugus
ENSPKIG00000000535	-	90	82.286	ENSNGAG00000011141	Rbpms	80	82.286	Nannospalax_galili
ENSPKIG00000000535	-	93	93.678	ENSNBRG00000003313	RBPMS	97	93.678	Neolamprologus_brichardi
ENSPKIG00000000535	-	99	81.443	ENSNLEG00000036183	-	99	81.443	Nomascus_leucogenys
ENSPKIG00000000535	-	67	82.308	ENSOPRG00000013151	RBPMS	59	82.308	Ochotona_princeps
ENSPKIG00000000535	-	99	81.443	ENSODEG00000006700	RBPMS	99	81.443	Octodon_degus
ENSPKIG00000000535	-	93	93.103	ENSONIG00000007546	RBPMS	100	93.103	Oreochromis_niloticus
ENSPKIG00000000535	-	90	82.286	ENSOCUG00000008572	RBPMS	80	82.286	Oryctolagus_cuniculus
ENSPKIG00000000535	-	100	91.237	ENSORLG00000004135	-	100	91.237	Oryzias_latipes
ENSPKIG00000000535	-	100	91.237	ENSORLG00020016179	RBPMS	100	91.237	Oryzias_latipes_hni
ENSPKIG00000000535	-	100	91.237	ENSORLG00015013770	RBPMS	100	91.237	Oryzias_latipes_hsok
ENSPKIG00000000535	-	100	91.753	ENSOMEG00000005044	RBPMS	100	91.753	Oryzias_melastigma
ENSPKIG00000000535	-	92	81.006	ENSOGAG00000030298	RBPMS	80	81.006	Otolemur_garnettii
ENSPKIG00000000535	-	60	88.393	ENSOARG00000010366	RBPMS	94	78.947	Ovis_aries
ENSPKIG00000000535	-	92	85.632	ENSPPAG00000033108	RBPMS	100	85.632	Pan_paniscus
ENSPKIG00000000535	-	99	81.959	ENSPPRG00000004836	RBPMS	99	81.959	Panthera_pardus
ENSPKIG00000000535	-	92	85.632	ENSPTIG00000015964	RBPMS	89	85.632	Panthera_tigris_altaica
ENSPKIG00000000535	-	99	81.443	ENSPTRG00000020135	RBPMS	99	81.443	Pan_troglodytes
ENSPKIG00000000535	-	99	81.443	ENSPANG00000008143	RBPMS	99	81.443	Papio_anubis
ENSPKIG00000000535	-	92	85.057	ENSPSIG00000006136	RBPMS	99	85.057	Pelodiscus_sinensis
ENSPKIG00000000535	-	85	91.250	ENSPMGG00000018012	RBPMS	73	93.631	Periophthalmus_magnuspinnatus
ENSPKIG00000000535	-	97	78.534	ENSPEMG00000021130	Rbpms	96	82.199	Peromyscus_maniculatus_bairdii
ENSPKIG00000000535	-	93	84.571	ENSPCIG00000019298	-	71	80.702	Phascolarctos_cinereus
ENSPKIG00000000535	-	100	91.237	ENSPFOG00000017158	RBPMS	100	91.237	Poecilia_formosa
ENSPKIG00000000535	-	100	91.237	ENSPLAG00000010767	RBPMS	100	91.237	Poecilia_latipinna
ENSPKIG00000000535	-	100	91.237	ENSPMEG00000009788	RBPMS	100	91.237	Poecilia_mexicana
ENSPKIG00000000535	-	100	91.237	ENSPREG00000016959	RBPMS	100	91.237	Poecilia_reticulata
ENSPKIG00000000535	-	90	82.286	ENSPPYG00000018487	RBPMS	80	82.286	Pongo_abelii
ENSPKIG00000000535	-	59	88.182	ENSPCAG00000013493	-	100	88.182	Procavia_capensis
