EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000000784 (Gene tree)
Gene ID: 111840701
Gene Symbol: sf3b1
Alias: -
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 13782 bases
Position: chrPGUA01000009.1:387866-401647
Accession: 111840701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000013335	SF3b1	PF08920.10	9.1e-48	1	1
ENSPKIP00000013375	SF3b1	PF08920.10	1.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000037798	-	3936	-	ENSPKIP00000013375	1311 (aa)	-	-
ENSPKIT00000037755	-	5663	-	ENSPKIP00000013335	1313 (aa)	XP_023661564	UPI000CD5DA4E

Gene Model

Click here to download ENSPKIG00000000784's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000000784's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000000784	sf3b1	100	94.901	ENSG00000115524	SF3B1	100	95.053	Homo_sapiens
ENSPKIG00000000784	sf3b1	100	96.431	ENSAPOG00000011894	sf3b1	100	96.431	Acanthochromis_polyacanthus
ENSPKIG00000000784	sf3b1	99	94.793	ENSAMEG00000013809	SF3B1	99	94.946	Ailuropoda_melanoleuca
ENSPKIG00000000784	sf3b1	99	95.271	ENSACIG00000020910	sf3b1	97	95.271	Amphilophus_citrinellus
ENSPKIG00000000784	sf3b1	100	96.431	ENSAOCG00000004478	sf3b1	100	96.431	Amphiprion_ocellaris
ENSPKIG00000000784	sf3b1	100	96.431	ENSAPEG00000012937	sf3b1	100	96.431	Amphiprion_percula
ENSPKIG00000000784	sf3b1	100	96.431	ENSATEG00000020435	sf3b1	100	96.431	Anabas_testudineus
ENSPKIG00000000784	sf3b1	99	95.015	ENSAPLG00000003993	SF3B1	99	95.015	Anas_platyrhynchos
ENSPKIG00000000784	sf3b1	100	94.973	ENSACAG00000009612	SF3B1	100	94.973	Anolis_carolinensis
ENSPKIG00000000784	sf3b1	100	94.901	ENSANAG00000021577	SF3B1	100	96.055	Aotus_nancymaae
ENSPKIG00000000784	sf3b1	99	95.209	ENSACLG00000023470	sf3b1	99	95.209	Astatotilapia_calliptera
ENSPKIG00000000784	sf3b1	100	97.039	ENSAMXG00000002219	sf3b1	100	97.039	Astyanax_mexicanus
ENSPKIG00000000784	sf3b1	100	94.825	ENSBTAG00000008915	SF3B1	100	94.977	Bos_taurus
ENSPKIG00000000784	sf3b1	99	64.823	WBGene00011605	sftb-1	99	64.676	Caenorhabditis_elegans
ENSPKIG00000000784	sf3b1	100	94.901	ENSCJAG00000003902	SF3B1	100	95.053	Callithrix_jacchus
ENSPKIG00000000784	sf3b1	100	94.901	ENSCAFG00000010826	SF3B1	100	95.053	Canis_familiaris
ENSPKIG00000000784	sf3b1	100	94.901	ENSCAFG00020004750	SF3B1	100	95.053	Canis_lupus_dingo
ENSPKIG00000000784	sf3b1	100	94.825	ENSCHIG00000015226	SF3B1	100	94.977	Capra_hircus
ENSPKIG00000000784	sf3b1	100	94.825	ENSTSYG00000009214	SF3B1	100	94.977	Carlito_syrichta
ENSPKIG00000000784	sf3b1	99	94.733	ENSCAPG00000006547	SF3B1	99	94.885	Cavia_aperea
ENSPKIG00000000784	sf3b1	99	94.862	ENSCPOG00000009353	SF3B1	100	95.015	Cavia_porcellus
ENSPKIG00000000784	sf3b1	100	94.901	ENSCCAG00000020506	SF3B1	100	95.053	Cebus_capucinus
