EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000000875 (Gene tree)
Gene ID: 111843140
Gene Symbol: prdm4
Alias: -
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 15946 bases
Position: chrPGUA01000099.1:889534-905479
Accession: 111843140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000013455	zf-C2H2	PF00096.26	1.5e-21	1	5
ENSPKIP00000013455	zf-C2H2	PF00096.26	1.5e-21	2	5
ENSPKIP00000013455	zf-C2H2	PF00096.26	1.5e-21	3	5
ENSPKIP00000013455	zf-C2H2	PF00096.26	1.5e-21	4	5
ENSPKIP00000013455	zf-C2H2	PF00096.26	1.5e-21	5	5
ENSPKIP00000013445	zf-C2H2	PF00096.26	1.9e-20	1	4
ENSPKIP00000013445	zf-C2H2	PF00096.26	1.9e-20	2	4
ENSPKIP00000013445	zf-C2H2	PF00096.26	1.9e-20	3	4
ENSPKIP00000013445	zf-C2H2	PF00096.26	1.9e-20	4	4
ENSPKIP00000013455	zf-met	PF12874.7	1.1e-05	1	1
ENSPKIP00000013445	zf-met	PF12874.7	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000037879	-	3440	-	ENSPKIP00000013455	816 (aa)	XP_023666207	UPI000CD63084
ENSPKIT00000037869	-	2478	-	ENSPKIP00000013445	825 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000000875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000000875's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000000875	prdm4	50	35.965	ENSPKIG00000020637	PRDM15	60	35.965

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000000875	prdm4	99	60.523	ENSG00000110851	PRDM4	97	72.603	Homo_sapiens
ENSPKIG00000000875	prdm4	99	59.739	ENSAMEG00000016174	PRDM4	99	60.333	Ailuropoda_melanoleuca
ENSPKIG00000000875	prdm4	99	59.572	ENSAPLG00000009846	PRDM4	99	59.572	Anas_platyrhynchos
ENSPKIG00000000875	prdm4	99	60.404	ENSANAG00000024800	PRDM4	99	59.691	Aotus_nancymaae
ENSPKIG00000000875	prdm4	99	60.214	ENSBTAG00000012999	PRDM4	99	60.333	Bos_taurus
ENSPKIG00000000875	prdm4	92	76.068	ENSCJAG00000015261	PRDM4	93	74.790	Callithrix_jacchus
ENSPKIG00000000875	prdm4	99	60.285	ENSCAFG00000001788	PRDM4	99	60.285	Canis_familiaris
ENSPKIG00000000875	prdm4	99	60.285	ENSCAFG00020004916	PRDM4	99	60.285	Canis_lupus_dingo
ENSPKIG00000000875	prdm4	99	60.333	ENSCHIG00000019409	PRDM4	99	60.451	Capra_hircus
ENSPKIG00000000875	prdm4	99	60.404	ENSTSYG00000009248	PRDM4	99	59.691	Carlito_syrichta
ENSPKIG00000000875	prdm4	99	59.405	ENSCAPG00000013937	PRDM4	99	59.881	Cavia_aperea
ENSPKIG00000000875	prdm4	99	59.080	ENSCPOG00000022385	PRDM4	99	59.717	Cavia_porcellus
ENSPKIG00000000875	prdm4	99	60.404	ENSCCAG00000036033	PRDM4	99	59.691	Cebus_capucinus
ENSPKIG00000000875	prdm4	99	60.404	ENSCATG00000044797	PRDM4	99	59.691	Cercocebus_atys
ENSPKIG00000000875	prdm4	99	59.198	ENSCLAG00000007545	PRDM4	99	59.198	Chinchilla_lanigera
ENSPKIG00000000875	prdm4	99	60.404	ENSCSAG00000002896	PRDM4	99	59.691	Chlorocebus_sabaeus
ENSPKIG00000000875	prdm4	62	80.374	ENSCHOG00000001744	PRDM4	66	80.374	Choloepus_hoffmanni
ENSPKIG00000000875	prdm4	99	59.857	ENSCPBG00000023187	PRDM4	99	59.264	Chrysemys_picta_bellii
ENSPKIG00000000875	prdm4	99	60.404	ENSCANG00000021804	PRDM4	99	59.691	Colobus_angolensis_palliatus