ENSPKIG00000000535	-	90	68.000	ENSPCOG00000015948	RBPMS	75	84.615	Propithecus_coquereli
ENSPKIG00000000535	-	90	82.857	ENSPVAG00000001661	RBPMS	80	82.857	Pteropus_vampyrus
ENSPKIG00000000535	-	100	90.722	ENSPNYG00000001172	RBPMS	100	90.722	Pundamilia_nyererei
ENSPKIG00000000535	-	99	91.146	ENSPNAG00000029160	RBPMS	99	91.146	Pygocentrus_nattereri
ENSPKIG00000000535	-	89	78.286	ENSRNOG00000013328	Rbpms	85	82.286	Rattus_norvegicus
ENSPKIG00000000535	-	92	85.632	ENSRBIG00000038218	RBPMS	100	85.632	Rhinopithecus_bieti
ENSPKIG00000000535	-	99	81.443	ENSRROG00000042518	RBPMS	99	81.443	Rhinopithecus_roxellana
ENSPKIG00000000535	-	99	80.928	ENSSBOG00000026670	RBPMS	99	80.928	Saimiri_boliviensis_boliviensis
ENSPKIG00000000535	-	94	84.746	ENSSHAG00000010114	RBPMS	92	83.799	Sarcophilus_harrisii
ENSPKIG00000000535	-	100	91.237	ENSSFOG00015000417	rbpms	100	91.237	Scleropages_formosus
ENSPKIG00000000535	-	93	88.506	ENSSFOG00015017481	-	100	85.714	Scleropages_formosus
ENSPKIG00000000535	-	100	90.206	ENSSMAG00000010871	rbpms	100	90.206	Scophthalmus_maximus
ENSPKIG00000000535	-	100	91.237	ENSSDUG00000010894	RBPMS	100	91.237	Seriola_dumerili
ENSPKIG00000000535	-	100	91.237	ENSSLDG00000012916	RBPMS	100	91.237	Seriola_lalandi_dorsalis
ENSPKIG00000000535	-	90	78.531	ENSSARG00000000274	RBPMS	81	78.531	Sorex_araneus
ENSPKIG00000000535	-	97	82.514	ENSSPUG00000017525	RBPMS	67	85.143	Sphenodon_punctatus
ENSPKIG00000000535	-	99	69.519	ENSSPAG00000004777	rbpms	82	89.630	Stegastes_partitus
ENSPKIG00000000535	-	99	81.959	ENSSSCG00000015846	RBPMS	99	81.959	Sus_scrofa
ENSPKIG00000000535	-	93	84.571	ENSTGUG00000001776	RBPMS	99	80.423	Taeniopygia_guttata
ENSPKIG00000000535	-	100	88.660	ENSTRUG00000000041	RBPMS	100	88.660	Takifugu_rubripes
ENSPKIG00000000535	-	90	82.759	ENSTTRG00000012451	RBPMS	80	82.759	Tursiops_truncatus
ENSPKIG00000000535	-	61	85.217	ENSUAMG00000026353	RBPMS	76	85.345	Ursus_americanus
ENSPKIG00000000535	-	89	82.840	ENSUMAG00000007347	RBPMS	77	86.076	Ursus_maritimus
ENSPKIG00000000535	-	82	87.097	ENSVPAG00000010991	RBPMS	79	87.097	Vicugna_pacos
ENSPKIG00000000535	-	99	81.443	ENSVVUG00000019770	RBPMS	99	81.443	Vulpes_vulpes
ENSPKIG00000000535	-	92	86.207	ENSXETG00000011290	rbpms	100	86.207	Xenopus_tropicalis
ENSPKIG00000000535	-	93	86.782	ENSXCOG00000002436	RBPMS	90	86.782	Xiphophorus_couchianus
ENSPKIG00000000535	-	100	91.237	ENSXMAG00000027637	RBPMS	100	91.237	Xiphophorus_maculatus