ENSPKIG00000000784	sf3b1	100	94.901	ENSCATG00000035735	SF3B1	100	95.053	Cercocebus_atys
ENSPKIG00000000784	sf3b1	99	94.866	ENSCLAG00000014767	SF3B1	99	95.019	Chinchilla_lanigera
ENSPKIG00000000784	sf3b1	100	94.901	ENSCSAG00000011505	SF3B1	100	95.053	Chlorocebus_sabaeus
ENSPKIG00000000784	sf3b1	76	92.816	ENSCHOG00000009860	SF3B1	76	92.816	Choloepus_hoffmanni
ENSPKIG00000000784	sf3b1	100	95.202	ENSCPBG00000021902	SF3B1	100	95.202	Chrysemys_picta_bellii
ENSPKIG00000000784	sf3b1	68	78.251	ENSCING00000002558	-	99	78.366	Ciona_intestinalis
ENSPKIG00000000784	sf3b1	99	79.367	ENSCSAVG00000002559	-	99	79.367	Ciona_savignyi
ENSPKIG00000000784	sf3b1	100	94.901	ENSCANG00000029415	SF3B1	100	95.053	Colobus_angolensis_palliatus
ENSPKIG00000000784	sf3b1	100	94.901	ENSCGRG00001016990	Sf3b1	100	95.053	Cricetulus_griseus_chok1gshd
ENSPKIG00000000784	sf3b1	100	94.901	ENSCGRG00000005301	Sf3b1	100	95.053	Cricetulus_griseus_crigri
ENSPKIG00000000784	sf3b1	100	92.079	ENSCSEG00000003860	sf3b1	100	92.079	Cynoglossus_semilaevis
ENSPKIG00000000784	sf3b1	96	96.130	ENSCVAG00000003680	sf3b1	99	96.130	Cyprinodon_variegatus
ENSPKIG00000000784	sf3b1	100	96.055	ENSDARG00000056138	sf3b1	100	96.055	Danio_rerio
ENSPKIG00000000784	sf3b1	100	94.829	ENSDNOG00000011754	SF3B1	100	94.981	Dasypus_novemcinctus
ENSPKIG00000000784	sf3b1	99	92.945	ENSDORG00000002399	Sf3b1	100	92.868	Dipodomys_ordii
ENSPKIG00000000784	sf3b1	99	76.085	FBgn0031266	Sf3b1	99	76.085	Drosophila_melanogaster
ENSPKIG00000000784	sf3b1	83	93.934	ENSETEG00000009188	SF3B1	100	94.118	Echinops_telfairi
ENSPKIG00000000784	sf3b1	99	86.687	ENSEBUG00000004325	sf3b1	100	89.397	Eptatretus_burgeri
ENSPKIG00000000784	sf3b1	100	94.901	ENSEASG00005020159	SF3B1	98	95.053	Equus_asinus_asinus
ENSPKIG00000000784	sf3b1	100	94.901	ENSECAG00000021657	SF3B1	98	95.053	Equus_caballus
ENSPKIG00000000784	sf3b1	87	99.712	ENSEEUG00000000836	SF3B1	81	99.712	Erinaceus_europaeus
ENSPKIG00000000784	sf3b1	100	96.375	ENSELUG00000005977	sf3b1	98	96.375	Esox_lucius
ENSPKIG00000000784	sf3b1	100	94.901	ENSFCAG00000005038	SF3B1	100	95.053	Felis_catus
ENSPKIG00000000784	sf3b1	99	94.939	ENSFALG00000004281	SF3B1	99	94.939	Ficedula_albicollis
ENSPKIG00000000784	sf3b1	100	94.901	ENSFDAG00000017510	SF3B1	100	95.053	Fukomys_damarensis
ENSPKIG00000000784	sf3b1	100	95.068	ENSFHEG00000014333	sf3b1	100	95.068	Fundulus_heteroclitus
ENSPKIG00000000784	sf3b1	100	95.289	ENSGMOG00000006773	sf3b1	100	95.593	Gadus_morhua
ENSPKIG00000000784	sf3b1	100	95.050	ENSGALG00000008038	SF3B1	100	95.050	Gallus_gallus
ENSPKIG00000000784	sf3b1	98	95.988	ENSGAFG00000000704	sf3b1	99	95.988	Gambusia_affinis