ENSPKIG00000000875	prdm4	99	59.364	ENSCGRG00001015102	-	99	59.246	Cricetulus_griseus_chok1gshd
ENSPKIG00000000875	prdm4	97	59.146	ENSCGRG00000004044	-	99	59.024	Cricetulus_griseus_crigri
ENSPKIG00000000875	prdm4	99	60.095	ENSDNOG00000032478	PRDM4	99	60.219	Dasypus_novemcinctus
ENSPKIG00000000875	prdm4	93	52.665	ENSDORG00000015081	-	99	50.237	Dipodomys_ordii
ENSPKIG00000000875	prdm4	93	44.158	ENSEBUG00000003775	prdm4	99	44.489	Eptatretus_burgeri
ENSPKIG00000000875	prdm4	99	60.761	ENSECAG00000015423	PRDM4	99	60.642	Equus_caballus
ENSPKIG00000000875	prdm4	95	57.789	ENSEEUG00000006569	PRDM4	99	57.915	Erinaceus_europaeus
ENSPKIG00000000875	prdm4	100	73.902	ENSELUG00000015265	prdm4	100	73.902	Esox_lucius
ENSPKIG00000000875	prdm4	99	60.285	ENSFCAG00000022478	PRDM4	99	60.285	Felis_catus
ENSPKIG00000000875	prdm4	99	59.264	ENSFALG00000013342	PRDM4	99	59.620	Ficedula_albicollis
ENSPKIG00000000875	prdm4	99	58.649	ENSGALG00000012619	PRDM4	99	58.768	Gallus_gallus
ENSPKIG00000000875	prdm4	99	59.857	ENSGAGG00000002763	PRDM4	94	59.264	Gopherus_agassizii
ENSPKIG00000000875	prdm4	99	60.523	ENSGGOG00000001244	PRDM4	99	59.810	Gorilla_gorilla
ENSPKIG00000000875	prdm4	99	59.572	ENSHGLG00000004590	PRDM4	98	59.334	Heterocephalus_glaber_female
ENSPKIG00000000875	prdm4	99	59.246	ENSHGLG00100007464	PRDM4	99	59.011	Heterocephalus_glaber_male
ENSPKIG00000000875	prdm4	99	68.864	ENSIPUG00000024162	prdm4	100	67.661	Ictalurus_punctatus
ENSPKIG00000000875	prdm4	99	60.285	ENSSTOG00000016168	PRDM4	99	59.572	Ictidomys_tridecemlineatus
ENSPKIG00000000875	prdm4	80	61.565	ENSJJAG00000022448	-	94	58.958	Jaculus_jaculus
ENSPKIG00000000875	prdm4	93	64.459	ENSLACG00000007452	PRDM4	94	64.331	Latimeria_chalumnae
ENSPKIG00000000875	prdm4	77	84.706	ENSLOCG00000017092	prdm4	93	49.737	Lepisosteus_oculatus
ENSPKIG00000000875	prdm4	93	61.869	ENSLAFG00000001483	PRDM4	96	61.587	Loxodonta_africana
ENSPKIG00000000875	prdm4	99	60.404	ENSMFAG00000041862	PRDM4	99	59.691	Macaca_fascicularis
ENSPKIG00000000875	prdm4	99	60.404	ENSMMUG00000015550	PRDM4	99	59.691	Macaca_mulatta
ENSPKIG00000000875	prdm4	99	60.642	ENSMNEG00000032319	PRDM4	99	59.929	Macaca_nemestrina
ENSPKIG00000000875	prdm4	99	60.285	ENSMLEG00000039607	PRDM4	99	59.572	Mandrillus_leucophaeus
ENSPKIG00000000875	prdm4	99	56.325	ENSMGAG00000012815	PRDM4	99	56.295	Meleagris_gallopavo
ENSPKIG00000000875	prdm4	99	60.166	ENSMICG00000007807	PRDM4	99	59.334	Microcebus_murinus
ENSPKIG00000000875	prdm4	100	59.763	ENSMOCG00000000753	Prdm4	99	59.527	Microtus_ochrogaster
ENSPKIG00000000875	prdm4	99	59.264	ENSMUSG00000035529	Prdm4	99	59.026	Mus_musculus
ENSPKIG00000000875	prdm4	99	59.857	MGP_PahariEiJ_G0031398	Prdm4	99	59.264	Mus_pahari
ENSPKIG00000000875	prdm4	99	59.857	MGP_SPRETEiJ_G0016505	Prdm4	99	59.264	Mus_spretus
ENSPKIG00000000875	prdm4	99	55.213	ENSMPUG00000012238	PRDM4	99	55.213	Mustela_putorius_furo
ENSPKIG00000000875	prdm4	99	60.833	ENSMLUG00000000767	PRDM4	99	60.476	Myotis_lucifugus
ENSPKIG00000000875	prdm4	99	59.976	ENSNGAG00000018627	Prdm4	99	59.620	Nannospalax_galili