ENSPKIG00000000784	sf3b1	99	95.351	ENSGACG00000008839	sf3b1	99	95.579	Gasterosteus_aculeatus
ENSPKIG00000000784	sf3b1	100	94.554	ENSGAGG00000017478	SF3B1	100	94.554	Gopherus_agassizii
ENSPKIG00000000784	sf3b1	99	89.793	ENSGGOG00000009264	SF3B1	99	89.962	Gorilla_gorilla
ENSPKIG00000000784	sf3b1	99	95.209	ENSHBUG00000007705	sf3b1	99	95.209	Haplochromis_burtoni
ENSPKIG00000000784	sf3b1	99	94.866	ENSHGLG00000008285	-	99	95.019	Heterocephalus_glaber_female
ENSPKIG00000000784	sf3b1	99	92.874	ENSHGLG00100005535	-	99	93.027	Heterocephalus_glaber_male
ENSPKIG00000000784	sf3b1	100	95.616	ENSHCOG00000016775	sf3b1	100	95.616	Hippocampus_comes
ENSPKIG00000000784	sf3b1	100	96.659	ENSIPUG00000013171	sf3b1	100	96.659	Ictalurus_punctatus
ENSPKIG00000000784	sf3b1	100	94.901	ENSSTOG00000011034	SF3B1	100	95.053	Ictidomys_tridecemlineatus
ENSPKIG00000000784	sf3b1	99	94.846	ENSJJAG00000010903	Sf3b1	99	95.000	Jaculus_jaculus
ENSPKIG00000000784	sf3b1	100	95.072	ENSKMAG00000004009	sf3b1	100	95.148	Kryptolebias_marmoratus
ENSPKIG00000000784	sf3b1	99	95.881	ENSLBEG00000022208	sf3b1	99	95.881	Labrus_bergylta
ENSPKIG00000000784	sf3b1	99	91.387	ENSLACG00000014832	SF3B1	99	91.387	Latimeria_chalumnae
ENSPKIG00000000784	sf3b1	100	97.043	ENSLOCG00000003899	sf3b1	100	97.043	Lepisosteus_oculatus
ENSPKIG00000000784	sf3b1	100	94.901	ENSLAFG00000001956	SF3B1	100	95.053	Loxodonta_africana
ENSPKIG00000000784	sf3b1	99	94.866	ENSMMUG00000022430	SF3B1	99	95.019	Macaca_mulatta
ENSPKIG00000000784	sf3b1	100	94.901	ENSMNEG00000042333	SF3B1	100	96.055	Macaca_nemestrina
ENSPKIG00000000784	sf3b1	95	89.520	ENSMLEG00000026141	SF3B1	98	90.330	Mandrillus_leucophaeus
ENSPKIG00000000784	sf3b1	100	96.279	ENSMAMG00000010241	sf3b1	100	96.279	Mastacembelus_armatus
ENSPKIG00000000784	sf3b1	99	95.209	ENSMZEG00005021254	sf3b1	99	95.209	Maylandia_zebra
ENSPKIG00000000784	sf3b1	99	94.402	ENSMGAG00000007017	SF3B1	99	94.402	Meleagris_gallopavo
ENSPKIG00000000784	sf3b1	99	90.651	ENSMAUG00000009071	Sf3b1	99	90.805	Mesocricetus_auratus
ENSPKIG00000000784	sf3b1	100	94.825	ENSMICG00000013879	SF3B1	100	94.977	Microcebus_murinus
ENSPKIG00000000784	sf3b1	99	90.644	ENSMOCG00000000455	Sf3b1	99	90.644	Microtus_ochrogaster
ENSPKIG00000000784	sf3b1	84	95.993	ENSMMOG00000000475	sf3b1	100	95.993	Mola_mola
ENSPKIG00000000784	sf3b1	100	94.444	ENSMODG00000012275	SF3B1	100	94.597	Monodelphis_domestica
ENSPKIG00000000784	sf3b1	100	96.431	ENSMALG00000017211	sf3b1	100	96.431	Monopterus_albus
ENSPKIG00000000784	sf3b1	100	94.901	MGP_CAROLIEiJ_G0014141	Sf3b1	100	95.053	Mus_caroli
ENSPKIG00000000784	sf3b1	100	94.901	ENSMUSG00000025982	Sf3b1	100	95.053	Mus_musculus
ENSPKIG00000000784	sf3b1	100	94.901	MGP_SPRETEiJ_G0014947	Sf3b1	100	95.053	Mus_spretus
ENSPKIG00000000784	sf3b1	100	94.901	ENSMPUG00000007799	SF3B1	100	95.053	Mustela_putorius_furo
ENSPKIG00000000784	sf3b1	100	93.760	ENSMLUG00000000840	SF3B1	100	93.912	Myotis_lucifugus
ENSPKIG00000000784	sf3b1	99	94.580	ENSNGAG00000021884	-	100	94.733	Nannospalax_galili
ENSPKIG00000000784	sf3b1	99	90.625	ENSNBRG00000015816	sf3b1	99	90.625	Neolamprologus_brichardi
ENSPKIG00000000784	sf3b1	100	94.901	ENSNLEG00000006861	SF3B1	100	95.053	Nomascus_leucogenys
ENSPKIG00000000784	sf3b1	69	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSPKIG00000000784	sf3b1	100	84.323	ENSOPRG00000008596	SF3B1	100	84.323	Ochotona_princeps
ENSPKIG00000000784	sf3b1	100	94.901	ENSODEG00000011153	-	100	95.053	Octodon_degus
ENSPKIG00000000784	sf3b1	99	95.209	ENSONIG00000013758	sf3b1	99	95.209	Oreochromis_niloticus
ENSPKIG00000000784	sf3b1	83	96.313	ENSOCUG00000012722	-	96	96.313	Oryctolagus_cuniculus
ENSPKIG00000000784	sf3b1	100	95.444	ENSORLG00000020219	sf3b1	100	95.444	Oryzias_latipes
ENSPKIG00000000784	sf3b1	100	95.444	ENSORLG00020001746	sf3b1	100	95.444	Oryzias_latipes_hni
ENSPKIG00000000784	sf3b1	64	94.299	ENSORLG00015001759	sf3b1	98	94.299	Oryzias_latipes_hsok
ENSPKIG00000000784	sf3b1	100	95.675	ENSOMEG00000019231	sf3b1	100	95.675	Oryzias_melastigma
ENSPKIG00000000784	sf3b1	100	94.825	ENSOARG00000015374	SF3B1	100	94.977	Ovis_aries
ENSPKIG00000000784	sf3b1	100	94.901	ENSPPAG00000035007	SF3B1	100	95.053	Pan_paniscus
ENSPKIG00000000784	sf3b1	100	94.901	ENSPPRG00000009090	SF3B1	100	95.053	Panthera_pardus
ENSPKIG00000000784	sf3b1	100	94.901	ENSPTIG00000021557	SF3B1	100	95.053	Panthera_tigris_altaica
ENSPKIG00000000784	sf3b1	99	87.385	ENSPTRG00000012771	SF3B1	99	87.538	Pan_troglodytes
ENSPKIG00000000784	sf3b1	100	94.901	ENSPANG00000013417	SF3B1	100	95.053	Papio_anubis
ENSPKIG00000000784	sf3b1	99	93.860	ENSPSIG00000017222	SF3B1	98	93.860	Pelodiscus_sinensis
ENSPKIG00000000784	sf3b1	91	96.218	ENSPMGG00000004330	sf3b1	99	96.218	Periophthalmus_magnuspinnatus
ENSPKIG00000000784	sf3b1	99	94.866	ENSPEMG00000010699	Sf3b1	100	95.019	Peromyscus_maniculatus_bairdii
ENSPKIG00000000784	sf3b1	100	89.637	ENSPMAG00000001311	sf3b1	100	89.939	Petromyzon_marinus
ENSPKIG00000000784	sf3b1	100	94.521	ENSPCIG00000010642	SF3B1	100	94.673	Phascolarctos_cinereus
ENSPKIG00000000784	sf3b1	100	95.830	ENSPFOG00000000073	sf3b1	100	95.830	Poecilia_formosa
ENSPKIG00000000784	sf3b1	100	95.827	ENSPLAG00000002293	sf3b1	100	95.827	Poecilia_latipinna
ENSPKIG00000000784	sf3b1	100	95.903	ENSPMEG00000000446	sf3b1	98	95.903	Poecilia_mexicana
ENSPKIG00000000784	sf3b1	100	96.055	ENSPREG00000019652	sf3b1	100	96.055	Poecilia_reticulata
ENSPKIG00000000784	sf3b1	100	97.235	ENSPPYG00000013044	SF3B1	97	95.380	Pongo_abelii