ENSPKIG00000000875	prdm4	99	60.404	ENSNLEG00000006748	PRDM4	99	59.691	Nomascus_leucogenys
ENSPKIG00000000875	prdm4	88	63.697	ENSMEUG00000004495	PRDM4	86	63.697	Notamacropus_eugenii
ENSPKIG00000000875	prdm4	82	67.961	ENSOPRG00000010192	PRDM4	88	61.096	Ochotona_princeps
ENSPKIG00000000875	prdm4	100	59.360	ENSODEG00000014750	PRDM4	99	59.286	Octodon_degus
ENSPKIG00000000875	prdm4	93	62.977	ENSOANG00000005526	PRDM4	99	60.570	Ornithorhynchus_anatinus
ENSPKIG00000000875	prdm4	93	60.573	ENSOCUG00000012859	PRDM4	96	60.573	Oryctolagus_cuniculus
ENSPKIG00000000875	prdm4	99	60.166	ENSOGAG00000011945	PRDM4	99	59.453	Otolemur_garnettii
ENSPKIG00000000875	prdm4	99	60.451	ENSOARG00000017955	PRDM4	99	60.570	Ovis_aries
ENSPKIG00000000875	prdm4	99	60.523	ENSPPAG00000038438	PRDM4	99	59.810	Pan_paniscus
ENSPKIG00000000875	prdm4	99	60.285	ENSPPRG00000004144	PRDM4	99	60.285	Panthera_pardus
ENSPKIG00000000875	prdm4	99	60.285	ENSPTIG00000005847	PRDM4	99	60.285	Panthera_tigris_altaica
ENSPKIG00000000875	prdm4	99	60.523	ENSPTRG00000005400	PRDM4	99	59.810	Pan_troglodytes
ENSPKIG00000000875	prdm4	99	60.404	ENSPANG00000022084	PRDM4	99	59.691	Papio_anubis
ENSPKIG00000000875	prdm4	81	69.780	ENSPSIG00000012066	PRDM4	99	69.780	Pelodiscus_sinensis
ENSPKIG00000000875	prdm4	99	60.095	ENSPEMG00000014598	Prdm4	99	59.857	Peromyscus_maniculatus_bairdii
ENSPKIG00000000875	prdm4	99	60.523	ENSPCIG00000009471	PRDM4	99	59.929	Phascolarctos_cinereus
ENSPKIG00000000875	prdm4	99	60.285	ENSPPYG00000004913	PRDM4	99	59.572	Pongo_abelii
ENSPKIG00000000875	prdm4	83	61.364	ENSPCAG00000009987	PRDM4	82	61.364	Procavia_capensis
ENSPKIG00000000875	prdm4	99	60.166	ENSPCOG00000021060	PRDM4	99	59.334	Propithecus_coquereli
ENSPKIG00000000875	prdm4	99	60.166	ENSPVAG00000001596	PRDM4	99	60.166	Pteropus_vampyrus
ENSPKIG00000000875	prdm4	99	59.976	ENSRNOG00000004962	Prdm4	99	59.953	Rattus_norvegicus
ENSPKIG00000000875	prdm4	99	60.404	ENSRBIG00000035488	PRDM4	99	59.691	Rhinopithecus_bieti
ENSPKIG00000000875	prdm4	99	60.404	ENSRROG00000012779	PRDM4	99	59.691	Rhinopithecus_roxellana
ENSPKIG00000000875	prdm4	92	76.068	ENSSBOG00000000403	PRDM4	93	74.790	Saimiri_boliviensis_boliviensis
ENSPKIG00000000875	prdm4	99	83.985	ENSSFOG00015023358	prdm4	99	84.108	Scleropages_formosus
ENSPKIG00000000875	prdm4	99	60.214	ENSSSCG00000000160	PRDM4	99	60.095	Sus_scrofa
ENSPKIG00000000875	prdm4	99	59.382	ENSTGUG00000010962	-	99	59.739	Taeniopygia_guttata
ENSPKIG00000000875	prdm4	81	53.312	ENSTBEG00000001732	PRDM4	84	52.989	Tupaia_belangeri
ENSPKIG00000000875	prdm4	99	60.570	ENSTTRG00000011056	PRDM4	99	60.451	Tursiops_truncatus
ENSPKIG00000000875	prdm4	99	60.523	ENSUAMG00000022796	PRDM4	99	60.523	Ursus_americanus
ENSPKIG00000000875	prdm4	99	60.523	ENSUMAG00000017231	PRDM4	99	60.523	Ursus_maritimus
ENSPKIG00000000875	prdm4	99	60.451	ENSVPAG00000002215	PRDM4	99	60.333	Vicugna_pacos
ENSPKIG00000000875	prdm4	99	60.285	ENSVVUG00000023397	PRDM4	99	60.285	Vulpes_vulpes