ENSPKIG00000000784	sf3b1	100	94.749	ENSPCAG00000009292	SF3B1	100	94.901	Procavia_capensis
ENSPKIG00000000784	sf3b1	100	94.825	ENSPCOG00000024074	SF3B1	100	94.977	Propithecus_coquereli
ENSPKIG00000000784	sf3b1	100	94.901	ENSPVAG00000008302	SF3B1	100	95.053	Pteropus_vampyrus
ENSPKIG00000000784	sf3b1	99	95.133	ENSPNYG00000014939	sf3b1	99	95.133	Pundamilia_nyererei
ENSPKIG00000000784	sf3b1	100	96.735	ENSPNAG00000008288	sf3b1	100	96.735	Pygocentrus_nattereri
ENSPKIG00000000784	sf3b1	100	94.901	ENSRNOG00000013516	Sf3b1	100	95.053	Rattus_norvegicus
ENSPKIG00000000784	sf3b1	99	91.159	ENSRBIG00000026096	SF3B1	100	91.311	Rhinopithecus_bieti
ENSPKIG00000000784	sf3b1	100	94.901	ENSRROG00000031308	SF3B1	100	95.053	Rhinopithecus_roxellana
ENSPKIG00000000784	sf3b1	100	94.901	ENSSBOG00000020080	SF3B1	100	95.053	Saimiri_boliviensis_boliviensis
ENSPKIG00000000784	sf3b1	100	94.444	ENSSHAG00000017564	SF3B1	100	94.597	Sarcophilus_harrisii
ENSPKIG00000000784	sf3b1	100	97.494	ENSSFOG00015021535	sf3b1	100	97.494	Scleropages_formosus
ENSPKIG00000000784	sf3b1	99	95.754	ENSSMAG00000013977	sf3b1	99	95.754	Scophthalmus_maximus
ENSPKIG00000000784	sf3b1	100	96.203	ENSSDUG00000017422	sf3b1	100	96.203	Seriola_dumerili
ENSPKIG00000000784	sf3b1	100	96.128	ENSSLDG00000019495	sf3b1	100	96.128	Seriola_lalandi_dorsalis
ENSPKIG00000000784	sf3b1	75	98.592	ENSSARG00000007016	SF3B1	76	98.592	Sorex_araneus
ENSPKIG00000000784	sf3b1	100	94.897	ENSSPUG00000000410	SF3B1	100	94.897	Sphenodon_punctatus
ENSPKIG00000000784	sf3b1	100	96.279	ENSSPAG00000010451	sf3b1	99	96.279	Stegastes_partitus
ENSPKIG00000000784	sf3b1	91	94.579	ENSSSCG00000016075	SF3B1	100	96.055	Sus_scrofa
ENSPKIG00000000784	sf3b1	100	95.050	ENSTGUG00000010553	SF3B1	100	95.050	Taeniopygia_guttata
ENSPKIG00000000784	sf3b1	100	96.052	ENSTRUG00000015534	sf3b1	100	96.052	Takifugu_rubripes
ENSPKIG00000000784	sf3b1	87	97.010	ENSTBEG00000008714	SF3B1	93	97.521	Tupaia_belangeri
ENSPKIG00000000784	sf3b1	92	93.173	ENSTTRG00000003414	SF3B1	92	93.173	Tursiops_truncatus
ENSPKIG00000000784	sf3b1	94	86.623	ENSUAMG00000018506	SF3B1	99	97.571	Ursus_americanus
ENSPKIG00000000784	sf3b1	100	94.901	ENSUMAG00000020945	SF3B1	100	95.053	Ursus_maritimus
ENSPKIG00000000784	sf3b1	96	93.184	ENSVPAG00000005798	SF3B1	96	93.184	Vicugna_pacos
ENSPKIG00000000784	sf3b1	100	94.901	ENSVVUG00000025948	SF3B1	95	95.053	Vulpes_vulpes
ENSPKIG00000000784	sf3b1	100	93.151	ENSXETG00000013339	sf3b1	100	93.151	Xenopus_tropicalis
ENSPKIG00000000784	sf3b1	100	91.857	ENSXCOG00000018086	sf3b1	100	92.009	Xiphophorus_couchianus
ENSPKIG00000000784	sf3b1	100	95.903	ENSXMAG00000007369	sf3b1	100	96.234	Xiphophorus_maculatus